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PDB: 72 件

5XVC
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[NiFe]-hydrogenase (Hyb-type) from Citrobacter sp. S-77 in a ferricyanide-oxidized condition
分子名称: DI(HYDROXYETHYL)ETHER, FE3-S4 CLUSTER, FE4-S4-O CLUSTER, ...
著者Nishikawa, K, Matsuura, H, Muhd Noor, N.D, Tai, H, Hirota, S, Kim, J, Kang, J, Tateno, M, Yoon, K.S, Ogo, S, Shomura, Y, Higuchi, Y.
登録日2017-06-27
公開日2018-06-27
最終更新日2019-07-10
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Redox-dependent conformational changes of a proximal [4Fe-4S] cluster in Hyb-type [NiFe]-hydrogenase to protect the active site from O2.
Chem.Commun.(Camb.), 54, 2018
5XVD
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[NiFe]-hydrogenase (Hyb-type) from Citrobacter sp. S-77 in an air-oxidized condition
分子名称: FE3-S4 CLUSTER, FE4-S4-O CLUSTER, GLYCEROL, ...
著者Nishikawa, K, Matsuura, H, Muhd Noor, N.D, Tai, H, Hirota, S, Kim, J, Kang, J, Tateno, M, Yoon, K.S, Ogo, S, Shomura, Y, Higuchi, Y.
登録日2017-06-27
公開日2018-06-27
最終更新日2019-07-10
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Redox-dependent conformational changes of a proximal [4Fe-4S] cluster in Hyb-type [NiFe]-hydrogenase to protect the active site from O2.
Chem.Commun.(Camb.), 54, 2018
5XVB
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[NiFe]-hydrogenase (Hyb-type) from Citrobacter sp. S-77 in an H2-reduced condition
分子名称: FE3-S4 CLUSTER, GLYCEROL, IRON/SULFUR CLUSTER, ...
著者Nishikawa, K, Matsuura, H, Muhd Noor, N.D, Tai, H, Hirota, S, Kim, J, Kang, J, Tateno, M, Yoon, K.S, Ogo, S, Shomura, Y, Higuchi, Y.
登録日2017-06-27
公開日2018-06-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Redox-dependent conformational changes of a proximal [4Fe-4S] cluster in Hyb-type [NiFe]-hydrogenase to protect the active site from O2.
Chem.Commun.(Camb.), 54, 2018
8GOB
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BU of 8gob by Molmil
Crystal Structure of Glycerol Dehydrogenase in the presence of NAD+
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Glycerol dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Park, T, Hoang, H.N, Kang, J.Y, Park, J, Mun, S.A, Jin, M, Yang, J, Jung, C.-H, Eom, S.H.
登録日2022-08-24
公開日2023-06-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural and functional insights into the flexible beta-hairpin of glycerol dehydrogenase.
Febs J., 290, 2023
8GOA
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Crystal Structure of Glycerol Dehydrogenase in the absence of NAD+
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Glycerol dehydrogenase, ZINC ION
著者Park, T, Hoang, H.N, Kang, J.Y, Park, J, Mun, S.A, Jin, M, Yang, J, Jung, C.-H, Eom, S.H.
登録日2022-08-24
公開日2023-06-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural and functional insights into the flexible beta-hairpin of glycerol dehydrogenase.
Febs J., 290, 2023
7XUG
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cryo-EM structure of HK022 putRNA-less E.coli RNA polymerase elongation complex
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Hwang, S, Kang, J.Y.
登録日2022-05-18
公開日2022-08-10
最終更新日2022-08-31
実験手法ELECTRON MICROSCOPY (3.57 Å)
主引用文献Structural basis of transcriptional regulation by a nascent RNA element, HK022 putRNA.
Nat Commun, 13, 2022
7XUE
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Cryo-EM structure of HK022 putRNA-associated E.coli RNA polymerase elongation complex
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Hwang, S.H, Kang, J.Y.
登録日2022-05-18
公開日2022-08-10
最終更新日2022-08-31
実験手法ELECTRON MICROSCOPY (3.17 Å)
主引用文献Structural basis of transcriptional regulation by a nascent RNA element, HK022 putRNA.
Nat Commun, 13, 2022
7XUI
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Cryo-EM structure of sigma70 bound HK022 putRNA-associated E.coli RNA polymerase elongation complex
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Hwang, S, Kang, J.Y.
