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PDB: 705 件

9IK1
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Cryo-EM structure of the human P2X3 receptor-compound 26a complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-[2-cyclopropyl-7-[[(1~{R})-1-naphthalen-2-ylethyl]amino]-[1,2,4]triazolo[1,5-a]pyrimidin-5-yl]piperazine-1-carboxamide, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Kim, S, Kim, G.R, Kim, Y.O, Han, X, Nagel, J, Kim, J, Song, D.I, Muller, C.E, Yoon, M.H, Jin, M.S, Kim, Y.C.
登録日2024-06-26
公開日2024-09-04
実験手法ELECTRON MICROSCOPY (2.61 Å)
主引用文献Discovery of Triazolopyrimidine Derivatives as Selective P2X3 Receptor Antagonists Binding to an Unprecedented Allosteric Site as Evidenced by Cryo-Electron Microscopy.
J.Med.Chem., 67, 2024
6L33
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Crystal structure of the regulatory domain of MexT, a transcriptional activator in Pseudomonas aeruginosa
分子名称: MexT protein, SULFATE ION
著者Kim, S, Ha, N.-C.
登録日2019-10-08
公開日2019-10-30
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of the Regulatory Domain of MexT, a Transcriptional Activator of the MexEFOprN Efflux Pump inPseudomonas aeruginosa.
Mol.Cells, 42, 2019
1HPB
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THE BACTERIAL PERIPLASMIC HISTIDINE-BINDING PROTEIN: STRUCTURE(SLASH)FUNCTION ANALYSIS OF THE LIGAND-BINDING SITE AND COMPARISON WITH RELATED PROTEINS
分子名称: HISTIDINE, HISTIDINE-BINDING PROTEIN
著者Kim, S.H, Oh, B.H.
登録日1993-09-30
公開日1995-01-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The bacterial periplasmic histidine-binding protein. structure/function analysis of the ligand-binding site and comparison with related proteins.
J.Biol.Chem., 269, 1994
2Q21
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BU of 2q21 by Molmil
CRYSTAL STRUCTURES AT 2.2 ANGSTROMS RESOLUTION OF THE CATALYTIC DOMAINS OF NORMAL RAS PROTEIN AND AN ONCOGENIC MUTANT COMPLEXED WITH GSP
分子名称: C-H-RAS P21 PROTEIN CATALYTIC DOMAIN, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
著者Kim, S.-H.
登録日1991-09-25
公開日1992-07-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures at 2.2 A resolution of the catalytic domains of normal ras protein and an oncogenic mutant complexed with GDP.
J.Mol.Biol., 217, 1991
4UZ0
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BU of 4uz0 by Molmil
Crystal Structure of apoptosis repressor with CARD (ARC)
分子名称: GLYCEROL, NUCLEOLAR PROTEIN 3
著者Kim, S.H, Jeong, J.H, Jang, T.H, Kim, Y.G, Park, H.H.
登録日2014-09-04
公開日2015-07-01
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.399 Å)
主引用文献Crystal Structure of Caspase Recruiting Domain (Card) of Apoptosis Repressor with Card (Arc) and its Implication in Inhibition of Apoptosis.
Sci.Rep., 5, 2015
1HP7
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BU of 1hp7 by Molmil
A 2.1 ANGSTROM STRUCTURE OF AN UNCLEAVED ALPHA-1-ANTITRYPSIN SHOWS VARIABILITY OF THE REACTIVE CENTER AND OTHER LOOPS
分子名称: ALPHA-1-ANTITRYPSIN, BETA-MERCAPTOETHANOL, ZINC ION
著者Kim, S.-J, Woo, J.-R, Seo, E.J, Yu, M.-H, Ryu, S.-E.
登録日2000-12-12
公開日2001-03-14
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A 2.1 A resolution structure of an uncleaved alpha(1)-antitrypsin shows variability of the reactive center and other loops.
J.Mol.Biol., 306, 2001
7Y28
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BU of 7y28 by Molmil
Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
分子名称: 1-[6-(3-fluorophenyl)benzimidazol-1-yl]-3-[(2R,3S)-3-oxidanylpiperidin-2-yl]propan-2-one, ADENOSINE-5'-TRIPHOSPHATE, Bifunctional glutamate/proline--tRNA ligase, ...
著者Kim, S, Yoon, I, Son, J, Park, S, Hwang, K.Y.
登録日2022-06-09
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Control of fibrosis with enhanced safety via asymmetric inhibition of prolyl-tRNA synthetase 1.
