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PDB: 62 results

5IEL
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BU of 5iel by Molmil
Structure of Lysozyme labeled with fluorescein isothiocyanate (FITC) at 1.15 Angstroms resolution
Descriptor: 2-(6-hydroxy-3-oxo-3H-xanthen-9-yl)-5-[(E)-(sulfanylmethylidene)amino]benzoic acid, Lysozyme C
Authors:Kachalova, G.S, Vlaskina, A.V, Popov, A.P, Simanovskaia, A.A, Krukova, M.V, Lipkin, A.V.
Deposit date:2016-02-25
Release date:2017-03-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structure of Lysozyme labeled with fluorescein isothiocyanate (FITC) at 1.15 Angstroms resolution
To Be Published
5N9O
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BU of 5n9o by Molmil
EGFP(enhanced green fluorescent protein) mutant - L232H
Descriptor: 3,6,9,12,15-PENTAOXAHEPTADECAN-1-OL, Green fluorescent protein
Authors:Kachalova, G.S, Popov, A.P, Simanovskaya, A.A, Krukova, M.V, Lipkin, A.V.
Deposit date:2017-02-26
Release date:2018-03-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structure of EGFP(enhanced green fluorescent protein) mutant - L232H at 0.153 nm
To Be Published
5LIQ
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BU of 5liq by Molmil
The structure of C160S,C508S,C578S mutant of Nt.BspD6I nicking endonuclease at 0.185 nm resolution .
Descriptor: GLYCEROL, Nicking endonuclease N.BspD6I, PHOSPHATE ION
Authors:Kachalova, G.S, Artyukh, R.I, Perevyazova, T.A, Yunusova, A.K, Popov, A.N, Bartunik, H.D, Zheleznaya, L.A.
Deposit date:2016-07-15
Release date:2017-08-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural features of Cysteine residues mutation of the nicking endonuclease Nt.BspD6I.
To Be Published
5LHC
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BU of 5lhc by Molmil
The structure of D456A mutant of Nt.BspD6I nicking endonuclease at 0.24 nm resolution .
Descriptor: GLYCEROL, Nicking endonuclease N.BspD6I, PHOSPHATE ION
Authors:Kachalova, G.S, Yunusova, A.K, Popov, A.N, Artyukh, R.I, Perevyazova, T.A, Bartunik, H.D, Zheleznaya, L.A.
Deposit date:2016-07-10
Release date:2017-08-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural implication of activity loss by D456A mutant of the nicking endonuclease Nt.BspD6I.
To Be Published
2EWF
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BU of 2ewf by Molmil
Crystal structure of the site-specific DNA nickase N.BspD6I
Descriptor: BROMIDE ION, Nicking endonuclease N.BspD6I
Authors:Kachalova, G.S, Bartunik, H.D, Artyukh, R.I, Rogulin, E.A, Perevyazova, T.A, Zheleznaya, L.A, Matvienko, N.I.
Deposit date:2005-11-03
Release date:2006-11-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural analysis of the heterodimeric type IIS restriction endonuclease R.BspD6I acting as a complex between a monomeric site-specific nickase and a catalytic subunit.
J.Mol.Biol., 384, 2008
2O15
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BU of 2o15 by Molmil
Mycobacterium tuberculosis epsp synthase after partial products withdrawal
Descriptor: 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE, PHOSPHATE ION, SULFATE ION
Authors:Kachalova, G.S, Bartunik, H.D, Mycobacterium Tuberculosis Structural Proteomics Project (XMTB)
Deposit date:2006-11-28
Release date:2008-04-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Complexes of 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE
To be Published
2O0X
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BU of 2o0x by Molmil
Mycobacterium tuberculosis epsp synthase in complex with intermediate
Descriptor: 3-phosphoshikimate 1-carboxyvinyltransferase, 5-(1-CARBOXY-1-PHOSPHONOOXY-ETHOXYL)-4-HYDROXY-3-PHOSPHONOOXY-CYCLOHEX-1-ENECARBOXYLIC ACID, SULFATE ION
Authors:Kachalova, G.S, Bartunik, H.D, Mycobacterium Tuberculosis Structural Proteomics Project (XMTB)
Deposit date:2006-11-28
Release date:2008-04-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Complexes of 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE
To be Published
3CFF
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BU of 3cff by Molmil
Photoswitchable red fluorescent protein psRFP, on-state
Descriptor: GFP-like photoswitchable fluorescent protein
Authors:Kachalova, G.S, Gundel, S, Bartunik, H.D, Wiedenmann, J.
Deposit date:2008-03-03
Release date:2009-03-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of Anemonia sulcata red fluorescent protein asRFP
To be Published
3CFH
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BU of 3cfh by Molmil
Photoswitchable red fluorescent protein psRFP, off-state
Descriptor: GFP-like photoswitchable fluorescent protein
Authors:Kachalova, G.S, Gundel, S, Bartunik, H.D, Wiedenmann, J.
