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PDB: 492 件

4RNZ
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Structure of Helicobacter pylori Csd3 from the hexagonal crystal
分子名称: Conserved hypothetical secreted protein, GLYCEROL, NICKEL (II) ION, ...
著者An, D.R, Kim, H.S, Kim, J, Im, H.N, Yoon, H.J, Yoon, J.Y, Jang, J.Y, Hesek, D, Lee, M, Mobashery, S, Kim, S.-J, Lee, B.I, Suh, S.W.
登録日2014-10-27
公開日2015-03-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structure of Csd3 from Helicobacter pylori, a cell shape-determining metallopeptidase.
Acta Crystallogr.,Sect.D, 71, 2015
4RNY
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Structure of Helicobacter pylori Csd3 from the orthorhombic crystal
分子名称: Conserved hypothetical secreted protein, GLYCEROL, SULFATE ION, ...
著者An, D.R, Kim, H.S, Kim, J, Im, H.N, Yoon, H.J, Yoon, J.Y, Jang, J.Y, Hesek, D, Lee, M, Mobashery, S, Kim, S.-J, Lee, B.I, Suh, S.W.
登録日2014-10-27
公開日2015-03-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of Csd3 from Helicobacter pylori, a cell shape-determining metallopeptidase.
Acta Crystallogr.,Sect.D, 71, 2015
1DL4
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THE SOLUTION STRUCTURE OF A BAY-REGION 1S-BENZ[A]ANTHRACENE OXIDE ADDUCT AT THE N6 POSITION OF ADENINE OF AN OLIGODEOXYNUCLEOTIDE CONTAINING THE HUMAN N-RAS CODON 61 SEQUENCE
分子名称: 1R,2S,3R,4S-TETRAHYDRO-BENZO[A]ANTHRACENE-2,3,4-TRIOL, DNA (5'-D(*CP*GP*GP*AP*CP*(BZA)AP*AP*GP*AP*AP*G)-3'), DNA (5'-D(*CP*TP*TP*CP*TP*TP*GP*TP*CP*CP*G)-3')
著者Li, Z, Kim, H.-Y, Tamura, P.J, Harris, C.M, Harris, T.M, Stone, M.P.
登録日1999-12-08
公開日2000-01-12
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Intercalation of the (1S,2R,3S,4R)-N6-[1-(1,2,3,4-tetrahydro-2,3, 4-trihydroxybenz[a]anthracenyl)]-2'-deoxyadenosyl adduct in an oligodeoxynucleotide containing the human N-ras codon 61 sequence.
Biochemistry, 38, 1999
1DJD
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THE SOLUTION STRUCTURE OF A NON-BAY REGION 11R-BENZ[A]ANTHRACENE OXIDE ADDUCT AT THE N6 POSITION OF ADENINE OF AN OLIGODEOXYNUCLEOTIDE CONTAINING THE HUMAN N-RAS CODON 61 SEQUENCE
分子名称: 8,9,10,11-TETRAHYDRO-BENZO[A]ANTHRACENE-8,9,10-TRIOL, DNA(5'-D(*CT*GT*GT*AT*CT*AT*AT*GT*AT*AT*G)-3'), DNA(5'-D(*CT*TT*TT*CT*TT*TT*GT*TT*CT*CT*G)-3')
著者Li, Z, Kim, H.Y, Tamura, P.J, Harris, C.M, Harris, T.M, Stone, M.P.
登録日1999-12-02
公開日1999-12-16
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Role of a polycyclic aromatic hydrocarbon bay region ring in modulating DNA adduct structure: the non-bay region (8S,9R,10S, 11R)-N(6)-[11-(8,9,10,11-tetrahydro-8,9, 10-trihydroxybenz[a]anthracenyl)]-2' -deoxyadenosyl adduct in codon 61 of the human N-ras protooncogene
Biochemistry, 38, 1999
4UIP
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BU of 4uip by Molmil
The complex structure of extracellular domain of EGFR with Repebody (rAC1).
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, EPIDERMAL GROWTH FACTOR RECEPTOR, ...
著者Kang, Y.J, Cha, Y.J, Cho, H.S, Lee, J.J, Kim, H.S.
登録日2015-03-31
公開日2015-11-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Enzymatic Prenylation and Oxime Ligation for the Synthesis of Stable and Homogeneous Protein-Drug Conjugates for Targeted Therapy.
Angew.Chem.Int.Ed.Engl., 54, 2015
5JCM
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BU of 5jcm by Molmil
Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, ISOASCORBIC ACID, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Park, A.K, Kim, H.W.
