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PDB: 651 件

4JLD
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Crystal Structures of adenylate kinase with 2 ADP's
分子名称: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
著者Cho, Y.-J, Kern, D.
登録日2013-03-12
公開日2014-06-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.552 Å)
主引用文献The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4DQ1
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BU of 4dq1 by Molmil
Thymidylate synthase from Staphylococcus aureus.
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Thymidylate synthase
著者Osipiuk, J, Holowicki, J, Jedrzejczak, R, Rubin, E, Guinn, K, Ioerger, T, Baker, D, Sacchettini, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
登録日2012-02-14
公開日2012-03-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Thymidylate synthase from Staphylococcus aureus.
To be Published
4DCL
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BU of 4dcl by Molmil
Computationally Designed Self-assembling tetrahedron protein, T308, Crystallized in space group F23
分子名称: Putative acetyltransferase SACOL2570
著者Sawaya, M.R, King, N.P, Sheffler, W, Baker, D, Yeates, T.O.
登録日2012-01-17
公開日2012-06-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Computational design of self-assembling protein nanomaterials with atomic level accuracy.
Science, 336, 2012
2MJZ
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BU of 2mjz by Molmil
Capsid model of M13 bacteriophage virus from Magic-angle spinning NMR and Rosetta modeling
分子名称: Capsid protein G8P
著者Morag, O, Sgourakis, N.G, Baker, D, Goldbourt, A.
登録日2014-01-22
公開日2015-01-07
最終更新日2024-05-01
実験手法SOLID-STATE NMR
主引用文献The NMR-Rosetta capsid model of M13 bacteriophage reveals a quadrupled hydrophobic packing epitope.
Proc.Natl.Acad.Sci.USA, 112, 2015
2MDW
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BU of 2mdw by Molmil
NMR structure of a strand-swapped dimer of the WW domain
分子名称: Designed protein
著者Kier, B.L, Sheffler, W, Baker, D.
登録日2013-09-18
公開日2014-10-01
実験手法SOLUTION NMR
主引用文献Covalent Assembly of Homooligomeric Proteins Using Structure-templating Hubs
To be Published
4FB7
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BU of 4fb7 by Molmil
The apo form of idole-3-glycerol phosphate synthase (TrpC) form Mycobacterium tuberculosis
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Indole-3-glycerol phosphate synthase
著者Michalska, K, Chhor, G, Jedrzejczak, R, Terwilliger, T.C, Rubin, E.J, Guinn, K, Baker, D, Ioerger, T.R, Sacchettini, J.C, Joachimiak, A, Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI), Midwest Center for Structural Genomics (MCSG)
登録日2012-05-22
公開日2012-06-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献The apo form of idole-3-glycerol phosphate synthase (TrpC) form Mycobacterium tuberculosis
To be Published
4FFD
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BU of 4ffd by Molmil
Crystal structure of engineered protein. northeast structural genomics consortium target or48
分子名称: MAGNESIUM ION, PF00702 DOMAIN PROTEIN
著者Seetharaman, J, Lew, S, Nivon, L, Baker, D, Bjelic, S, Ciccosanti, C, Sahdev, S, Xiao, R, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2012-05-31
公開日2013-02-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Crystal structure of engineered protein. northeast structural genomics consortium target or48
To be Published
2MDV
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BU of 2mdv by Molmil
NMR structure of beta alpha alpha 38
分子名称: Designed protein
著者Kier, B.L, Sheffler, W, Baker, D.
登録日2013-09-18
公開日2014-10-01
実験手法SOLUTION NMR
主引用文献Covalent Assembly of Homooligomeric Proteins Using Structure-templating Hubs
To be Published
8RH1
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BU of 8rh1 by Molmil
Trimeric HSV-2F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.
分子名称: Envelope glycoprotein B, HDIT101 Fab heavy chain, HDIT101 Fab light chain
著者Kalbermatter, D, Seyfizadeh, N, Imhof, T, Ries, M, Mueller, C, Jenner, L, Blumenschein, E, Yendrzheyevskiy, A, Moog, K, Eckert, D, Engel, R, Diebolder, P, Chami, M, Krauss, J, Schaller, T, Arndt, M.
登録日2023-12-14
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Development of a highly effective combination monoclonal antibody therapy against Herpes simplex virus.
