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PDB: 77 件

8D97
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Apo gRAMP
分子名称: RAMP superfamily protein, RNA (42-MER), ZINC ION
著者Hu, C, Nam, K.H, Schuler, G, Ke, A.
登録日2022-06-09
公開日2023-06-14
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Craspase is a CRISPR RNA-guided, RNA-activated protease.
Science, 377, 2022
8CTL
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BU of 8ctl by Molmil
IscB and wRNA bound to Target DNA (locked state)
分子名称: DNA non-target strand, DNA target strand, IscB, ...
著者Schuler, G.A, Hu, C, Ke, A.
登録日2022-05-16
公開日2022-06-15
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis for RNA-guided DNA cleavage by IscB-omega RNA and mechanistic comparison with Cas9.
Science, 376, 2022
8D9H
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BU of 8d9h by Molmil
gRAMP-TPR-CHAT match PFS target RNA(Craspase)
分子名称: CHAT domain protein, PHOSPHATE ION, RAMP superfamily protein, ...
著者Hu, C, Nam, K.H, Schuler, G, Ke, A.
登録日2022-06-09
公開日2023-06-14
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Craspase is a CRISPR RNA-guided, RNA-activated protease.
Science, 377, 2022
8D9E
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BU of 8d9e by Molmil
gRAMP-match PFS target
分子名称: RAMP superfamily protein, RNA (36-MER), RNA (5'-R(P*UP*CP*CP*GP*GP*GP*GP*CP*AP*GP*AP*AP*AP*AP*UP*UP*GP*GP*GP*UP*A)-3'), ...
著者Hu, C, Nam, K.H, Schuler, G, Ke, A.
登録日2022-06-09
公開日2023-06-14
実験手法ELECTRON MICROSCOPY (3.76 Å)
主引用文献Craspase is a CRISPR RNA-guided, RNA-activated protease.
Science, 377, 2022
8D9F
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BU of 8d9f by Molmil
gRAMP-TPR-CHAT (Craspase)
分子名称: CHAT domain protein, RAMP superfamily protein, RNA (33-MER), ...
著者Hu, C, Nam, K.H, Schuler, G, Ke, A.
登録日2022-06-09
公開日2023-06-14
実験手法ELECTRON MICROSCOPY (2.71 Å)
主引用文献Craspase is a CRISPR RNA-guided, RNA-activated protease.
Science, 377, 2022
8D9I
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BU of 8d9i by Molmil
gRAMP non-matching PFS-with Mg
分子名称: RAMP superfamily protein, RNA (35-MER), RNA (5'-R(P*UP*CP*CP*GP*GP*GP*GP*CP*AP*GP*AP*AP*AP*AP*UP*UP*GP*GP*A)-3'), ...
著者Hu, C, Nam, K.H, Schuler, G, Ke, A.
登録日2022-06-09
公開日2023-06-14
実験手法ELECTRON MICROSCOPY (3.62 Å)
主引用文献Craspase is a CRISPR RNA-guided, RNA-activated protease.
Science, 377, 2022
8D9G
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BU of 8d9g by Molmil
gRAMP-TPR-CHAT Non match PFS target RNA(Craspase)
分子名称: CHAT domain protein, RAMP superfamily protein, RNA (36-MER), ...
著者Hu, C, Nam, K.H, Schuler, G, Ke, A.
登録日2022-06-09
公開日2023-06-14
実験手法ELECTRON MICROSCOPY (2.57 Å)
主引用文献Craspase is a CRISPR RNA-guided, RNA-activated protease.
Science, 377, 2022
8D8N
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BU of 8d8n by Molmil
gRAMP non-match PFS target RNA
分子名称: RAMP superfamily protein, RNA (35-MER), RNA (5'-R(P*UP*CP*CP*GP*GP*GP*GP*CP*AP*GP*AP*AP*AP*AP*UP*UP*GP*GP*AP*CP*A)-3'), ...
著者Hu, C, Nam, K.H, Schuler, G, Ke, A.
登録日2022-06-08
公開日2022-08-31
最終更新日2022-09-28
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Craspase is a CRISPR RNA-guided, RNA-activated protease.
Science, 377, 2022
8CSZ
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BU of 8csz by Molmil
IscB and wRNA bound to Target DNA
分子名称: DNA non-target strand, DNA target strand, IscB, ...