Embo Mol Med, 15, 2023
7Y1H
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Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
分子名称: 1-(5-chloranyl-4-methyl-benzimidazol-1-yl)-3-[(2R,3S)-3-oxidanylpiperidin-2-yl]propan-2-one, ADENOSINE-5'-TRIPHOSPHATE, Bifunctional glutamate/proline--tRNA ligase, ...
著者Kim, S, Yoon, I, Son, J, Park, S, Hwang, K.Y.
登録日2022-06-08
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Control of fibrosis with enhanced safety via asymmetric inhibition of prolyl-tRNA synthetase 1.
Embo Mol Med, 15, 2023
7Y1W
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Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
分子名称: (2R,3S)-2-[3-[4,5-bis(chloranyl)benzimidazol-1-yl]propyl]piperidin-3-ol, ADENOSINE-5'-TRIPHOSPHATE, Bifunctional glutamate/proline--tRNA ligase, ...
著者Kim, S, Yoon, I, Son, J, Park, S, Hwang, K.Y.
登録日2022-06-09
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Control of fibrosis with enhanced safety via asymmetric inhibition of prolyl-tRNA synthetase 1.
Embo Mol Med, 15, 2023
7Y3S
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BU of 7y3s by Molmil
Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
分子名称: 1-(6-bromanyl-7-methyl-imidazo[4,5-b]pyridin-3-yl)-3-[(2R,3S)-3-oxidanylpiperidin-2-yl]propan-2-one, ADENOSINE-5'-TRIPHOSPHATE, Bifunctional glutamate/proline--tRNA ligase, ...
著者Kim, S, Yoon, I, Son, J, Park, S, Hwang, K.Y.
登録日2022-06-12
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Control of fibrosis with enhanced safety via asymmetric inhibition of prolyl-tRNA synthetase 1.
Embo Mol Med, 15, 2023
4WYS
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BU of 4wys by Molmil
Crystal structure of thiolase from Escherichia coli
分子名称: Acetyl-CoA acetyltransferase
著者Kim, S, Ha, S.C, Ahn, J.W, Kim, E.J, Lim, J.H, Kim, K.J.
登録日2014-11-18
公開日2015-10-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Redox-switch regulatory mechanism of thiolase from Clostridium acetobutylicum
Nat Commun, 6, 2015
4WYR
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Crystal structure of thiolase mutation (V77Q,N153Y,A286K) from Clostridium acetobutylicum
分子名称: Acetyl-CoA acetyltransferase, DI(HYDROXYETHYL)ETHER, GLYCEROL
著者Kim, S, Ha, S.C, Ahn, J.W, Kim, E.J, Lim, J.H, Kim, K.J.
登録日2014-11-18
公開日2015-10-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Redox-switch regulatory mechanism of thiolase from Clostridium acetobutylicum
Nat Commun, 6, 2015
4XL4
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Crystal structure of thiolase from Clostridium acetobutylicum in complex with CoA
分子名称: Acetyl-CoA acetyltransferase, COENZYME A, GLYCEROL
著者Kim, S, Ha, S.C, Ahn, J.W, Kim, E.J, Lim, J.H, Kim, K.J.
登録日2015-01-13
公開日2015-10-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Redox-switch regulatory mechanism of thiolase from Clostridium acetobutylicum
Nat Commun, 6, 2015
4XL2
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BU of 4xl2 by Molmil
Crystal structure of oxidized form of thiolase from Clostridium acetobutylicum
分子名称: ACETATE ION, Acetyl-CoA acetyltransferase, DI(HYDROXYETHYL)ETHER, ...
著者Kim, S, Ha, S.C, Ahn, J.W, Kim, E.J, Lim, J.H, Kim, K.J.
登録日2015-01-13
公開日2015-10-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Redox-switch regulatory mechanism of thiolase from Clostridium acetobutylicum
Nat Commun, 6, 2015
4XL3
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BU of 4xl3 by Molmil
Crystal structure of reduced form of thiolase from Clostridium acetobutylicum
分子名称: Acetyl-CoA acetyltransferase, GLYCEROL
著者Kim, S, Ha, S.C, Ahn, J.W, Kim, E.J, Lim, J.H, Kim, K.J.
登録日2015-01-13
公開日2015-10-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Redox-switch regulatory mechanism of thiolase from Clostridium acetobutylicum
Nat Commun, 6, 2015
7YA3
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BU of 7ya3 by Molmil
Formate dehydrogenase from Novosphingobium sp. AP12 with NADP and Azide
分子名称: AZIDE ION, Formate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Kim, S, Kim, K.-J.
登録日2022-06-27
公開日2023-07-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Dual cofactor specific formate dehydrogenase from Novosphingobium sp. AP12 with high activity.
