Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 29 results

6NDU
DownloadVisualize
BU of 6ndu by Molmil
Structure of human PACRG-MEIG1 complex
Descriptor: CHLORIDE ION, Meiosis expressed gene 1 protein homolog, PHOSPHATE ION, ...
Authors:Khan, N, Croteau, N, Pelletier, D, Veyron, S, Trempe, J.F.
Deposit date:2018-12-14
Release date:2019-10-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of human PACRG in complex with MEIG1
Biorxiv, 2019
6NEP
DownloadVisualize
BU of 6nep by Molmil
Structure of human PACRG-MEIG1 complex
Descriptor: CHLORIDE ION, Meiosis expressed gene 1 protein homolog, PHOSPHATE ION, ...
Authors:Khan, N, Croteau, N, Pelletier, D, Veyron, S, Trempe, J.F.
Deposit date:2018-12-18
Release date:2019-10-23
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (2.097625 Å)
Cite:Crystal structure of human PACRG in complex with MEIG1
Biorxiv, 2019
7DDB
DownloadVisualize
BU of 7ddb by Molmil
Crystal structure of fungal antifreeze protein with intermediate activity
Descriptor: Antifreeze protein, MAGNESIUM ION
Authors:Khan, N.M.M.U, Arai, T, Tsuda, S, Kondo, H.
Deposit date:2020-10-28
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Characterization of microbial antifreeze protein with intermediate activity suggests that a bound-water network is essential for hyperactivity.
Sci Rep, 11, 2021
7DC5
DownloadVisualize
BU of 7dc5 by Molmil
Crystal structure of fungal antifreeze protein with intermediate activity
Descriptor: Antifreeze protein, SULFATE ION
Authors:Khan, N.M.M.U, Arai, T, Tsuda, S, Kondo, H.
Deposit date:2020-10-23
Release date:2021-10-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Characterization of microbial antifreeze protein with intermediate activity suggests that a bound-water network is essential for hyperactivity.
Sci Rep, 11, 2021
6UCC
DownloadVisualize
BU of 6ucc by Molmil
Structure of human PACRG-MEIG1 complex (limited proteolysis)
Descriptor: DI(HYDROXYETHYL)ETHER, Meiosis expressed gene 1 protein homolog, PHOSPHATE ION, ...
Authors:Khan, N, Croteau, N, Pelletier, D, Veyron, S, Trempe, J.F.
Deposit date:2019-09-16
Release date:2019-10-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of human PACRG in complex with MEIG1
Biorxiv, 2019
5KP0
DownloadVisualize
BU of 5kp0 by Molmil
Recognition and targeting mechanisms by chaperones in flagella assembly and operation
Descriptor: Flagellar protein FliT,Flagellum-specific ATP synthase
Authors:Khanra, N.K, Rossi, P, Economou, A, Kalodimos, C.G.
Deposit date:2016-07-01
Release date:2016-08-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Recognition and targeting mechanisms by chaperones in flagellum assembly and operation.
Proc.Natl.Acad.Sci.USA, 113, 2016
5KS6
DownloadVisualize
BU of 5ks6 by Molmil
Recognition and targeting mechanisms by chaperones in flagella assembly and operation
Descriptor: Flagellar protein FliT
Authors:Khanra, N.K, Rossi, P, Economou, A, Kalodimos, C.G.
Deposit date:2016-07-07
Release date:2016-08-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Recognition and targeting mechanisms by chaperones in flagellum assembly and operation.
Proc.Natl.Acad.Sci.USA, 113, 2016
5KRW
DownloadVisualize
BU of 5krw by Molmil
Recognition and targeting mechanisms by chaperones in flagella assembly and operation
Descriptor: Flagellar protein FliT,Flagellar hook-associated protein 2 fusion
Authors:Khanra, N.K, Rossi, P, Economou, A, Kalodimos, C.G.
Deposit date:2016-07-07
Release date:2016-08-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Recognition and targeting mechanisms by chaperones in flagellum assembly and operation.
