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PDB: 51 results

8DCC
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BU of 8dcc by Molmil
SARS-CoV-2 Receptor-Binding Domain SPEEDesign Immunogen 3 Bound to P2B-2F6 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, P2B-2F6 Fab heavy chain, P2B-2F6 Fab light chain, ...
Authors:Dickey, T.D, Tolia, N.H.
Deposit date:2022-06-16
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Design of the SARS-CoV-2 RBD vaccine antigen improves neutralizing antibody response.
Sci Adv, 8, 2022
2Z48
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BU of 2z48 by Molmil
Crystal Structure of Hemolytic Lectin CEL-III Complexed with GalNac
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, ...
Authors:Hatakeyama, T, Unno, H, Eto, S, Hidemura, H, Uchida, T, Kouzuma, Y.
Deposit date:2007-06-13
Release date:2007-10-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:C-type lectin-like carbohydrate-recognition of the hemolytic lectin CEL-III containing ricin-type beta-trefoil folds
J.Biol.Chem., 282, 2007
2Z49
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BU of 2z49 by Molmil
Crystal Structure of Hemolytic Lectin CEL-III Complexed with methyl-alpha-D-galactopylanoside
Descriptor: CALCIUM ION, Hemolytic lectin CEL-III, MAGNESIUM ION, ...
Authors:Hatakeyama, T, Unno, H, Eto, S, Hidemura, H, Uchida, T, Kouzuma, Y.
Deposit date:2007-06-13
Release date:2007-10-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:C-type lectin-like carbohydrate-recognition of the hemolytic lectin CEL-III containing ricin-type beta-trefoil folds
J.Biol.Chem., 282, 2007
3ALU
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BU of 3alu by Molmil
Crystal structure of CEL-IV complexed with Raffinose
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Lectin CEL-IV, ...
Authors:Hatakeyama, T, Hozawa, T, Ishii, K, Kamiya, T, Goda, S, Kusunoki, M, Unno, H.
Deposit date:2010-08-07
Release date:2011-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Galactose recognition by a tetrameric C-type lectin, CEL-IV, containing the EPN carbohydrate recognition motif
J.Biol.Chem., 286, 2011
3ALT
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BU of 3alt by Molmil
Crystal structure of CEL-IV complexed with Melibiose
Descriptor: CALCIUM ION, Lectin CEL-IV, C-type, ...
Authors:Hatakeyama, T, Hozawa, T, Ishii, K, Kamiya, T, Goda, S, Kusunoki, M, Unno, H.
Deposit date:2010-08-07
Release date:2011-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Galactose recognition by a tetrameric C-type lectin, CEL-IV, containing the EPN carbohydrate recognition motif
J.Biol.Chem., 286, 2011
3ALS
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BU of 3als by Molmil
Crystal structure of CEL-IV
Descriptor: CALCIUM ION, Lectin CEL-IV, C-type
Authors:Hatakeyama, T, Hozawa, T, Ishii, K, Kamiya, T, Goda, S, Kusunoki, M, Unno, H.
Deposit date:2010-08-07
Release date:2011-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Galactose recognition by a tetrameric C-type lectin, CEL-IV, containing the EPN carbohydrate recognition motif
J.Biol.Chem., 286, 2011
2N9L
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BU of 2n9l by Molmil
1H, 13C, and 15N Chemical Shift Assignments for in-cell GB1
Descriptor: Immunoglobulin G-binding protein G
Authors:Ikeya, T, Hanashima, T, Hosoya, S, Shimazaki, M, Ikeda, S, Mishima, M, Guentert, P, Ito, Y.
Deposit date:2015-11-30
Release date:2016-12-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Improved in-cell structure determination of proteins at near-physiological concentration
Sci Rep, 6, 2016
2N9K
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BU of 2n9k by Molmil
1H, 13C, and 15N Chemical Shift Assignments for in vitro GB1
Descriptor: Immunoglobulin G-binding protein G
Authors:Ikeya, T, Hanashima, T, Hosoya, S, Shimazaki, M, Ikeda, S, Mishima, M, Guentert, P, Ito, Y.
Deposit date:2015-11-26
Release date:2016-12-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Improved in-cell structure determination of proteins at near-physiological concentration
Sci Rep, 6, 2016
7NAZ
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BU of 7naz by Molmil
TPR-rich domain of EccA3 from M. smegmatis
Descriptor: 1,4-DIETHYLENE DIOXIDE, ESX-3 secretion system protein EccA3, GLYCEROL, ...
Authors:Crosskey, T.D, Wilmanns, M.
Deposit date:2021-01-25
Release date:2022-03-02
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of TPR-rich domain of M. smegmatis EccA3
To Be Published
4HID
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BU of 4hid by Molmil
Crystal Structure of Schizosaccharomyces pombe Pot1pC bound to ssDNA (GCTTACGGT)
Descriptor: DNA (5'-D(*GP*CP*TP*TP*AP*CP*GP*GP*T)-3'), Protection of telomeres protein 1
Authors:Dickey, T.H, Wuttke, D.S.
