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PDB: 492 件

4NU2
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Crystal structure of an ice-binding protein (FfIBP) from the Antarctic bacterium, Flavobacterium frigoris PS1
分子名称: Antifreeze protein
著者Do, H, Kim, S.J, Lee, S.G, Park, H, Kim, H.J, Lee, J.H.
登録日2013-12-03
公開日2014-04-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-based characterization and antifreeze properties of a hyperactive ice-binding protein from the Antarctic bacterium Flavobacterium frigoris PS1
Acta Crystallogr.,Sect.D, 70, 2014
3TD5
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Crystal structure of OmpA-like domain from Acinetobacter baumannii in complex with L-Ala-gamma-D-Glu-m-DAP-D-Ala-D-Ala
分子名称: CHLORIDE ION, Outer membrane protein omp38, peptide(L-Ala-gamma-D-Glu-m-DAP-D-Ala-D-Ala)
著者Park, J.S, Lee, W.C, Song, J.H, Kim, H.Y.
登録日2011-08-10
公開日2011-10-26
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Mechanism of anchoring of OmpA protein to the cell wall peptidoglycan of the gram-negative bacterial outer membrane
Faseb J., 26, 2012
3TD4
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Crystal structure of OmpA-like domain from Acinetobacter baumannii in complex with diaminopimelate
分子名称: 2,6-DIAMINOPIMELIC ACID, Outer membrane protein omp38
著者Park, J.S, Lee, W.C, Song, J.H, Kim, H.Y.
登録日2011-08-10
公開日2011-10-26
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Mechanism of anchoring of OmpA protein to the cell wall peptidoglycan of the gram-negative bacterial outer membrane
Faseb J., 26, 2012
3TD3
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Crystal structure of OmpA-like domain from Acinetobacter baumannii in complex with glycine
分子名称: GLYCINE, Outer membrane protein omp38
著者Park, J.S, Lee, W.C, Song, J.H, Kim, H.Y.
登録日2011-08-10
公開日2011-10-26
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Mechanism of anchoring of OmpA protein to the cell wall peptidoglycan of the gram-negative bacterial outer membrane
Faseb J., 26, 2012
6P5W
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Structure of DCN1 bound to 3-methyl-N-((4S,5S)-3-methyl-6-oxo-1-phenyl-4-(p-tolyl)-4,5,6,7-tetrahydro-1H-pyrazolo[3,4-b]pyridin-5-yl)benzamide
分子名称: 3-methyl-N-[(4S,5S)-3-methyl-4-(4-methylphenyl)-6-oxo-1-phenyl-4,5,6,7-tetrahydro-1H-pyrazolo[3,4-b]pyridin-5-yl]benzamide, Lysozyme,DCN1-like protein 1 chimera
著者Guy, R.K, Kim, H.S, Hammill, J.T, Scott, D.C, Schulman, B.A.
登録日2019-05-31
公開日2019-09-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Discovery of Novel Pyrazolo-pyridone DCN1 Inhibitors Controlling Cullin Neddylation.
J.Med.Chem., 62, 2019
3E5N
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Crystal structure of D-alanine-D-alanine ligase from Xanthomonas oryzae pv. oryzae KACC10331
分子名称: D-alanine-D-alanine ligase A
著者Doan, T.N.T, Kim, J.K, Kim, H.S, Ahn, Y.J, Kim, J.G, Lee, B.M, Kang, L.W.
登録日2008-08-14
公開日2009-08-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of D-alanine-D-alanine ligase from Xanthomonas oryzae pv. oryzae KACC10331
To be published
6P5V
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Structure of DCN1 bound to N-((4S,5S)-7-ethyl-4-(4-fluorophenyl)-3-methyl-6-oxo-1-phenyl-4,5,6,7-tetrahydro-1H-pyrazolo[3,4-b]pyridin-5-yl)-3-methylbenzamide
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Lysozyme,DCN1-like protein 1 fusion, N-[(4S,5S)-1-[(1S)-cyclohex-3-en-1-yl]-7-ethyl-4-(4-fluorophenyl)-3-methyl-6-oxo-4,5,6,7-tetrahydro-1H-pyrazolo[3,4-b]pyridin-5-yl]-3-methylbenzamide
著者Guy, R.K, Kim, H.S, Hammill, J.T, Scott, D.C, Schulman, B.A.
登録日2019-05-31
公開日2019-09-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.398 Å)
主引用文献Discovery of Novel Pyrazolo-pyridone DCN1 Inhibitors Controlling Cullin Neddylation.