Proc.Natl.Acad.Sci.USA, 113, 2016
6DJQ
DownloadVisualize
BU of 6djq by Molmil
Vps1 GTPase-BSE fusion complexed with GDP.AlF4-
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, SODIUM ION, ...
Authors:Varlakhanova, N.V, Brady, T.M, Tornabene, B.A, Hosford, C.J, Chappie, J.S, Ford, M.G.J.
Deposit date:2018-05-25
Release date:2018-08-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of the fungal dynamin-related protein Vps1 reveal a unique, open helical architecture.
J. Cell Biol., 217, 2018
6DI7
DownloadVisualize
BU of 6di7 by Molmil
Vps1 GTPase-BSE fusion complexed with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Putative sorting protein
Authors:Varlakhanova, N.V, Brady, T.M, Ford, M.G.J.
Deposit date:2018-05-22
Release date:2018-08-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of the fungal dynamin-related protein Vps1 reveal a unique, open helical architecture.
J. Cell Biol., 217, 2018
8SG4
DownloadVisualize
BU of 8sg4 by Molmil
E1435Q Ycf1 mutant in dephosphorylated state
Descriptor: Metal resistance protein YCF1
Authors:Khandelwal, N.K, Tomasiak, T.M.
Deposit date:2023-04-11
Release date:2024-03-06
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:E1435Q Ycf1 mutant in dephosphorylated state
To Be Published
7M69
DownloadVisualize
BU of 7m69 by Molmil
E1435Q Ycf1 mutant in inward-facing wide conformation
Descriptor: Metal resistance protein YCF1
Authors:Khandelwal, N.K, Millan, C.R, Thaker, T.M, Tomasiak, T.M.
Deposit date:2021-03-25
Release date:2022-04-06
Last modified:2022-10-19
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:The structural basis for regulation of the glutathione transporter Ycf1 by regulatory domain phosphorylation.
Nat Commun, 13, 2022
7M68
DownloadVisualize
BU of 7m68 by Molmil
E1435Q Ycf1 mutant in inward-facing narrow conformation
Descriptor: Metal resistance protein YCF1
Authors:Khandelwal, N.K, Millan, C.R, Thaker, T.M, Tomasiak, T.M.
Deposit date:2021-03-25
Release date:2022-04-06
Last modified:2022-10-19
Method:ELECTRON MICROSCOPY (4.04 Å)
Cite:The structural basis for regulation of the glutathione transporter Ycf1 by regulatory domain phosphorylation.
Nat Commun, 13, 2022
7KS0
DownloadVisualize
BU of 7ks0 by Molmil
GluK2/K5 with 6-Cyano-7-nitroquinoxaline-2,3-dione (CNQX)
Descriptor: Glutamate receptor ionotropic, kainate 2, kainate 5,Green fluorescent protein chimera
Authors:Khanra, N, Brown, P.M.G.E, Perozzo, A.M, Bowie, D, Meyerson, J.R.
Deposit date:2020-11-20
Release date:2021-03-24
Last modified:2021-07-07
Method:ELECTRON MICROSCOPY (5.3 Å)
Cite:Architecture and structural dynamics of the heteromeric GluK2/K5 kainate receptor.
Elife, 10, 2021
7KS3
DownloadVisualize
BU of 7ks3 by Molmil
GluK2/K5 with L-Glu
Descriptor: Glutamate receptor ionotropic, kainate 2, kainate 5,Green fluorescent protein chimera
Authors:Khanra, N, Brown, P.M.G.E, Perozzo, A.M, Bowie, D, Meyerson, J.R.
Deposit date:2020-11-20
Release date:2021-03-24
Last modified:2021-07-07
Method:ELECTRON MICROSCOPY (5.8 Å)
Cite:Architecture and structural dynamics of the heteromeric GluK2/K5 kainate receptor.
Elife, 10, 2021
1O9K
DownloadVisualize
BU of 1o9k by Molmil
Crystal structure of the retinoblastoma tumour suppressor protein bound to E2F peptide
Descriptor: RETINOBLASTOMA-ASSOCIATED PROTEIN, TRANSCRIPTION FACTOR E2F1
Authors:Xiao, B, Spencer, J, Clements, A, Ali-Khan, N, Mittnacht, S, Broceno, C, Burghammer, M, Perrakis, A, Marmorstein, R, Gamblin, S.J.
