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PDB: 230 results

7E3Q
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BU of 7e3q by Molmil
Crystal structure of SAH bound TrmL from Vibrio vulnificus
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, tRNA (cytidine(34)-2'-O)-methyltransferase
Authors:Kim, J, Son, J.
Deposit date:2021-02-09
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of SAH bound TrmL from Vibrio vulnificus
To Be Published
7E3R
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BU of 7e3r by Molmil
Crystal structure of TrmL from Vibrio vulnificus
Descriptor: tRNA (cytidine(34)-2'-O)-methyltransferase
Authors:Kim, J, Son, J.
Deposit date:2021-02-09
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structure of tRNA mehtyltransferase TrmL from Vibrio vulnificus
To be published
7E3T
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BU of 7e3t by Molmil
Crystal structure of TrmL from Mycoplasma capricolum
Descriptor: Putative tRNA (cytidine(34)-2'-O)-methyltransferase
Authors:Kim, J, Son, J.
Deposit date:2021-02-09
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of TrmL from Mycoplasma capricolum
To Be Published
7E3S
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BU of 7e3s by Molmil
Crystal structure of TrmL from Shewanella oneidensis
Descriptor: tRNA (cytidine(34)-2'-O)-methyltransferase
Authors:Kim, J, Son, J.
Deposit date:2021-02-09
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of TrmL from Shewanella oneidensis
To be Published
2OB3
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BU of 2ob3 by Molmil
Structure of Phosphotriesterase mutant H257Y/L303T
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Parathion hydrolase, ZINC ION
Authors:Kim, J, Ramagopal, U.A, Tsai, P, Raushel, F.M, Almo, S.C.
Deposit date:2006-12-18
Release date:2007-01-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Structure of Phosphotriesterase mutant H257Y/L303T
To be Published
2O4M
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BU of 2o4m by Molmil
Structure of Phosphotriesterase mutant I106G/F132G/H257Y
Descriptor: ACETIC ACID, CACODYLATE ION, GLYCEROL, ...
Authors:Kim, J, Ramagopal, U.A, Tsai, P, Raushel, F.M, Almo, S.C.
Deposit date:2006-12-04
Release date:2007-12-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structure of Phosphotriesterase mutant I106G/F132G/H257Y
To be Published
2O4Q
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BU of 2o4q by Molmil
Structure of Phosphotriesterase mutant G60A
Descriptor: CACODYLATE ION, Parathion hydrolase, ZINC ION
Authors:Kim, J, Ramagopal, U.A, Tsai, P.C, Raushel, F.M, Almo, S.C.
Deposit date:2006-12-04
Release date:2007-12-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of diethyl phosphate bound to the binuclear metal center of phosphotriesterase.
Biochemistry, 47, 2008
4NAV
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BU of 4nav by Molmil
Crystal structure of hypothetical protein XCC2798 from Xanthomonas campestris, Target EFI-508608
Descriptor: HYPOTHETICAL PROTEIN XCC279
Authors:Kim, J, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Washington, E, Glenn, A.S, Chowdhury, S, Evans, B, Zhao, S.C, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Stead, M, Jacobson, M.P, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-10-22
Release date:2013-11-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Crystal structure of hypothetical protein XCC2798 from Xanthomonas campestris, Target EFI-508608
TO BE PUBLISHED
2OQL
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BU of 2oql by Molmil
Structure of Phosphotriesterase mutant H254Q/H257F
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Parathion hydrolase, ...
Authors:Kim, J, Tsai, P, Raushel, F.M, Almo, S.C.
Deposit date:2007-01-31
Release date:2008-02-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of PTE mutant H254Q/H257F
To be Published
4N0V
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BU of 4n0v by Molmil
Crystal structure of a glutathione S-transferase domain-containing protein (Marinobacter aquaeolei VT8), Target EFI-507332
Descriptor: Glutathione S-transferase, N-terminal domain
Authors:Kim, J, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Washington, E, Glenn, A.S, Chowdhury, S, Evans, B, Zhao, S.C, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Stead, M, Jacobson, M.P, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-10-02
Release date:2013-10-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of a glutathione S-transferase domain-containing protein (Marinobacter aquaeolei VT8), Target EFI-507332
TO BE PUBLISHED
4O7H
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BU of 4o7h by Molmil
Crystal structure of a glutathione S-transferase from Rhodospirillum rubrum F11, Target EFI-507460
Descriptor: Glutathione S-transferase
Authors:Kim, J, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Stead, M, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Attonito, J.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-12-24
Release date:2014-01-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a glutathione S-transferase from Rhodospirillum rubrum F11, Target EFI-507460
TO BE PUBLISHED
4O92
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BU of 4o92 by Molmil
Crystal structure of a Glutathione S-transferase from Pichia kudriavzevii (Issatchenkia orientalis), target EFI-501747
Descriptor: Glutathione S-transferase, SULFATE ION
Authors:Kim, J, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Washington, E, Glenn, A.S, Chowdhury, S, Evans, B, Stead, M, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Attonito, J.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-12-31
Release date:2014-01-15
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Crystal structure of a Glutathione S-transferase from Pichia kudriavzevii (Issatchenkia orientalis), target EFI-501747
TO BE PUBLISHED
4PTS
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BU of 4pts by Molmil
Crystal structure of a glutathione transferase from Gordonia bronchialis DSM 43247, target EFI-507405
Descriptor: glutathione S-transferase
Authors:Kim, J, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-03-11
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Crystal structure of a glutathione transferase from Gordonia bronchialis DSM 43247, target EFI-507405
To be Published
4PUA
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BU of 4pua by Molmil
Crystal Structure Of glutathione transferase YghU from Streptococcus pneumoniae ATCC 700669, complexed with glutathione, Target EFI-507284
Descriptor: GLUTATHIONE, glutathione S-transferase
Authors:Kim, J, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Stead, M, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-03-12
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.708 Å)
Cite:Crystal Structure Of glutathione transferase YghU from Streptococcus pneumoniae ATCC 700669, complexed with glutathione, Target EFI-507284
To be Published
4GEK
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BU of 4gek by Molmil
Crystal Structure of wild-type CmoA from E.coli
Descriptor: (2S)-4-[{[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}(carboxylatomethyl)sulfonio] -2-ammoniobutanoate, SULFATE ION, tRNA (cmo5U34)-methyltransferase
Authors:Kim, J, Toro, R, Bonanno, J.B, Bhosle, R, Sampathkumar, P, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-08-02
Release date:2012-10-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure-guided discovery of the metabolite carboxy-SAM that modulates tRNA function
Nature, 498, 2013
6JCM
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BU of 6jcm by Molmil
Crystal structure of ligand-free Rv0187.