登録日2016-04-15
公開日2016-10-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica
Sci Rep, 6, 2016
5JCN
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Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica
分子名称: ASCORBIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Park, A.K, Kim, H.W.
登録日2016-04-15
公開日2016-10-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica
Sci Rep, 6, 2016
5JCL
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Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Os09g0567300 protein
著者Park, A.K, Kim, H.W.
登録日2016-04-15
公開日2016-10-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica
Sci Rep, 6, 2016
5J4F
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Crystal structure of the N-terminally His6-tagged HP0902, an uncharacterized protein from Helicobacter pylori 26695
分子名称: Uncharacterized protein
著者Sim, D.-W, Lee, W.-C, Kim, H.Y, Kim, J.-H, Won, H.-S.
登録日2016-04-01
公開日2017-02-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural identification of the lipopolysaccharide-binding capability of a cupin-family protein from Helicobacter pylori
FEBS Lett., 590, 2016
5JCI
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BU of 5jci by Molmil
Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Os09g0567300 protein
著者Park, A.K, Kim, H.W.
登録日2016-04-15
公開日2016-10-12
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica
Sci Rep, 6, 2016
5JCK
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BU of 5jck by Molmil
Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Os09g0567300 protein
著者Park, A.K, Kim, H.W.
登録日2016-04-15
公開日2016-10-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica
Sci Rep, 6
5J4G
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BU of 5j4g by Molmil
Crystal structure of the C-terminally His6-tagged HP0902, an uncharacterized protein from Helicobacter pylori 26695
分子名称: Uncharacterized protein
著者Sim, D.W, Lee, W.C, Kim, H.Y, Kim, J.H, Won, H.S.
登録日2016-04-01
公開日2017-02-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural identification of the lipopolysaccharide-binding capability of a cupin-family protein from Helicobacter pylori
FEBS Lett., 590, 2016
5K52
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BU of 5k52 by Molmil
Crystal structures of aldehyde deformylating oxygenase from Limnothrix sp. KNUA012
分子名称: Aldehyde decarbonylase, octadecanal
著者Park, A.K, Kim, H-.W.
登録日2016-05-23
公開日2017-03-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures of aldehyde deformylating oxygenase from Limnothrix sp. KNUA012 and Oscillatoria sp. KNUA011.
Biochem. Biophys. Res. Commun., 477, 2016
5K53
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Crystal structures of aldehyde deformylating oxygenase from Oscillatoria sp. KNUA011
分子名称: FE (III) ION, STEARIC ACID, aldehyde deformylating oxygenase
著者Park, A.K, Kim, H-.W.
登録日2016-05-23
公開日2016-09-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of aldehyde deformylating oxygenase from Limnothrix sp. KNUA012 and Oscillatoria sp. KNUA011.
Biochem.Biophys.Res.Commun., 477, 2016
8GTM
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BU of 8gtm by Molmil
Corticotropin-releasing hormone receptor 1(CRF1R) bound with BMK-C203 by XFEL
分子名称: 7-(4-bromanyl-2,6-dimethoxy-phenyl)-4,8-dimethyl-~{N},~{N}-bis[4,4,4-tris(fluoranyl)butyl]-1$l^{4},3,5,9-tetrazabicyclo[4.3.0]nona-1(6),2,4,8-tetraen-2-amine, Endolysin, Isoform CRF-R2 of Corticotropin-releasing factor receptor 1
著者Cho, H.S, Kim, H.
登録日2022-09-08
公開日2023-09-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure-based drug discovery of a corticotropin-releasing hormone receptor 1 antagonist using an X-ray free-electron laser.
Exp.Mol.Med., 55, 2023
8GTG
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Corticotropin-releasing hormone receptor 1(CRF1R) bound with BMK-I-152 by XFEL
分子名称: 8-(4-bromanyl-2,6-dimethoxy-phenyl)-~{N},~{N}-bis(2-methoxyethyl)-2,7-dimethyl-pyrazolo[1,5-a][1,3,5]triazin-4-amine, Endolysin, Isoform CRF-R2 of Corticotropin-releasing factor receptor 1
著者Cho, H.S, Kim, H.
登録日2022-09-08
公開日2023-09-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structure-based drug discovery of a corticotropin-releasing hormone receptor 1 antagonist using an X-ray free-electron laser.