Deposit date:2008-03-03
Release date:2009-03-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of red fluorescent protein asRFP
To be Published
3CFA
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BU of 3cfa by Molmil
Anemonia sulcata red fluorescent protein asRFP
Descriptor: GFP-like fluorescent protein
Authors:Kachalova, G.S, Gundel, S, Wiedenmann, J, Bartunik, H.D.
Deposit date:2008-03-03
Release date:2009-03-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of Anemonia sulcata red fluorescent protein asRFP
To be Published
3NG7
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BU of 3ng7 by Molmil
Complex of dithionite-reduced 6-hydroxy-L-nicotine oxidase with substrate bound at active site and inhibitor at exit cavity
Descriptor: (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, 5-[(2R)-1-methylpyrrolidin-2-yl]pyridin-2-ol, 5-[(2S)-1-methylpyrrolidin-2-yl]pyridin-2-ol, ...
Authors:Kachalova, G.S, Bartunik, H.D.
Deposit date:2010-06-11
Release date:2011-03-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystallographic snapshots of the complete reaction cycle of nicotine degradation by an amine oxidase of the monoamine oxidase (MAO) family
Proc.Natl.Acad.Sci.USA, 108, 2011
4DP1
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BU of 4dp1 by Molmil
The 1.35 Angstrom crystal structure of reduced (CuI) poplar plastocyanin B at pH 4.0
Descriptor: ACETATE ION, COPPER (I) ION, GLYCEROL, ...
Authors:Kachalova, G.S, Shosheva, A.H, Bourenkov, G.P, Donchev, A.A, Dimitrov, M.I, Bartunik, H.D.
Deposit date:2012-02-13
Release date:2013-02-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural comparison of the poplar plastocyanin isoforms PCa and PCb sheds new light on the role of the copper site geometry in interactions with redox partners in oxygenic photosynthesis.
J.Inorg.Biochem., 115, 2012
4DP7
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BU of 4dp7 by Molmil
The 1.08 Angstrom crystal structure of oxidized (CuII) poplar plastocyanin A at pH 4.0
Descriptor: COPPER (II) ION, Plastocyanin A, chloroplastic, ...
Authors:Kachalova, G.S, Shosheva, A.H, Bourenkov, G.P, Donchev, A.A, Dimitrov, M.I, Bartunik, H.D.
Deposit date:2012-02-13
Release date:2013-02-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Structural comparison of the poplar plastocyanin isoforms PCa and PCb sheds new light on the role of the copper site geometry in interactions with redox partners in oxygenic photosynthesis.
J.Inorg.Biochem., 115, 2012
4DP4
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BU of 4dp4 by Molmil
The 1.54 Angstrom crystal structure of reduced (CuI) poplar plastocyanin B at pH 6.0
Descriptor: COPPER (I) ION, GLYCEROL, Plastocyanin B, ...
Authors:Kachalova, G.S, Shosheva, A.H, Bourenkov, G.P, Donchev, A.A, Dimitrov, M.I, Bartunik, H.D.
Deposit date:2012-02-13
Release date:2013-02-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structural comparison of the poplar plastocyanin isoforms PCa and PCb sheds new light on the role of the copper site geometry in interactions with redox partners in oxygenic photosynthesis.
J.Inorg.Biochem., 115, 2012
5LIZ
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BU of 5liz by Molmil
The structure of Nt.BspD6I nicking endonuclease with all cysteines mutated by serine residues at 0.19 nm resolution .
Descriptor: Nicking endonuclease N.BspD6I, PHOSPHATE ION
Authors:Kachalova, G.S, Artyukh, R.I, Perevyazova, T.A, Yunusova, A.K, Popov, A.N, Bartunik, H.D, Zheleznaya, L.A.
Deposit date:2016-07-16
Release date:2017-08-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural features of Cysteine residues mutation of the nicking endonuclease Nt.BspD6I.
To Be Published
3NN0
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BU of 3nn0 by Molmil
Complex of 6-hydroxy-L-nicotine oxidase with nicotinamide
Descriptor: (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, 6-hydroxy-L-nicotine oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Kachalova, G.S, Bartunik, H.D.
Deposit date:2010-06-23
Release date:2011-06-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure analysis of free and substrate-bound 6-hydroxy-L-nicotine oxidase from Arthrobacter nicotinovorans.
J.Mol.Biol., 396, 2010
3NK2
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BU of 3nk2 by Molmil
Complex of 6-hydroxy-L-nicotine oxidase with dopamine
Descriptor: (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, 6-hydroxy-L-nicotine oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Kachalova, G.S, Bartunik, H.D.
Deposit date:2010-06-18
Release date:2011-03-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure analysis of free and substrate-bound 6-hydroxy-L-nicotine oxidase from Arthrobacter nicotinovorans.
J.Mol.Biol., 396, 2010
2P14
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BU of 2p14 by Molmil
Crystal structure of small subunit (R.BspD6I2) of the heterodimeric restriction endonuclease R.BspD6I
Descriptor: GLYCEROL, Heterodimeric restriction endonuclease R.BspD6I small subunit, SULFATE ION
Authors:Kachalova, G.S, Bartunik, H.D, Artyukh, R.I, Rogulin, E.A, Yunusova, A.K, Zheleznaya, L.A, Matvienko, N.I.