J.Biomed.Sci., 31, 2024
8RH2
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BU of 8rh2 by Molmil
Trimeric HSV-2G gB ectodomain in postfusion conformation with three bound HDIT102 Fab molecules.
分子名称: Envelope glycoprotein B, HDIT102 Fab heavy chain, HDIT102 Fab light chain
著者Kalbermatter, D, Seyfizadeh, N, Imhof, T, Ries, M, Mueller, C, Jenner, L, Blumenschein, E, Yendrzheyevskiy, A, Moog, K, Eckert, D, Engel, R, Diebolder, P, Chami, M, Krauss, J, Schaller, T, Arndt, M.
登録日2023-12-14
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Development of a highly effective combination monoclonal antibody therapy against Herpes simplex virus.
J.Biomed.Sci., 31, 2024
2MBM
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BU of 2mbm by Molmil
Solution NMR Structure of De novo designed Top7 Fold Protein Top7m13, Northeast Structural Genomics Consortium (NESG) Target OR33
分子名称: Top7 Fold Protein Top7m13
著者Liu, G, Zanghellini, A.L, Chan, K, Xiao, R, Janjua, H, Kogan, S, Maglaqui, M, Ciccosanti, C, Acton, T.B, Kornhaber, G, Everett, J.K, Baker, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2013-08-02
公開日2013-11-13
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Solution NMR Structure of De novo designed Top7 Fold Protein Top7m13, Northeast Structural Genomics Consortium (NESG) Target OR33
To be Published
4JLO
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BU of 4jlo by Molmil
Crystal structure of Aquifex adenylate kinase R150K mutant
分子名称: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
著者Cho, Y.-J, Phung, L, Kern, D.
登録日2013-03-12
公開日2014-06-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JKY
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BU of 4jky by Molmil
Cobalt between two ADP's in the active site of adenylate kinase
分子名称: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase, COBALT (II) ION
著者Cho, Y.-J, Kern, D.
登録日2013-03-12
公開日2014-06-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.373 Å)
主引用文献The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JLB
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BU of 4jlb by Molmil
Crystal Structures of Adenylate kinase with 2ADP's
分子名称: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
著者Cho, Y.-J, Kern, D.
登録日2013-03-12
公開日2014-06-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.528 Å)
主引用文献The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4HB7
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BU of 4hb7 by Molmil
The Structure of Dihydropteroate Synthase from Staphylococcus aureus subsp. aureus Mu50.
分子名称: 1,2-ETHANEDIOL, Dihydropteroate synthase
著者Cuff, M.E, Holowicki, J, Jedrzejczak, R, Terwilliger, T.C, Rubin, E.J, Guinn, K, Baker, D, Ioerger, T.R, Sacchettini, J.C, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
登録日2012-09-27
公開日2012-10-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The Structure of Dihydropteroate Synthase from Staphylococcus aureus subsp. aureus Mu50.
TO BE PUBLISHED
4JL6
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BU of 4jl6 by Molmil
Crystal Structure of Adenylate kinase with 2 ADP's
分子名称: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
著者Cho, Y.-J, Kern, D.
登録日2013-03-12
公開日2014-06-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JL5
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BU of 4jl5 by Molmil
A high resolution structure of Aquifex Adenylate kinase with 2 ADP's
分子名称: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
著者Cho, Y.-J, Kern, D.
登録日2013-03-12
公開日2014-06-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
8UGY
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BU of 8ugy by Molmil
Serotonin 1E receptor (5-HT1eR)-Gi1 Complex bound with Mianserin
分子名称: 5-hydroxytryptamine receptor 1E, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Zilberg, G, Warren, A.L, Wacker, D.
登録日2023-10-06
公開日2024-05-01
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.31 Å)
主引用文献Structural insights into the unexpected agonism of tetracyclic antidepressants at serotonin receptors 5-HT 1e R and 5-HT 1F R.
Sci Adv, 10, 2024
5K0K
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BU of 5k0k by Molmil
Crystal structure of the catalytic domain of the proto-oncogene tyrosine-protein kinase MER in complex with inhibitor UNC2434
分子名称: 15-{4-[(4-methylpiperazin-1-yl)methyl]phenyl}-4,5,6,7,9,10,11,12-octahydro-2,16-(azenometheno)pyrrolo[2,1-d][1,3,5,9]te traazacyclotetradecin-8(3H)-one, CHLORIDE ION, MAGNESIUM ION, ...