Deposit date:2002-12-16
Release date:2003-03-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of the Retinoblastoma Tumor Suppressor Protein Bound to E2F and the Molecular Basis of its Regulation
Proc.Natl.Acad.Sci.USA, 100, 2003
6NUI
DownloadVisualize
BU of 6nui by Molmil
Human Guanylate Kinase
Descriptor: Guanylate kinase
Authors:Sabo, T.M, Khan, N, Ban, D, Trigo-Mourino, P, Carneiro, M.G, Trent, J.O, Konrad, M, Lee, D.
Deposit date:2019-02-01
Release date:2019-06-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure and functional investigation of human guanylate kinase reveals allosteric networking and a crucial role for the enzyme in cancer.
J.Biol.Chem., 294, 2019
6DJA
DownloadVisualize
BU of 6dja by Molmil
ZN-DEPENDENT 5/B/6 METALLO-BETA-LACTAMASE FROM BACILLUS CEREUS
Descriptor: Metallo-beta-lactamase type 2, ZINC ION
Authors:Bui, A.A, Khan, N.H, Shaw, R.W, Sutton, R.B.
Deposit date:2018-05-24
Release date:2019-05-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:A DNA aptamer reveals an allosteric site for inhibition in metallo-beta-lactamases.
Plos One, 14, 2019
2NWB
DownloadVisualize
BU of 2nwb by Molmil
Crystal Structure of a Putative 2,3-dioxygenase (SO4414) from Shewanella oneidensis in complex with ferric heme. Northeast Structural Genomics Target SoR52.
Descriptor: Conserved domain protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Forouhar, F, Anderson, J.L.R, Mowat, C.G, Hussain, A, Seetharaman, J, Bruckmann, C, Thackray, S.J, Khan, N, Cunningham, K, Janjua, H, Zhao, L, Xiao, R, Ma, L.C, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Champman, S.K, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-11-14
Release date:2006-12-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular insights into substrate recognition and catalysis by tryptophan 2,3-dioxygenase.
Proc.Natl.Acad.Sci.Usa, 104, 2007
6DEF
DownloadVisualize
BU of 6def by Molmil
Vps1 GTPase-BSE fusion complexed with GMPPCP
Descriptor: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, Vps1 GTPase-BSE
Authors:Ford, M.G.J, Varlakhanova, N.V, Brady, T.M, Chappie, J.S, Hosford, C.J.
Deposit date:2018-05-11
Release date:2018-08-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structures of the fungal dynamin-related protein Vps1 reveal a unique, open helical architecture.
J. Cell Biol., 217, 2018
6VJF
DownloadVisualize
BU of 6vjf by Molmil
The P-Loop K to A mutation of C. therm Vps1 GTPase-BSE
Descriptor: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, Putative sorting protein Vps1
Authors:Tornabene, B.A, Varlakhanova, N.V, Chappie, J.S, Ford, M.G.J.
Deposit date:2020-01-15
Release date:2020-02-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.472 Å)
Cite:Structural and functional characterization of the dominant negative P-loop lysine mutation in the dynamin superfamily protein Vps1.
Protein Sci., 29, 2020
7TIV
DownloadVisualize
BU of 7tiv by Molmil
Crystal structure of SARS-CoV-2 3CL in complex with inhibitor EB48
Descriptor: (1S,2S)-2-[(N-{[(3-chlorophenyl)methoxy]carbonyl}-3-cyclohexyl-L-alanyl)amino]-1-hydroxy-3-[(3R)-2-oxo-2,3-dihydro-1H-pyrrol-3-yl]propane-1-sulfonic acid, 3C-like proteinase nsp5, MAGNESIUM ION
Authors:Forouhar, F, Liu, H, Iketani, S, Zack, A, Khanizeman, N, Bednarova, E, Fowler, B, Hong, S.J, Mohri, H, Nair, M.S, Huang, Y, Tay, N.E.S, Lee, S, Karan, C, Resnick, S.J, Quinn, C, Li, W, Shion, H, Jurtschenko, C, Lauber, M.A, McDonald, T, Stokes, M.E, Hurst, B, Rovis, T, Chavez, A, Ho, D.D, Stockwell, B.R.