J.Med.Chem., 62, 2019
4JJT
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The crystal structure of enoyl-CoA hydratase from Mycobacterium tuberculosis H37Rv
分子名称: ACETATE ION, Enoyl-CoA hydratase, GLYCEROL
著者Tan, K, Holowicki, J, Endres, M, Kim, C.-Y, Kim, H, Hung, L.-W, Terwilliger, T.C, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
登録日2013-03-08
公開日2013-03-27
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.496 Å)
主引用文献The crystal structure of enoyl-CoA hydratase from Mycobacterium tuberculosis H37Rv
To be Published
4R27
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Crystal structure of beta-glycosidase BGL167
分子名称: Glycoside hydrolase
著者Park, S.J, Choi, J.M, Kyeong, H.H, Kim, S.G, Kim, H.S.
登録日2014-08-09
公開日2015-05-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Rational design of a beta-glycosidase with high regiospecificity for triterpenoid tailoring
Chembiochem, 16, 2015
2HK1
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Crystal structure of D-psicose 3-epimerase (DPEase) in the presence of D-fructose
分子名称: D-PSICOSE 3-EPIMERASE, D-fructose, MANGANESE (II) ION
著者Kim, K, Kim, H.J, Oh, D.K, Cha, S.S, Rhee, S.
登録日2006-07-03
公開日2006-08-29
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of d-Psicose 3-epimerase from Agrobacterium tumefaciens and its Complex with True Substrate d-Fructose: A Pivotal Role of Metal in Catalysis, an Active Site for the Non-phosphorylated Substrate, and its Conformational Changes
J.Mol.Biol., 361, 2006
2HK0
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Crystal structure of D-psicose 3-epimerase (DPEase) in the absence of substrate
分子名称: D-PSICOSE 3-EPIMERASE
著者Kim, K, Kim, H.J, Oh, D.K, Cha, S.S, Rhee, S.
登録日2006-07-03
公開日2006-08-29
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of d-Psicose 3-epimerase from Agrobacterium tumefaciens and its Complex with True Substrate d-Fructose: A Pivotal Role of Metal in Catalysis, an Active Site for the Non-phosphorylated Substrate, and its Conformational Changes
J.Mol.Biol., 361, 2006
3P28
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Structure of a Circular Permutant of Green Fluorescent Protein
分子名称: Green fluorescent protein
著者Melief, E.H, Kim, H, Kim, T.S, Wachter, R.M, Tonge, P.J.
登録日2010-10-01
公開日2011-10-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Construction and Characterization of a Stable Circular Permutant of Green Fluorescent Protein
To be Published
5XB1
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BU of 5xb1 by Molmil
human ferritin mutant - E-helix deletion
分子名称: Ferritin heavy chain
著者Lee, S.G, Ahn, B.J, Jeong, H, Kim, H, Hyun, J, Jung, Y.
登録日2017-03-15
公開日2018-02-21
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Four-fold Channel-Nicked Human Ferritin Nanocages for Active Drug Loading and pH-Responsive Drug Release
Angew. Chem. Int. Ed. Engl., 57, 2018
3GN4
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BU of 3gn4 by Molmil
Myosin lever arm
分子名称: CALCIUM ION, Calmodulin, MAGNESIUM ION, ...
著者Mukherjea, M, Llinas, P, Kim, H, Travaglia, M, Safer, D, Zong, A.B, Menetrey, J, Franzini-Armstrong, C, Selvin, P.R, Houdusse, A, Sweeney, H.L.
登録日2009-03-16
公開日2009-09-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Myosin VI dimerization triggers an unfolding of a three-helix bundle in order to extend its reach
Mol.Cell, 35, 2009
5YI5
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human ferritin mutant - E-helix deletion
分子名称: Ferritin heavy chain
著者Lee, S.G, Yoon, H.R, Ahn, B.J, Jeong, H, Hyun, J, Jung, Y, Kim, H.
登録日2017-10-02
公開日2018-02-21
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Four-fold Channel-Nicked Human Ferritin Nanocages for Active Drug Loading and pH-Responsive Drug Release
Angew. Chem. Int. Ed. Engl., 57, 2018
7ML3
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General transcription factor TFIIH (weak binding)
分子名称: BJ4_G0050160.mRNA.1.CDS.1, General transcription and DNA repair factor IIH, General transcription and DNA repair factor IIH helicase subunit XPB, ...
著者Yang, C, Fujiwara, R, Kim, H.J, Gorbea Colon, J.J, Steimle, S, Garcia, B.A, Murakami, K.
登録日2021-04-27
公開日2022-02-02
最終更新日2022-02-16
実験手法ELECTRON MICROSCOPY (7.6 Å)
主引用文献Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II.
Mol.Cell, 82, 2022
7F3G
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BU of 7f3g by Molmil
Crystal structure of DCLK1 kinase domain in complex with ruxolitinib
分子名称: (3R)-3-cyclopentyl-3-[4-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)-1H-pyrazol-1-yl]propanenitrile, Isoform 4 of Serine/threonine-protein kinase DCLK1
著者Lim, H.J, Jang, D.M, Kim, H.S.
