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PDB: 230 件
4PZD
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BU of 4pzd by Molmil
Crystal structure of (S)-3-hydroxybutyryl-CoA dehydrogenase PaaH1 in complex with NAD+
分子名称: 3-Hydroxyacyl-CoA dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Kim, J, Chang, J.H, Kim, K.J.
登録日2014-03-29
公開日2015-02-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Crystal structure and biochemical properties of the (S)-3-hydroxybutyryl-CoA dehydrogenase PaaH1 from Ralstonia eutropha
Biochem.Biophys.Res.Commun., 448, 2014
2NBP
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BU of 2nbp by Molmil
Solution structure of the T119M variant of transthyretin in its monomeric state
分子名称: Transthyretin
著者Kim, J, Oroz, J, Zweckstetter, M.
登録日2016-03-09
公開日2017-05-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of Monomeric Transthyretin Carrying the Clinically Important T119M Mutation.
Angew. Chem. Int. Ed. Engl., 55, 2016
2NBO
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BU of 2nbo by Molmil
Solution structure of the F87M/L110M variant of transthyretin in the monomeric state
分子名称: Transthyretin
著者Kim, J, Oroz, J, Zweckstetter, M.
登録日2016-03-09
公開日2017-02-22
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Mechanistic basis for the recognition of a misfolded protein by the molecular chaperone Hsp90.
Nat. Struct. Mol. Biol., 24, 2017
5ZIQ
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BU of 5ziq by Molmil
Crystal structure of hexacoordinated heme protein from anhydrobiotic tardigrade at pH 4
分子名称: 1,2-ETHANEDIOL, Globin protein, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Kim, J, Fukuda, Y, Inoue, T.
登録日2018-03-16
公開日2019-01-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of Kumaglobin: a hexacoordinated heme protein from an anhydrobiotic tardigrade, Ramazzottius varieornatus.
FEBS J., 286, 2019
5ZM9
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BU of 5zm9 by Molmil
Crystal structure of hexacoordinated heme protein from anhydrobiotic tardigrade at pH 7
分子名称: CHLORIDE ION, Globin Protein, PROTOPORPHYRIN IX CONTAINING FE
著者Kim, J, Fukuda, Y, Inoue, T.
登録日2018-04-02
公開日2019-01-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of Kumaglobin: a hexacoordinated heme protein from an anhydrobiotic tardigrade, Ramazzottius varieornatus.
FEBS J., 286, 2019
6JCM
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BU of 6jcm by Molmil
Crystal structure of ligand-free Rv0187.
分子名称: ACETATE ION, Probable O-methyltransferase
著者Kim, J, Lee, S.
登録日2019-01-29
公開日2019-12-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Structural and biochemical characterization of Rv0187, an O-methyltransferase from Mycobacterium tuberculosis.
Sci Rep, 9, 2019
6JCL
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BU of 6jcl by Molmil
Crystal structure of cofactor-bound Rv0187 from MTB
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Probable O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Kim, J, Lee, S.
登録日2019-01-29
公開日2019-12-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.644 Å)
主引用文献Structural and biochemical characterization of Rv0187, an O-methyltransferase from Mycobacterium tuberculosis.
Sci Rep, 9, 2019
1ZB1
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BU of 1zb1 by Molmil
Structure basis for endosomal targeting by the Bro1 domain
分子名称: BRO1 protein
著者Kim, J, Sitaraman, S, Hierro, A, Beach, B.M, Odorizzi, G, Hurley, J.H.
登録日2005-04-07
公開日2005-06-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural basis for endosomal targeting by the Bro1 domain.
Dev.Cell, 8, 2005
4O92
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BU of 4o92 by Molmil
Crystal structure of a Glutathione S-transferase from Pichia kudriavzevii (Issatchenkia orientalis), target EFI-501747
分子名称: Glutathione S-transferase, SULFATE ION
著者Kim, J, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Washington, E, Glenn, A.S, Chowdhury, S, Evans, B, Stead, M, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Attonito, J.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2013-12-31
公開日2014-01-15
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Crystal structure of a Glutathione S-transferase from Pichia kudriavzevii (Issatchenkia orientalis), target EFI-501747
TO BE PUBLISHED
4O7H
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BU of 4o7h by Molmil
Crystal structure of a glutathione S-transferase from Rhodospirillum rubrum F11, Target EFI-507460
分子名称: Glutathione S-transferase
著者Kim, J, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Stead, M, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Attonito, J.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2013-12-24
公開日2014-01-08
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of a glutathione S-transferase from Rhodospirillum rubrum F11, Target EFI-507460
TO BE PUBLISHED
4PTS
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BU of 4pts by Molmil
Crystal structure of a glutathione transferase from Gordonia bronchialis DSM 43247, target EFI-507405
分子名称: glutathione S-transferase
著者Kim, J, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2014-03-11
公開日2014-04-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Crystal structure of a glutathione transferase from Gordonia bronchialis DSM 43247, target EFI-507405
To be Published
7EQ5
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BU of 7eq5 by Molmil
Plant growth-promoting factor YxaL mutant from Bacillus velezensis - T175W/W215G
分子名称: Membrane associated protein kinase with beta-propeller domain, pyrrolo-quinoline quinone beta-propeller repeat
著者Kim, J, Ha, N.-C.
登録日2021-04-30
公開日2022-01-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of the plant growth-promoting factor YxaL from the rhizobacterium Bacillus velezensis and its application to protein engineering.
Acta Crystallogr D Struct Biol, 78, 2022
7EVF
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BU of 7evf by Molmil
Plant growth-promoting factor YxaL mutant from Bacillus velezensis - T175W/S213G/W215A
分子名称: PQQ_3 domain-containing protein
著者Kim, J, Ha, N.-C.