登録日2022-05-18
公開日2022-08-10
最終更新日2022-08-31
実験手法ELECTRON MICROSCOPY (3.61 Å)
主引用文献Structural basis of transcriptional regulation by a nascent RNA element, HK022 putRNA.
Nat Commun, 13, 2022
5EPP
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BU of 5epp by Molmil
Structural Insights into the Interaction of p97 N-terminus Domain and VBM Motif in Rhomboid Protease, RHBDL4
分子名称: Rhomboid-related protein 4, Transitional endoplasmic reticulum ATPase
著者Lim, J.J, Lee, Y, Ly, T.T, Kang, J.Y, Lee, J.-G, An, J.Y, Youn, H.-S, Park, K.R, Kim, T.G, Yang, J.K, Jun, Y, Eom, S.H.
登録日2015-11-12
公開日2016-09-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Structural insights into the interaction of p97 N-terminus domain and VBM in rhomboid protease, RHBDL4.
Biochem.J., 473, 2016
6J10
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BU of 6j10 by Molmil
Ciclopirox inhibits Hepatitis B Virus secretion by blocking capsid assembly
分子名称: 6-cyclohexyl-4-methyl-1-oxidanyl-pyridin-2-one, Capsid protein
著者Park, S, Jin, M.S, Cho, Y, Kang, J, Kim, S, Park, M, Park, H, Kim, J, Park, S, Hwang, J, Kim, Y, Kim, Y.J.
登録日2018-12-27
公開日2019-04-17
最終更新日2019-05-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Ciclopirox inhibits Hepatitis B Virus secretion by blocking capsid assembly.
Nat Commun, 10, 2019
2P1B
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BU of 2p1b by Molmil
Crystal structure of human nucleophosmin-core
分子名称: Nucleophosmin
著者Lee, H.H, Kim, H.S, Kang, J.Y, Lee, B.I, Ha, J.Y, Yoon, H.J, Lim, S.O, Jung, G, Suh, S.W.
登録日2007-03-03
公開日2007-03-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Crystal structure of human nucleophosmin-core reveals plasticity of the pentamer-pentamer interface
Proteins, 69, 2007
7DNZ
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BU of 7dnz by Molmil
Cryo-EM structure of the human ABCB6 (Hemin and GSH-bound)
分子名称: ATP-binding cassette sub-family B member 6, mitochondrial, CHOLESTEROL HEMISUCCINATE, ...
著者Kim, S, Lee, S.S, Park, J.G, Kim, J.W, Kim, S, Kim, N.J, Hong, S, Kang, J.Y, Jin, M.S.
登録日2020-12-11
公開日2022-06-22
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural Insights into Porphyrin Recognition by the Human ATP-Binding Cassette Transporter ABCB6.
Mol.Cells, 45, 2022
7DNY
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BU of 7dny by Molmil
Cryo-EM structure of the human ABCB6 (coproporphyrin III-bound)
分子名称: ATP-binding cassette sub-family B member 6, mitochondrial, CHOLESTEROL HEMISUCCINATE, ...
著者Kim, S, Lee, S.S, Park, J.G, Kim, J.W, Kim, S, Kim, N.J, Hong, S, Kang, J.Y, Jin, M.S.
登録日2020-12-11
公開日2022-06-22
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural Insights into Porphyrin Recognition by the Human ATP-Binding Cassette Transporter ABCB6.
Mol.Cells, 45, 2022
7YGV
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BU of 7ygv by Molmil
Crystal structure of the Ca2+-bound EFhd1/Swiprosin-2
分子名称: CALCIUM ION, EF-hand domain-containing protein D1, GLYCEROL, ...
著者Mun, S.A, Park, J, Kang, J.Y, Park, T, Jin, M, Ynag, J, Eom, S.H.
登録日2022-07-12
公開日2023-03-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural and biochemical insights into Zn 2+ -bound EF-hand proteins, EFhd1 and EFhd2.
Iucrj, 10, 2023
7YGW
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BU of 7ygw by Molmil
Crystal structure of the Zn2+-bound EFhd1/Swiprosin-2
分子名称: EF-hand domain-containing protein D1, GLYCEROL, ZINC ION
著者Mun, S.A, Park, J, Kang, J.Y, Park, T, Jin, M, Yang, J, Eom, S.H.