Deposit date:2012-10-11
Release date:2012-12-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.822 Å)
Cite:Nonspecific Recognition Is Achieved in Pot1pC through the Use of Multiple Binding Modes.
Structure, 21, 2013
4HJ8
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BU of 4hj8 by Molmil
Crystal Structure of Schizosaccharomyces pombe Pot1pC bound to ssDNA (GGTTACGCT)
Descriptor: DNA (5'-D(*GP*GP*TP*TP*AP*CP*GP*CP*T)-3'), Protection of telomeres protein 1
Authors:Dickey, T.H, Wuttke, D.S.
Deposit date:2012-10-12
Release date:2012-12-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.043 Å)
Cite:Nonspecific Recognition Is Achieved in Pot1pC through the Use of Multiple Binding Modes.
Structure, 21, 2013
4HJA
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BU of 4hja by Molmil
Crystal Structure of Schizosaccharomyces pombe Pot1pC bound to ssDNA (ACGGTTACGGT)
Descriptor: DNA (5'-D(*AP*CP*GP*GP*TP*TP*AP*CP*GP*GP*T)-3'), Protection of telomeres protein 1
Authors:Dickey, T.H, Wuttke, D.S.
Deposit date:2012-10-12
Release date:2012-12-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Nonspecific Recognition Is Achieved in Pot1pC through the Use of Multiple Binding Modes.
Structure, 21, 2013
4HJ7
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BU of 4hj7 by Molmil
Crystal Structure of Schizosaccharomyces pombe Pot1pC bound to ssDNA (GGTTAGGGT)
Descriptor: DNA (5'-D(*GP*GP*TP*TP*AP*GP*GP*GP*T)-3'), Protection of telomeres protein 1
Authors:Dickey, T.H, Wuttke, D.S.
Deposit date:2012-10-12
Release date:2012-12-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.783 Å)
Cite:Nonspecific Recognition Is Achieved in Pot1pC through the Use of Multiple Binding Modes.
Structure, 21, 2013
4HJ5
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BU of 4hj5 by Molmil
Crystal Structure of Schizosaccharomyces pombe Pot1pC bound to ssDNA (GGTTTCGGT)
Descriptor: DNA (5'-D(*GP*GP*TP*TP*TP*CP*GP*GP*T)-3'), Protection of telomeres protein 1
Authors:Dickey, T.H, Wuttke, D.S.
Deposit date:2012-10-12
Release date:2012-12-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Nonspecific Recognition Is Achieved in Pot1pC through the Use of Multiple Binding Modes.
Structure, 21, 2013
4HIM
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BU of 4him by Molmil
Crystal Structure of Schizosaccharomyces pombe Pot1pC bound to ssDNA (GGATACGGT)
Descriptor: DNA (5'-D(*GP*GP*AP*TP*AP*CP*GP*GP*T)-3'), Protection of telomeres protein 1
Authors:Dickey, T.H, Wuttke, D.S.
Deposit date:2012-10-11
Release date:2012-12-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Nonspecific Recognition Is Achieved in Pot1pC through the Use of Multiple Binding Modes.
Structure, 21, 2013
4HIK
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BU of 4hik by Molmil
Crystal Structure of Schizosaccharomyces pombe Pot1pC bound to ssDNA (GGTTACGGT)
Descriptor: DNA (5'-D(*GP*GP*TP*TP*AP*CP*GP*GP*T)-3'), Protection of telomeres protein 1
Authors:Dickey, T.H, Wuttke, D.S.
Deposit date:2012-10-11
Release date:2012-12-12
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.636 Å)
Cite:Nonspecific Recognition Is Achieved in Pot1pC through the Use of Multiple Binding Modes.
Structure, 21, 2013
4HIO
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BU of 4hio by Molmil
Crystal Structure of Schizosaccharomyces pombe Pot1pC bound to ssDNA (GGTAACGGT)
Descriptor: DNA (5'-D(*GP*GP*TP*AP*AP*CP*GP*GP*T)-3'), Protection of telomeres protein 1
Authors:Dickey, T.H, McKercher, M.A, Wuttke, D.S.
Deposit date:2012-10-11
Release date:2012-12-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.753 Å)
Cite:Nonspecific Recognition Is Achieved in Pot1pC through the Use of Multiple Binding Modes.
Structure, 21, 2013
4HJ9
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BU of 4hj9 by Molmil
Crystal Structure of Schizosaccharomyces pombe Pot1pC bound to ssDNA (CGGTTACGGT)
Descriptor: DNA (5'-D(*CP*GP*GP*TP*TP*AP*CP*GP*GP*T)-3'), Protection of telomeres protein 1
Authors:Dickey, T.H, Wuttke, D.S.