Exp.Mol.Med., 55, 2023
8GTI
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BU of 8gti by Molmil
Corticotropin-releasing hormone receptor 1(CRF1R) bound with BMK-C205 by XFEL
分子名称: 8-(4-bromanyl-2,6-dimethoxy-phenyl)-~{N}-butyl-~{N}-(cyclopropylmethyl)-2,7-dimethyl-pyrazolo[1,5-a][1,3,5]triazin-4-amine, Endolysin, Isoform CRF-R2 of Corticotropin-releasing factor receptor 1, ...
著者Cho, H.S, Kim, H.
登録日2022-09-08
公開日2023-09-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure-based drug discovery of a corticotropin-releasing hormone receptor 1 antagonist using an X-ray free-electron laser.
Exp.Mol.Med., 55, 2023
8KHM
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BU of 8khm by Molmil
Crystal structure of human methionine aminopeptidase 12 (MAP12) in the unbound form
分子名称: GLYCEROL, Methionine aminopeptidase 1D, mitochondrial, ...
著者Lee, Y, Lee, E, Hahn, H, Kim, H, Heo, Y, Jang, D.M, Kim, H.J, Kim, H.S.
登録日2023-08-22
公開日2024-01-24
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Structural insights into N-terminal methionine cleavage by the human mitochondrial methionine aminopeptidase, MetAP1D.
Sci Rep, 13, 2023
8KHO
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BU of 8kho by Molmil
Crystal structure of human methionine aminopeptidase 12 (MAP12) in complex with two Cobalt ions and Methionine
分子名称: COBALT (II) ION, METHIONINE, Methionine aminopeptidase 1D, ...
著者Lee, Y, Lee, E, Hahn, H, Kim, H, Heo, Y, Jang, D.M, Kim, H.J, Kim, H.S.
登録日2023-08-22
公開日2024-01-24
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural insights into N-terminal methionine cleavage by the human mitochondrial methionine aminopeptidase, MetAP1D.
Sci Rep, 13, 2023
8KHN
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BU of 8khn by Molmil
Crystal structure of human methionine aminopeptidase 12 (MAP12) in complex with two cobalt ions
分子名称: COBALT (II) ION, Methionine aminopeptidase 1D, mitochondrial, ...
著者Lee, Y, Lee, E, Hahn, H, Kim, H, Heo, Y, Jang, D.M, Kim, H.J, Kim, H.S.
登録日2023-08-22
公開日2024-01-24
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Structural insights into N-terminal methionine cleavage by the human mitochondrial methionine aminopeptidase, MetAP1D.
Sci Rep, 13, 2023
8JZJ
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BU of 8jzj by Molmil
E.coli Glyceraldehyde-3-phosphate dehydrogenase structure under cryoprotect condition of ammonium sulfate
分子名称: Glyceraldehyde-3-phosphate dehydrogenase, SULFATE ION
著者Jang, K, Hlaing, S.H.S, Kim, H.G, Kim, N, Choe, H.W, Kim, Y.J.
登録日2023-07-05
公開日2024-02-14
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献E.coli Glyceraldehyde-3-phosphate dehydrogenase structure under cryoprotect condition of ammonium sulfate
To Be Published
4W8C
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BU of 4w8c by Molmil
Crystal structure of the helical domain deleted form MsrA from Clostridium oremlandii
分子名称: GLYCINE, Peptide methionine sulfoxide reductase MsrA
著者Lee, E.H, Hwang, K.Y, Kim, H.-Y.
登録日2014-08-23
公開日2015-07-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7568 Å)
主引用文献Essential role of the C-terminal helical domain in active site formation of selenoprotein MsrA from Clostridium oremlandii
Plos One, 10, 2015
7FER
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BU of 7fer by Molmil
Cryo-EM structure of BsClpP-ADEP1 complex at pH 4.2
分子名称: ADEP1, ATP-dependent Clp protease proteolytic subunit
著者Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K.
登録日2021-07-21
公開日2022-07-06
最終更新日2022-07-20
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022
7FEQ
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BU of 7feq by Molmil
Cryo-EM structure of apo BsClpP at pH 6.5
分子名称: ATP-dependent Clp protease proteolytic subunit
著者Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K.
登録日2021-07-21
公開日2022-07-06
最終更新日2022-07-20
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022
7FEP
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BU of 7fep by Molmil
Cryo-EM structure of BsClpP-ADEP1 complex at pH 6.5
分子名称: ADEP1, ATP-dependent Clp protease proteolytic subunit
著者Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K.
登録日2021-07-21
公開日2022-07-06
最終更新日2022-07-20
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022

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