著者Wang, X, Liu, J, Zhang, W, Stashko, M.A, Nichols, J, DeRyckere, D, Miley, M.J, Norris-Drouin, J, Chen, Z, Machius, M, Wood, E, Graham, D.K, Earp, H.S, Graham, K, Kireev, D, Frye, S.V.
登録日2016-05-17
公開日2017-01-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.545 Å)
主引用文献Design and Synthesis of Novel Macrocyclic Mer Tyrosine Kinase Inhibitors.
ACS Med Chem Lett, 7, 2016
5K0X
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BU of 5k0x by Molmil
Crystal structure of the catalytic domain of the proto-oncogene tyrosine-protein kinase MER in complex with inhibitor UNC2541
分子名称: (7S)-7-amino-N-[(4-fluorophenyl)methyl]-8-oxo-2,9,16,18,21-pentaazabicyclo[15.3.1]henicosa-1(21),17,19-triene-20-carboxamide, CHLORIDE ION, Tyrosine-protein kinase Mer
著者McIver, A.L, Zhang, W, Liu, Q, Jiang, X, Stashko, M.A, Nichols, J, Miley, M.J, Norris-Drouin, J, Machius, M, DeRyckere, D, Wood, E, Graham, D.K, Earp, H.S, Kireev, D, Frye, S.V, Wang, X.
登録日2016-05-17
公開日2017-02-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.231 Å)
主引用文献Discovery of Macrocyclic Pyrimidines as MerTK-Specific Inhibitors.
ChemMedChem, 12, 2017
4JLP
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BU of 4jlp by Molmil
Crystal structure of R150K aquifex adenylate kinase mutant
分子名称: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
著者Cho, Y.-J, Phung, L, Kern, D.
登録日2013-03-12
公開日2014-06-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.433 Å)
主引用文献The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JZK
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BU of 4jzk by Molmil
Crystal Structure of Adenylate kinase of E. Coli with ADP/AMP bound
分子名称: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
著者Cho, Y.-J, Agafonov, R, Kern, D.
登録日2013-04-03
公開日2014-04-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Crystal structure of E. Coli Adenylate kinase with ADP and AMP bound
To be Published
4M2Q
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BU of 4m2q by Molmil
Crystal structure of non-myristoylated recoverin with Cysteine-39 oxidized to sulfenic acid
分子名称: CALCIUM ION, Recoverin
著者Prem Kumar, R, Chakrabarti, K, Kern, D, Oprian, D.D.
登録日2013-08-05
公開日2013-11-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A Highly Conserved Cysteine of Neuronal Calcium-sensing Proteins Controls Cooperative Binding of Ca2+ to Recoverin.
J.Biol.Chem., 288, 2013
2M89
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BU of 2m89 by Molmil
Solution structure of the Aha1 dimer from Colwellia psychrerythraea
分子名称: Aha1 domain protein
著者Rossi, P, Sgourakis, N.G, Shi, L, Liu, G, Barbieri, C.M, Lee, H, Grant, T.D, Luft, J.R, Xiao, R, Acton, T.B, Montelione, G.T, Snell, E.H, Baker, D, Lange, O.A, Northeast Structural Genomics Consortium (NESG)
登録日2013-05-09
公開日2013-09-04
最終更新日2024-05-01
実験手法SOLUTION NMR, SOLUTION SCATTERING
主引用文献A hybrid NMR/SAXS-based approach for discriminating oligomeric protein interfaces using Rosetta.
Proteins, 83, 2015
2MV0
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BU of 2mv0 by Molmil
Solution NMR Structure of Maltose-binding protein from Escherichia coli, Northeast Structural Genomics Consortium (NESG) Target ER690
分子名称: Maltose-binding periplasmic protein
著者Rossi, P, Lange, O.F, Sgourakis, N.G, Song, Y, Lee, H, Aramini, J.M, Ertekin, A, Xiao, R, Acton, T.B, Baker, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2014-09-18
公開日2014-12-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Determination of solution structures of proteins up to 40 kDa using CS-Rosetta with sparse NMR data from deuterated samples.
Proc.Natl.Acad.Sci.USA, 109, 2012

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