登録日2021-05-21
公開日2022-01-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of the plant growth-promoting factor YxaL from the rhizobacterium Bacillus velezensis and its application to protein engineering.
Acta Crystallogr D Struct Biol, 78, 2022
4PUA
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BU of 4pua by Molmil
Crystal Structure Of glutathione transferase YghU from Streptococcus pneumoniae ATCC 700669, complexed with glutathione, Target EFI-507284
分子名称: GLUTATHIONE, glutathione S-transferase
著者Kim, J, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Stead, M, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2014-03-12
公開日2014-04-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.708 Å)
主引用文献Crystal Structure Of glutathione transferase YghU from Streptococcus pneumoniae ATCC 700669, complexed with glutathione, Target EFI-507284
To be Published
4QNX
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BU of 4qnx by Molmil
Crystal structure of apo-CmoB
分子名称: SULFATE ION, tRNA (mo5U34)-methyltransferase
著者Kim, J, Toro, R, Bhosle, R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
登録日2014-06-18
公開日2014-09-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.619 Å)
主引用文献Determinants of the CmoB carboxymethyl transferase utilized for selective tRNA wobble modification.
Nucleic Acids Res., 43, 2015
4QNU
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BU of 4qnu by Molmil
Crystal structure of CmoB bound with Cx-SAM in P21212
分子名称: (2S)-4-[{[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}(carboxylatomethyl)sulfonio] -2-ammoniobutanoate, PHOSPHATE ION, tRNA (mo5U34)-methyltransferase
著者Kim, J, Toro, R, Bhosle, R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
登録日2014-06-18
公開日2014-09-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Determinants of the CmoB carboxymethyl transferase utilized for selective tRNA wobble modification.
Nucleic Acids Res., 43, 2015
4QNV
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BU of 4qnv by Molmil
Crystal structure of Cx-SAM bound CmoB from E. coli in P6122
分子名称: (2S)-4-[{[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}(carboxylatomethyl)sulfonio] -2-ammoniobutanoate, PHOSPHATE ION, tRNA (mo5U34)-methyltransferase
著者Kim, J, Toro, R, Bhosle, R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
登録日2014-06-18
公開日2014-09-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Determinants of the CmoB carboxymethyl transferase utilized for selective tRNA wobble modification.
Nucleic Acids Res., 43, 2015
7E3R
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BU of 7e3r by Molmil
Crystal structure of TrmL from Vibrio vulnificus
分子名称: tRNA (cytidine(34)-2'-O)-methyltransferase
著者Kim, J, Son, J.
登録日2021-02-09
公開日2022-02-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Crystal structure of tRNA mehtyltransferase TrmL from Vibrio vulnificus
To be published
7E3Q
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BU of 7e3q by Molmil
Crystal structure of SAH bound TrmL from Vibrio vulnificus
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, tRNA (cytidine(34)-2'-O)-methyltransferase
著者Kim, J, Son, J.
登録日2021-02-09
公開日2022-02-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of SAH bound TrmL from Vibrio vulnificus
To Be Published
7E3T
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BU of 7e3t by Molmil
Crystal structure of TrmL from Mycoplasma capricolum
分子名称: Putative tRNA (cytidine(34)-2'-O)-methyltransferase
著者Kim, J, Son, J.
登録日2021-02-09
公開日2022-02-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of TrmL from Mycoplasma capricolum
To Be Published
7E3S
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BU of 7e3s by Molmil
Crystal structure of TrmL from Shewanella oneidensis
分子名称: tRNA (cytidine(34)-2'-O)-methyltransferase
著者Kim, J, Son, J.
登録日2021-02-09
公開日2022-02-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of TrmL from Shewanella oneidensis
To be Published
4KDZ
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BU of 4kdz by Molmil
Crystal structure of tRNA/rRNA methyltransferase YibK from Escherichia coli (Target NYSGRC-012599)
分子名称: tRNA (cytidine(34)-2'-O)-methyltransferase
著者Kim, J, Toro, R, Bhosle, R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
登録日2013-04-25
公開日2013-08-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Crystal structure of tRNA/rRNA methyltransferase YibK from Escherichia coli (Target NYSGRC-012599)
To be Published
3CS2
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BU of 3cs2 by Molmil
Crystal structure of PTE G60A mutant
分子名称: CACODYLATE ION, COBALT (II) ION, Parathion hydrolase
著者Kim, J, Almo, S.C.
登録日2008-04-08
公開日2009-02-17
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure of diethyl phosphate bound to the binuclear metal center of phosphotriesterase.
Biochemistry, 47, 2008
1PZZ
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BU of 1pzz by Molmil
Crystal structure of FGF-1, V51N mutant
分子名称: FORMIC ACID, Heparin-binding growth factor 1, SULFATE ION
著者Kim, J, Blaber, M.
登録日2003-07-14
公開日2004-07-27
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Sequence swapping does not result in conformation swapping for the beta4/beta5 and beta8/beta9 beta-hairpin turns in human acidic fibroblast growth factor
Protein Sci., 14, 2005
1Q04
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BU of 1q04 by Molmil
Crystal structure of FGF-1, S50E/V51N
分子名称: FORMIC ACID, Heparin-binding growth factor 1
著者Kim, J, Blaber, M.
登録日2003-07-15
公開日2004-07-27
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Sequence swapping does not result in conformation swapping for the beta4/beta5 and beta8/beta9 beta-hairpin turns in human acidic fibroblast growth factor
Protein Sci., 14, 2005

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