著者Schuler, G.A, Hu, C, Ke, A.
登録日2022-05-13
公開日2022-06-15
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis for RNA-guided DNA cleavage by IscB-omega RNA and mechanistic comparison with Cas9.
Science, 376, 2022
4Y1I
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BU of 4y1i by Molmil
Lactococcus lactis yybP-ykoY Mn riboswitch bound to Mn2+
分子名称: BARIUM ION, GUANOSINE-5'-TRIPHOSPHATE, Lactococcus lactis yybP-ykoY riboswitch, ...
著者Price, I.R, Ke, A.
登録日2015-02-07
公開日2015-04-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Mn(2+)-Sensing Mechanisms of yybP-ykoY Orphan Riboswitches.
Mol.Cell, 57, 2015
4Y1J
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Lactococcus lactis yybP-ykoY Mn riboswitch A41U binding site mutant in presence of Mn2+
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, STRONTIUM ION, ...
著者Price, I.R, Ke, A.
登録日2015-02-07
公開日2015-04-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Mn(2+)-Sensing Mechanisms of yybP-ykoY Orphan Riboswitches.
Mol.Cell, 57, 2015
6C27
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BU of 6c27 by Molmil
SAM-III riboswitch ON-state
分子名称: COBALT HEXAMMINE(III), SAM-III riboswitch
著者Grigg, J.C, Price, I.R, Ke, A.
登録日2018-01-07
公開日2019-01-09
最終更新日2022-03-23
実験手法X-RAY DIFFRACTION (3.601 Å)
主引用文献Evidence for two-tiered conformation selection in the SAM-III riboswitch
To Be Published
2XXA
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BU of 2xxa by Molmil
The Crystal Structure of the Signal Recognition Particle (SRP) in Complex with its Receptor(SR)
分子名称: 4.5S RNA, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ...
著者Ataide, S.F, Schmitz, N, Shen, K, Ke, A, Shan, S, Doudna, J.A, Ban, N.
登録日2010-11-09
公開日2011-03-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.94 Å)
主引用文献The Crystal Structure of the Signal Recognition Particle in Complex with its Receptor.
Science, 331, 2011
4Y1M
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BU of 4y1m by Molmil
An Escherichia coli yybP-ykoY Mn riboswitch in the Mn2+-free state
分子名称: E. coli yybP-ykoY riboswitch, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Price, I.R, Ke, A.
登録日2015-02-08
公開日2015-04-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Mn(2+)-Sensing Mechanisms of yybP-ykoY Orphan Riboswitches.
Mol.Cell, 57, 2015
6UFG
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BU of 6ufg by Molmil
Co-crystal structure of M. tuberculosis ileS T-box in complex with tRNA-3'-OH
分子名称: MAGNESIUM ION, POTASSIUM ION, RNA (166-MER), ...
著者Battaglia, R.A, Grigg, J.C, Ke, A.
登録日2019-09-24
公開日2019-11-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.929 Å)
主引用文献Structural basis for tRNA decoding and aminoacylation sensing by T-box riboregulators.
Nat.Struct.Mol.Biol., 26, 2019
6UFH
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BU of 6ufh by Molmil
Co-crystal structure of M. tuberculosis ileS T-box in complex with tRNA-3'-2'3'cyclic phosphate
分子名称: MAGNESIUM ION, RNA (167-MER), RNA (77-MER)
著者Battaglia, R.A, Grigg, J.A, Ke, A.
登録日2019-09-24
公開日2019-11-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.104 Å)
主引用文献Structural basis for tRNA decoding and aminoacylation sensing by T-box riboregulators.
Nat.Struct.Mol.Biol., 26, 2019
3R4F
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BU of 3r4f by Molmil
Prohead RNA
分子名称: MAGNESIUM ION, pRNA
著者Ding, F, Lu, C, Zhano, W, Rajashankar, K.R, Anderson, D.L, Jardine, P.J, Grimes, S, Ke, A.
登録日2011-03-17
公開日2011-04-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure and assembly of the essential RNA ring component of a viral DNA packaging motor.
Proc.Natl.Acad.Sci.USA, 108, 2011
7TRA
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BU of 7tra by Molmil
Cascade complex from type I-A CRISPR-Cas system
分子名称: CRISPR-associated endonuclease Cas3-HD, CRISPR-associated helicase Cas3, Cas11a, ...