Deposit date:2007-03-02
Release date:2008-03-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural analysis of the heterodimeric type IIS restriction endonuclease R.BspD6I acting as a complex between a monomeric site-specific nickase and a catalytic subunit.
J.Mol.Biol., 384, 2008
3NN6
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BU of 3nn6 by Molmil
Crystal structure of inhibitor-bound in active centre 6-hydroxy-L-nicotine oxidase from Arthrobacter nicotinovorans
Descriptor: (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, (2R,3S,4S)-5-({[(acetylcarbamoyl)amino]methyl}[(3S,4R)-6-amino-3,4-dimethylhexyl]amino)-2,3,4-trihydroxypentyl [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate (non-preferred name), 5-[(2R)-1-methylpyrrolidin-2-yl]pyridin-2-ol, ...
Authors:Kachalova, G.S, Bartunik, H.D.
Deposit date:2010-06-23
Release date:2011-03-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Crystal structure analysis of free and substrate-bound 6-hydroxy-L-nicotine oxidase from Arthrobacter nicotinovorans.
J.Mol.Biol., 396, 2010
3NK1
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BU of 3nk1 by Molmil
Complex of 6-hydroxy-L-nicotine oxidase with serotonin
Descriptor: (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, 6-hydroxy-L-nicotine oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Kachalova, G.S, Bartunik, H.D.
Deposit date:2010-06-18
Release date:2011-03-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure analysis of free and substrate-bound 6-hydroxy-L-nicotine oxidase from Arthrobacter nicotinovorans.
J.Mol.Biol., 396, 2010
1BZR
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BU of 1bzr by Molmil
ATOMIC RESOLUTION CRYSTAL STRUCTURE ANALYSIS OF NATIVE DEOXY AND CO MYOGLOBIN FROM SPERM WHALE AT ROOM TEMPERATURE
Descriptor: CARBON MONOXIDE, PROTEIN (MYOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Kachalova, G.S, Popov, A.N, Bartunik, H.D.
Deposit date:1998-11-03
Release date:1999-05-10
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:A steric mechanism for inhibition of CO binding to heme proteins.
Science, 284, 1999
3NGC
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BU of 3ngc by Molmil
Complex of 6-hydroxy-L-nicotine oxidase with intermediate methylmyosmine product formed during catalytic turnover
Descriptor: (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, 5-(1-methyl-4,5-dihydro-1H-pyrrol-2-yl)pyridin-2-ol, 5-[(2S)-1-methylpyrrolidin-2-yl]pyridin-2-ol, ...
Authors:Kachalova, G.S, Bartunik, H.D.
Deposit date:2010-06-11
Release date:2011-03-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure analysis of free and substrate-bound 6-hydroxy-L-nicotine oxidase from Arthrobacter nicotinovorans.
J.Mol.Biol., 396, 2010
3NH3
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BU of 3nh3 by Molmil
Complex of 6-hydroxy-L-nicotine oxidase with final ketone product formed during catalytic turnover
Descriptor: (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, 1-(6-hydroxypyridin-3-yl)-4-(methylamino)butan-1-one, 5-[(2S)-1-methylpyrrolidin-2-yl]pyridin-2-ol, ...
Authors:Kachalova, G.S, Bartunik, H.D.
Deposit date:2010-06-14
Release date:2011-03-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure analysis of free and substrate-bound 6-hydroxy-L-nicotine oxidase from Arthrobacter nicotinovorans.
J.Mol.Biol., 396, 2010
3NHO
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BU of 3nho by Molmil
Complex of 6-hydroxy-L-nicotine oxidase with product bound at active site
Descriptor: (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, 1-(6-hydroxypyridin-3-yl)-4-(methylamino)butan-1-one, 6-hydroxy-L-nicotine oxidase, ...
Authors:Kachalova, G.S, Bartunik, H.D.
Deposit date:2010-06-14
Release date:2011-03-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure analysis of free and substrate-bound 6-hydroxy-L-nicotine oxidase from Arthrobacter nicotinovorans.
J.Mol.Biol., 396, 2010
3NK0
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BU of 3nk0 by Molmil
Complex of 6-hydroxy-L-nicotine oxidase with inhibitor bound at active site and turnover product at exit cavity
Descriptor: (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, 1-(6-hydroxypyridin-3-yl)-4-(methylamino)butan-1-one, 5-[(2R)-1-methylpyrrolidin-2-yl]pyridin-2-ol, ...
Authors:Kachalova, G.S, Bartunik, H.D.
Deposit date:2010-06-18
Release date:2011-03-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure analysis of free and substrate-bound 6-hydroxy-L-nicotine oxidase from Arthrobacter nicotinovorans.
J.Mol.Biol., 396, 2010

 

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