登録日2021-06-16
公開日2021-08-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Basis of Inhibition of DCLK1 by Ruxolitinib.
Int J Mol Sci, 22, 2021
6OIB
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BU of 6oib by Molmil
Crystal structure of human Sulfide Quinone Oxidoreductase in complex with coenzyme Q
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, HYDROSULFURIC ACID, ...
著者Banerjee, R, Cho, U.S, Kim, H, Moon, S.
登録日2019-04-09
公開日2020-01-15
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献A Catalytic Trisulfide in Human Sulfide Quinone Oxidoreductase Catalyzes Coenzyme A Persulfide Synthesis and Inhibits Butyrate Oxidation.
Cell Chem Biol, 26, 2019
2HJW
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Crystal Structure of the BC domain of ACC2
分子名称: Acetyl-CoA carboxylase 2
著者Cho, Y.S, Lee, J.I, Shin, D, Kim, H.T, Lee, T.G, Heo, Y.S.
登録日2006-07-02
公開日2007-07-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the biotin carboxylase domain of human acetyl-CoA carboxylase 2.
Proteins, 70, 2008
1UAL
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BU of 1ual by Molmil
Crystal structure of tRNA(m1G37)methyltransferase: Insight into tRNA recognition
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, tRNA (Guanine-N(1)-)-methyltransferase
著者Ahn, H.J, Kim, H.-W, Yoon, H.-J, Lee, B.I, Suh, S.W, Yang, J.K.
登録日2003-03-11
公開日2003-06-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of tRNA(m(1)G37)methyltransferase: insights into tRNA recognition
EMBO J., 22, 2003
5XD9
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BU of 5xd9 by Molmil
Crystal structure analysis of 3,6-anhydro-L-galactonate cycloisomerase
分子名称: 3,6-anhydro-alpha-L-galactonate cycloisomerase, MAGNESIUM ION
著者Lee, S, Choi, I.-G, Kim, H.-Y.
登録日2017-03-27
公開日2017-09-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure analysis of 3,6-anhydro-l-galactonate cycloisomerase suggests emergence of novel substrate specificity in the enolase superfamily
Biochem. Biophys. Res. Commun., 491, 2017
1UAJ
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Crystal structure of tRNA(m1G37)methyltransferase: Insight into tRNA recognition
分子名称: tRNA (Guanine-N(1)-)-methyltransferase
著者Ahn, H.J, Kim, H.-W, Yoon, H.-J, Lee, B.I, Suh, S.W, Yang, J.K.
登録日2003-03-11
公開日2003-06-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of tRNA(m(1)G37)methyltransferase: insights into tRNA recognition
EMBO J., 22, 2003
1UAM
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Crystal structure of tRNA(m1G37)methyltransferase: Insight into tRNA recognition
分子名称: PHOSPHATE ION, S-ADENOSYL-L-HOMOCYSTEINE, tRNA (Guanine-N(1)-)-methyltransferase
著者Ahn, H.J, Kim, H.-W, Yoon, H.-J, Lee, B.I, Suh, S.W, Yang, J.K.
登録日2003-03-11
公開日2003-06-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of tRNA(m(1)G37)methyltransferase: insights into tRNA recognition
EMBO J., 22, 2003
5IPW
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oligopeptide-binding protein OppA
分子名称: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein, putative
著者Lee, H.H, Kim, H.J, Yoon, H.J.
登録日2016-03-10
公開日2017-03-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of a putative oligopeptide-binding periplasmic protein from a hyperthermophile
Extremophiles, 20, 2016
1QBY
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THE SOLUTION STRUCTURE OF A BAY-REGION 1R-BENZ[A]ANTHRACENE OXIDE ADDUCT AT THE N6 POSITION OF ADENINE OF AN OLIGODEOXYNUCLEOTIDE CONTAINING THE HUMAN N-RAS CODON 61 SEQUENCE
分子名称: 1R,2S,3R,4S-TETRAHYDRO-BENZO[A]ANTHRACENE-2,3,4-TRIOL, 5'-D(*CP*GP*GP*AP*CP*(BZA)AP*AP*GP*AP*AP*G)-3', 5'-D(*CP*TP*TP*CP*TP*TP*GP*TP*CP*CP* G)-3'
著者Li, Z, Mao, H, Kim, H.-Y, Tamura, P.J, Harris, C.M, Harris, T.M, Stone, M.P.
登録日1999-04-27
公開日1999-05-06
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Intercalation of the (-)-(1R,2S,3R, 4S)-N6-[1-benz[a]anthracenyl]-2'-deoxyadenosyl adduct in an oligodeoxynucleotide containing the human N-ras codon 61 sequence.
Biochemistry, 38, 1999

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