Deposit date:2022-01-14
Release date:2022-05-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Development of optimized drug-like small molecule inhibitors of the SARS-CoV-2 3CL protease for treatment of COVID-19.
Nat Commun, 13, 2022
7TIY
DownloadVisualize
BU of 7tiy by Molmil
Crystal structure of SARS-CoV-2 3CL in complex with inhibitor NK01-48
Descriptor: (1S,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-2-[(N-{[(2,4,5-trifluorophenyl)methoxy]carbonyl}-L-leucyl)amino]propane-1-sulfonic acid, 1,2-ETHANEDIOL, 3C-like proteinase nsp5, ...
Authors:Forouhar, F, Liu, H, Iketani, S, Zack, A, Khanizeman, N, Bednarova, E, Fowler, B, Hong, S.J, Mohri, H, Nair, M.S, Huang, Y, Tay, N.E.S, Lee, S, Karan, C, Resnick, S.J, Quinn, C, Li, W, Shion, H, Jurtschenko, C, Lauber, M.A, McDonald, T, Stokes, M.E, Hurst, B, Rovis, T, Chavez, A, Ho, D.D, Stockwell, B.R.
Deposit date:2022-01-14
Release date:2022-05-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Development of optimized drug-like small molecule inhibitors of the SARS-CoV-2 3CL protease for treatment of COVID-19.
Nat Commun, 13, 2022
7TIU
DownloadVisualize
BU of 7tiu by Molmil
Crystal structure of SARS-CoV-2 3CL in complex with inhibitor EB46
Descriptor: (1S,2S)-2-[(N-{[(3-chlorophenyl)methoxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase nsp5, MAGNESIUM ION, ...
Authors:Forouhar, F, Liu, H, Iketani, S, Zack, A, Khanizeman, N, Bednarova, E, Fowler, B, Hong, S.J, Mohri, H, Nair, M.S, Huang, Y, Tay, N.E.S, Lee, S, Karan, C, Resnick, S.J, Quinn, C, Li, W, Shion, H, Jurtschenko, C, Lauber, M.A, McDonald, T, Stokes, M.E, Hurst, B, Rovis, T, Chavez, A, Ho, D.D, Stockwell, B.R.
Deposit date:2022-01-14
Release date:2022-05-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Development of optimized drug-like small molecule inhibitors of the SARS-CoV-2 3CL protease for treatment of COVID-19.
Nat Commun, 13, 2022
7TIZ
DownloadVisualize
BU of 7tiz by Molmil
Crystal structure of SARS-CoV-2 3CL in complex with inhibitor NK01-63
Descriptor: (1S,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-2-{[N-({[3-(trifluoromethyl)phenyl]methoxy}carbonyl)-L-leucyl]amino}propane-1-sulfonic acid, 1,2-ETHANEDIOL, 3C-like proteinase nsp5, ...
Authors:Forouhar, F, Liu, H, Iketani, S, Zack, A, Khanizeman, N, Bednarova, E, Fowler, B, Hong, S.J, Mohri, H, Nair, M.S, Huang, Y, Tay, N.E.S, Lee, S, Karan, C, Resnick, S.J, Quinn, C, Li, W, Shion, H, Jurtschenko, C, Lauber, M.A, McDonald, T, Stokes, M.E, Hurst, B, Rovis, T, Chavez, A, Ho, D.D, Stockwell, B.R.
Deposit date:2022-01-14
Release date:2022-05-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Development of optimized drug-like small molecule inhibitors of the SARS-CoV-2 3CL protease for treatment of COVID-19.
Nat Commun, 13, 2022

 

12>

222926

건을2024-07-24부터공개중

PDB statisticsPDBj update infoContact PDBjnumon