著者Hu, C, Ni, D, Nam, K.H, Majumdar, S, McLean, J, Stahlberg, H, Terns, M, Ke, A.
登録日2022-01-28
公開日2022-08-10
最終更新日2022-08-17
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Allosteric control of type I-A CRISPR-Cas3 complexes and establishment as effective nucleic acid detection and human genome editing tools.
Mol.Cell, 82, 2022
7TR9
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BU of 7tr9 by Molmil
Cascade complex from type I-A CRISPR-Cas system
分子名称: CRISPR-associated endonuclease Cas3-HD, CRISPR-associated helicase Cas3, Cas11a, ...
著者Hu, C, Ni, D, Nam, K.H, Majumdar, S, McLean, J, Stahlberg, H, Terns, M, Ke, A.
登録日2022-01-28
公開日2022-08-10
最終更新日2022-08-24
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Allosteric control of type I-A CRISPR-Cas3 complexes and establishment as effective nucleic acid detection and human genome editing tools.
Mol.Cell, 82, 2022
7TR8
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BU of 7tr8 by Molmil
Cascade complex from type I-A CRISPR-Cas system
分子名称: CRISPR-associated endonuclease Cas3-HD, CRISPR-associated helicase Cas3, Cas11a, ...
著者Hu, C, Ni, D, Nam, K.H, Majumdar, S, McLean, J, Stahlberg, H, Terns, M, Ke, A.
登録日2022-01-28
公開日2022-08-10
最終更新日2022-08-17
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Allosteric control of type I-A CRISPR-Cas3 complexes and establishment as effective nucleic acid detection and human genome editing tools.
Mol.Cell, 82, 2022
7TR6
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BU of 7tr6 by Molmil
Cascade complex from type I-A CRISPR-Cas system
分子名称: Cas11a, Cas5a, Cas7a, ...
著者Hu, C, Ni, D, Nam, K.H, Majumdar, S, McLean, J, Stahlberg, H, Terns, M, Ke, A.
登録日2022-01-28
公開日2022-08-10
最終更新日2022-08-17
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Allosteric control of type I-A CRISPR-Cas3 complexes and establishment as effective nucleic acid detection and human genome editing tools.
Mol.Cell, 82, 2022
7R2K
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BU of 7r2k by Molmil
elongated Cascade complex from type I-A CRISPR-Cas system
分子名称: CRISPR-associated endonuclease Cas3-HD, CRISPR-associated helicase Cas3, Cas11a, ...
著者Hu, C, Ni, D, Nam, K.H, Terns, M, Stahlberg, H, Ke, A.
登録日2022-02-04
公開日2023-08-16
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural snapshots for an atypic type I CRISPR-Cas system
To Be Published
7R21
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BU of 7r21 by Molmil
elongated Cascade complex from type I-A CRISPR-Cas system
分子名称: Cas11a, Cas7a, CrRNA (62-MER), ...
著者Hu, C, Ni, D, Nam, K.H, Stahlberg, H, Terns, M, Ke, A.
登録日2022-02-04
公開日2023-08-16
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural snapshots for an atypic type I CRISPR-Cas system
To Be Published
7MI5
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BU of 7mi5 by Molmil
Asymmetrical PAM-Non PAM prespacer bound Cas4/Cas1/Cas2 complex
分子名称: CRISPR-associated endoribonuclease Cas2, CRISPR-associated exonuclease Cas4/endonuclease Cas1 fusion, DNA (26-MER), ...
著者Hu, C.Y, Ke, A.K.
登録日2021-04-16
公開日2021-11-17
実験手法ELECTRON MICROSCOPY (3.57 Å)
主引用文献Mechanism for Cas4-assisted directional spacer acquisition in CRISPR-Cas.
Nature, 598, 2021
7MI4
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BU of 7mi4 by Molmil
Symmetrical PAM-PAM prespacer bound Cas4/Cas1/Cas2 complex
分子名称: CRISPR-associated endoribonuclease Cas2, CRISPR-associated exonuclease Cas4/endonuclease Cas1 fusion, DNA (35-MER), ...
著者Hu, C.Y, Ke, A.K.
登録日2021-04-16
公開日2021-11-17
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Mechanism for Cas4-assisted directional spacer acquisition in CRISPR-Cas.
Nature, 598, 2021

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件を2024-05-15に公開中

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