To Be Published
7YA4
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Formate dehydrogenase from Novosphingobium sp. AP12 with NAD and Azide
分子名称: 1,2-ETHANEDIOL, ACETATE ION, AZIDE ION, ...
著者Kim, S, Kim, K.-J.
登録日2022-06-27
公開日2023-07-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Dual cofactor specific formate dehydrogenase from Novosphingobium sp. AP12 with high activity.
To Be Published
8I70
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BU of 8i70 by Molmil
Crystal structure of NADP-binding form of malonyl-CoA reductase C-domain from Chloroflexus aurantiacus
分子名称: GLYCEROL, L(+)-TARTARIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Kim, S, Kim, K.-J.
登録日2023-01-30
公開日2023-06-14
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Cryo-EM structure of bifunctional malonyl-CoA reductase from Chloroflexus aurantiacus reveals a dynamic domain movement for high enzymatic activity.
Int.J.Biol.Macromol., 242, 2023
4XGS
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BU of 4xgs by Molmil
Crystal structure analysis of novel iron uptake mechanism of Gram-negative bacterial ferritin
分子名称: Ferritin, GLYCEROL, HYDROXY DIIRON-OXO MOIETY, ...
著者Kim, S.
登録日2015-01-02
公開日2016-07-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural Basis of Novel Iron-Uptake Route and Reaction Intermediates in Ferritins from Gram-Negative Bacteria
J. Mol. Biol., 428, 2016
8I6Z
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BU of 8i6z by Molmil
Crystal structure of apo-form of malonyl-CoA reductase C-domain from Chloroflexus aurantiacus
分子名称: GLYCEROL, L(+)-TARTARIC ACID, Short-chain dehydrogenase/reductase SDR
著者Kim, S, Kim, K.-J.
登録日2023-01-30
公開日2023-06-14
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Cryo-EM structure of bifunctional malonyl-CoA reductase from Chloroflexus aurantiacus reveals a dynamic domain movement for high enzymatic activity.
Int.J.Biol.Macromol., 242, 2023
132D
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BU of 132d by Molmil
SOLUTION STRUCTURE OF THE TN AN DNA DUPLEX GCCGTTAACGGC CONTAINING THE HPA I RESTRICTION SITE
分子名称: DNA (5'-D(P*GP*CP*CP*GP*TP*TP*AP*AP*CP*GP*GP*C)-3')
著者Kim, S.-G, Reid, B.R.
登録日1993-06-24
公開日1994-01-31
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the TnAn DNA duplex GCCGTTAACGCG containing the HpaI restriction site.
Biochemistry, 31, 1992
7VG4
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BU of 7vg4 by Molmil
10,5-methenyltetrahydrofolate cyclohydrolase from Methylobacterium extorquens AM1 strain
分子名称: Methenyltetrahydrofolate cyclohydrolase
著者Kim, S, Lee, S, Kim, I.-K, Seo, H, Kim, K.-J.
登録日2021-09-14
公開日2022-07-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Structural insight into a molecular mechanism of methenyltetrahydrofolate cyclohydrolase from Methylobacterium extorquens AM1.
Int.J.Biol.Macromol., 202, 2022
7VG5
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BU of 7vg5 by Molmil
10,5-methenyltetrahydrofolate cyclohydrolase from Methylobacterium extorquens AM1 with tetrahydrofolate
分子名称: (6S)-5,6,7,8-TETRAHYDROFOLATE, Methenyltetrahydrofolate cyclohydrolase
著者Kim, S, Lee, S, Kim, I.-K, Seo, H, Kim, K.-J.
登録日2021-09-14
公開日2022-07-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural insight into a molecular mechanism of methenyltetrahydrofolate cyclohydrolase from Methylobacterium extorquens AM1.
Int.J.Biol.Macromol., 202, 2022
4JDY
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BU of 4jdy by Molmil
Crystal structure of Rv2606c
分子名称: GLYCEROL, Pyridoxal biosynthesis lyase PdxS
著者Kim, S, Kim, K.-J.
登録日2013-02-25
公開日2013-05-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Mycobacterium tuberculosis Rv2606c: a pyridoxal biosynthesis lyase.
Biochem.Biophys.Res.Commun., 435, 2013
4KDL
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BU of 4kdl by Molmil
Crystal structure of p97/VCP N in complex with OTU1 UBXL
分子名称: Transitional endoplasmic reticulum ATPase, Ubiquitin thioesterase OTU1
著者Kim, S.J, Kim, E.E.
登録日2013-04-25
公開日2014-03-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structural Basis for Ovarian Tumor Domain-containing Protein 1 (OTU1) Binding to p97/Valosin-containing Protein (VCP).
J.Biol.Chem., 289, 2014

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件を2024-10-30に公開中

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