Deposit date:2012-10-12
Release date:2012-12-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Nonspecific Recognition Is Achieved in Pot1pC through the Use of Multiple Binding Modes.
Structure, 21, 2013
3JZ4
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BU of 3jz4 by Molmil
Crystal structure of E. coli NADP dependent enzyme
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Succinate-semialdehyde dehydrogenase [NADP+]
Authors:Langendorf, C.G, Key, T.L.G, Fenalti, G, Kan, W.T, Buckle, A.M, Caradoc-Davies, T, Tuck, K.L, Law, R.H.P, Whisstock, J.C.
Deposit date:2009-09-22
Release date:2010-03-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The X-ray crystal structure of Escherichia coli succinic semialdehyde dehydrogenase; structural insights into NADP+/enzyme interactions.
Plos One, 5, 2010
3VP6
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BU of 3vp6 by Molmil
Structural characterization of Glutamic Acid Decarboxylase; insights into the mechanism of autoinactivation
Descriptor: 4-oxo-4H-pyran-2,6-dicarboxylic acid, GLYCEROL, Glutamate decarboxylase 1
Authors:Langendorf, C.G, Tuck, K.L, Key, T.L.G, Rosado, C.J, Wong, A.S.M, Fenalti, G, Buckle, A.M, Law, R.H.P, Whisstock, J.C.
Deposit date:2012-02-27
Release date:2013-01-16
Last modified:2013-08-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural characterization of the mechanism through which human glutamic acid decarboxylase auto-activates
Biosci.Rep., 33, 2013
2LX0
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BU of 2lx0 by Molmil
Arced helix (ArcH) NMR structure of the reovirus p14 fusion-associated small transmembrane (FAST) protein transmembrane domain (TMD) in dodecyl phosphocholine (DPC) micelles
Descriptor: Membrane fusion protein p14
Authors:Sarker, M, Key, T, Duncan, R, Rainey, J.K.
Deposit date:2012-08-10
Release date:2012-09-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A Cell-Cell Membrane Fusion Module Comprising a Transmembrane Arced Helix (ArcH)
To be Published
7EN4
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BU of 7en4 by Molmil
Multi-state structure determination and dynamics analysis elucidate a new ubiquitin-recognition mechanism of yeast ubiquitin C-terminal hydrolase.
Descriptor: Ubiquitin carboxyl-terminal hydrolase YUH1
Authors:Okada, M, Tateishi, Y, Nojiri, E, Mikawa, T, Rajesh, S, Ogasawa, H, Ueda, T, Yagi, H, Kohno, T, Kigawa, T, Shimada, I, Guentert, P, Yutaka, I, Ikeya, T.
Deposit date:2021-04-15
Release date:2022-04-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Multi-state structure determination and dynamics analysis elucidate a new ubiquitin-recognition mechanism of yeast ubiquitin C-terminal hydrolase.
To Be Published
8AU4
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BU of 8au4 by Molmil
Structural insights reveal a heterotetramer between oncogenic K-Ras4BG12V and Rgl2, a RalA/B activator
Descriptor: Ral guanine nucleotide dissociation stimulator-like 2
Authors:Tariq, M, Ikeya, T, Togashi, N, Fairall, L, Alejo, C.B, Kamei, S, Alonso, B.R, Campillo, M.A.M, Hudson, A, Ito, Y, Schwabe, J, Dominguez, C, Tanaka, K.
Deposit date:2022-08-25
Release date:2023-08-23
Last modified:2023-10-25
Method:SOLUTION NMR
Cite:Structural insights into the complex of oncogenic KRas4B G12V and Rgl2, a RalA/B activator.
Life Sci Alliance, 7, 2024
6K4I
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BU of 6k4i by Molmil
The partially disordered conformation of ubiquitin (Q41N variant)
Descriptor: ubiquitin
Authors:Wakamoto, T, Ikeya, T, Kitazawa, S, Baxter, N.J, Williamson, M.P, Kitahara, R.
Deposit date:2019-05-24
Release date:2019-10-30
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Paramagnetic relaxation enhancement-assisted structural characterization of a partially disordered conformation of ubiquitin.
Protein Sci., 28, 2019
7Y4N
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BU of 7y4n by Molmil
Insight into the C-terminal SH3 domain mediated binding of Drosophila Drk to Sos and Dos
Descriptor: Growth factor receptor-bound protein 2
Authors:Pooppadi, M.S, Ikeya, T, Sugasawa, H, Watanabe, R, Mishima, M, Inomata, K, Ito, Y.
Deposit date:2022-06-15
Release date:2022-08-31
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Insight into the C-terminal SH3 domain mediated binding of Drosophila Drk to Sos and Dos.
Biochem.Biophys.Res.Commun., 625, 2022

 

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