Descriptor: ACETATE ION, Probable O-methyltransferase
Authors:Kim, J, Lee, S.
Deposit date:2019-01-29
Release date:2019-12-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structural and biochemical characterization of Rv0187, an O-methyltransferase from Mycobacterium tuberculosis.
Sci Rep, 9, 2019
6JCL
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BU of 6jcl by Molmil
Crystal structure of cofactor-bound Rv0187 from MTB
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Probable O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Kim, J, Lee, S.
Deposit date:2019-01-29
Release date:2019-12-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.644 Å)
Cite:Structural and biochemical characterization of Rv0187, an O-methyltransferase from Mycobacterium tuberculosis.
Sci Rep, 9, 2019
4GRA
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BU of 4gra by Molmil
Crystal structure of SULT1A1 bound with PAP
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, Sulfotransferase 1A1
Authors:Kim, J, Cook, I, Wang, T, Falany, C.N, Leyh, T.S, Almo, S.C.
Deposit date:2012-08-24
Release date:2013-01-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:The gate that governs sulfotransferase selectivity.
Biochemistry, 52, 2013
4IFB
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BU of 4ifb by Molmil
Crystal structure of SULT 2A1 LLGG mutant with PAPS
Descriptor: 3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE, Bile salt sulfotransferase, PHOSPHATE ION, ...
Authors:Kim, J, Toro, R, Bhosle, R, Cook, I, Wang, T, Falany, C.N, Leyh, T.S, Almo, S.C.
Deposit date:2012-12-14
Release date:2013-02-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Sulfotransferase Selectivity at the Molecular level
To be Published
4KDZ
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BU of 4kdz by Molmil
Crystal structure of tRNA/rRNA methyltransferase YibK from Escherichia coli (Target NYSGRC-012599)
Descriptor: tRNA (cytidine(34)-2'-O)-methyltransferase
Authors:Kim, J, Toro, R, Bhosle, R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-04-25
Release date:2013-08-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Crystal structure of tRNA/rRNA methyltransferase YibK from Escherichia coli (Target NYSGRC-012599)
To be Published
3CAK
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BU of 3cak by Molmil
X-ray structure of WT PTE with ethyl phosphate
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, COBALT (II) ION, DIETHYL HYDROGEN PHOSPHATE, ...
Authors:Kim, J, Tsai, P.-C, Almo, S.C, Raushel, F.M.
Deposit date:2008-02-20
Release date:2008-10-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structure of diethyl phosphate bound to the binuclear metal center of phosphotriesterase.
Biochemistry, 47, 2008
3CS2
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BU of 3cs2 by Molmil
Crystal structure of PTE G60A mutant
Descriptor: CACODYLATE ION, COBALT (II) ION, Parathion hydrolase
Authors:Kim, J, Almo, S.C.
Deposit date:2008-04-08
Release date:2009-02-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of diethyl phosphate bound to the binuclear metal center of phosphotriesterase.
Biochemistry, 47, 2008
4QNX
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BU of 4qnx by Molmil
Crystal structure of apo-CmoB
Descriptor: SULFATE ION, tRNA (mo5U34)-methyltransferase
Authors:Kim, J, Toro, R, Bhosle, R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-06-18
Release date:2014-09-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.619 Å)
Cite:Determinants of the CmoB carboxymethyl transferase utilized for selective tRNA wobble modification.
Nucleic Acids Res., 43, 2015
4QNV
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BU of 4qnv by Molmil
Crystal structure of Cx-SAM bound CmoB from E. coli in P6122
Descriptor: (2S)-4-[{[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}(carboxylatomethyl)sulfonio] -2-ammoniobutanoate, PHOSPHATE ION, tRNA (mo5U34)-methyltransferase
Authors:Kim, J, Toro, R, Bhosle, R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-06-18
Release date:2014-09-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Determinants of the CmoB carboxymethyl transferase utilized for selective tRNA wobble modification.
Nucleic Acids Res., 43, 2015
4QNU
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BU of 4qnu by Molmil
Crystal structure of CmoB bound with Cx-SAM in P21212
Descriptor: (2S)-4-[{[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}(carboxylatomethyl)sulfonio] -2-ammoniobutanoate, PHOSPHATE ION, tRNA (mo5U34)-methyltransferase
Authors:Kim, J, Toro, R, Bhosle, R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-06-18
Release date:2014-09-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Determinants of the CmoB carboxymethyl transferase utilized for selective tRNA wobble modification.
Nucleic Acids Res., 43, 2015

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