登録日2022-07-12
公開日2023-03-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structural and biochemical insights into Zn 2+ -bound EF-hand proteins, EFhd1 and EFhd2.
Iucrj, 10, 2023
7YGY
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BU of 7ygy by Molmil
Crystal structure of the Zn2+-bound EFhd2/Swiprosin-1
分子名称: EF-hand domain-containing protein D2, ZINC ION
著者Mun, S.A, Park, J, Kang, J.Y, Park, T, Jin, M, Yang, J, Eom, S.H.
登録日2022-07-12
公開日2023-03-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural and biochemical insights into Zn 2+ -bound EF-hand proteins, EFhd1 and EFhd2.
Iucrj, 10, 2023
7CLT
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BU of 7clt by Molmil
Crystal structure of the EFhd1/Swiprosin-2, a mitochondrial actin-binding protein
分子名称: CALCIUM ION, EF-hand domain-containing protein D1, GLYCEROL, ...
著者Mun, S.A, Park, J, Park, K.R, Lee, Y, Kang, J.Y, Park, T, Jin, M, Yang, J, Jun, C.D, Eom, S.H.
登録日2020-07-22
公開日2021-01-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.07380986 Å)
主引用文献Structural and Biochemical Characterization of EFhd1/Swiprosin-2, an Actin-Binding Protein in Mitochondria.
Front Cell Dev Biol, 8, 2020
5CJ9
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BU of 5cj9 by Molmil
Bacillus halodurans Arginine repressor, ArgR
分子名称: Arginine repressor, S-1,2-PROPANEDIOL
著者Park, Y.W, Kang, J, Yeo, H.Y, Lee, J.Y.
登録日2015-07-14
公開日2016-06-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.409 Å)
主引用文献Structural Analysis and Insights into the Oligomeric State of an Arginine-Dependent Transcriptional Regulator from Bacillus halodurans.
Plos One, 11, 2016
6IF1
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BU of 6if1 by Molmil
Crystal structure of Ube2K and K48-linked di-ubiquitin complex
分子名称: Ubiquitin, Ubiquitin-conjugating enzyme E2 K
著者Lee, J.-G, Youn, H.-S, Lee, Y, An, J.Y, Park, K.R, Kang, J.Y, Lim, J.J, Eom, S.H.
登録日2018-09-18
公開日2018-11-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.466 Å)
主引用文献Crystal structure of the Ube2K/E2-25K and K48-linked di-ubiquitin complex provides structural insight into the mechanism of K48-specific ubiquitin chain synthesis.
Biochem. Biophys. Res. Commun., 506, 2018
6JG0
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BU of 6jg0 by Molmil
Crystal structure of the N-terminal domain single mutant (S92E) of the human mitochondrial calcium uniporter fused with T4 lysozyme
分子名称: Endolysin,Calcium uniporter protein, SULFATE ION
著者Lee, Y, Park, J, Min, C.K, Kang, J.Y, Kim, T.G, Yamamoto, T, Kim, D.H, Eom, S.H.
登録日2019-02-13
公開日2020-02-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of calcium channel domain
To Be Published
6JB7
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Crystal structure of Ub-conjugated Ube2K C92K&K97A mutant (isopeptide linkage), 2.1 A resolution
分子名称: Ubiquitin, Ubiquitin-conjugating enzyme E2 K
著者Lee, J.-G, Youn, H.-S, Lee, Y, An, J.Y, Park, K.R, Kang, J.Y, Mun, S.A, Park, J, Park, T, Jin, M.W, Yang, J, Eom, S.H.
登録日2019-01-25
公開日2019-03-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of Ub-conjugated Ube2K C92K&K97A mutant (isopeptide linkage), 2.1 A resolution
To Be Published
6JB6
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Crystal structure of Ub-conjugated Ube2K C92K&K97A mutant (isopeptide linkage), 2.7 A resolution
分子名称: Ubiquitin, Ubiquitin-conjugating enzyme E2 K
著者Lee, J.-G, Youn, H.-S, Lee, Y, An, J.Y, Park, K.R, Kang, J.Y, Mun, S.A, Park, J, Park, T, Jin, M.W, Yang, J, Eom, S.H.
登録日2019-01-25
公開日2019-03-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of Ub-conjugated Ube2K C92K&K97A mutant (isopeptide linkage), 2.7 A resolution
To Be Published
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