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PDB: 1086 results

3G8E
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BU of 3g8e by Molmil
Crystal Structure of Rattus norvegicus Visfatin/PBEF/Nampt in Complex with an FK866-based inhibitor
Descriptor: 3-[(1E)-3-oxo-3-({4-[1-(phenylcarbonyl)piperidin-4-yl]butyl}amino)prop-1-en-1-yl]-1-beta-D-ribofuranosylpyridinium, Nicotinamide phosphoribosyltransferase
Authors:Kang, G.B, Bae, M.H, Kim, M.K, Im, I, Kim, Y.C, Eom, S.H.
Deposit date:2009-02-12
Release date:2009-08-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of Rattus norvegicus Visfatin/PBEF/Nampt in complex with an FK866-based inhibitor
Mol.Cells, 27, 2009
2ACJ
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BU of 2acj by Molmil
Crystal structure of the B/Z junction containing DNA bound to Z-DNA binding proteins
Descriptor: 5'-D(*AP*CP*GP*GP*TP*TP*TP*AP*TP*GP*GP*CP*GP*CP*GP*CP*G)-3', 5'-D(*GP*TP*CP*GP*CP*GP*CP*GP*CP*CP*AP*TP*AP*AP*AP*CP*C)-3', Double-stranded RNA-specific adenosine deaminase
Authors:Ha, S.C, Lowenhaupt, K, Rich, A, Kim, Y.-G, Kim, K.K.
Deposit date:2005-07-19
Release date:2005-10-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of a junction between B-DNA and Z-DNA reveals two extruded bases.
Nature, 437, 2005
8GSA
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BU of 8gsa by Molmil
Solution structure of holo acyl carrier protein A from Enterococcus faecalis
Descriptor: Acyl carrier protein
Authors:Yeon, J, Kim, Y.
Deposit date:2022-09-05
Release date:2023-03-29
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Structural study of acyl carrier protein of Enterococcus faecalis and its interaction with enzymes in de novo fatty acid synthesis.
Biochem.Biophys.Res.Commun., 637, 2022
7ROA
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BU of 7roa by Molmil
Crystal structure of EntV136 from Enterococcus faecalis
Descriptor: EntV
Authors:Stogios, P.J, Evdokimova, E, Kim, Y, Garsin, D, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2021-07-30
Release date:2022-10-12
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structural and functional analysis of EntV reveals a 12 amino acid fragment protective against fungal infections.
Nat Commun, 13, 2022
7VCJ
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Arginine kinase H227A from Daphnia magna
Descriptor: Arginine kinase, NITRATE ION, PHOSPHATE ION
Authors:Kim, D.S, Jang, K, Kim, W.S, Kim, Y.J, Park, J.H.
Deposit date:2021-09-03
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of H227A Mutant of Arginine Kinase in Daphnia magna Suggests the Importance of Its Stability.
Molecules, 27, 2022
5F51
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BU of 5f51 by Molmil
Structure of B. abortus WrbA-related protein A (apo)
Descriptor: NAD(P)H dehydrogenase (quinone), SULFATE ION
Authors:Herrou, J, Czyz, D, Willett, J.W, Kim, H.S, Kim, Y, Crosson, S.
Deposit date:2015-12-03
Release date:2016-03-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:WrpA Is an Atypical Flavodoxin Family Protein under Regulatory Control of the Brucella abortus General Stress Response System.
J.Bacteriol., 198, 2016
6MN5
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BU of 6mn5 by Molmil
Crystal structure of aminoglycoside acetyltransferase AAC(3)-IVa, H154A mutant, in complex with gentamicin C1A
Descriptor: (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL, 1,2-ETHANEDIOL, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ...
Authors:Stogios, P.J, Evdokimova, E, Kim, Y, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-10-01
Release date:2018-10-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Structural and molecular rationale for the diversification of resistance mediated by the Antibiotic_NAT family.
Commun Biol, 5, 2022
6V70
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BU of 6v70 by Molmil
Crystal Structure of Metallo Beta Lactamase from Hirschia baltica with Cadmium in the Active Site
Descriptor: 1,2-ETHANEDIOL, Beta-lactamase, CADMIUM ION, ...
Authors:Maltseva, N, Kim, Y, Clancy, S, Endres, M, Mulligan, R, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-12-06
Release date:2019-12-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of Metallo Beta Lactamase from Hirschia baltica.
To Be Published
2XMO
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BU of 2xmo by Molmil
The crystal structure of Lmo2642
Descriptor: CALCIUM ION, FE (III) ION, LMO2642 PROTEIN, ...
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2010-07-28
Release date:2011-02-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Functional Analysis of the Lmo2642 Cyclic Nucleotide Phosphodiesterase from Listeria Monocytogenes.
Proteins, 79, 2011
6V54
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BU of 6v54 by Molmil
Crystal Structure of Metallo Beta Lactamase from Hirschia baltica
Descriptor: 1,2-ETHANEDIOL, Beta-lactamase, CHLORIDE ION, ...
Authors:Maltseva, N, Kim, Y, Clancy, S, Endres, M, Mulligan, R, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-12-03
Release date:2019-12-25
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal Structure of Metallo Beta Lactamase from Hirschia baltica.
To Be Published
6V61
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BU of 6v61 by Molmil
Crystal Structure of Metallo Beta Lactamase from Hirschia baltica in the Complex with the Inhibitor Captopril
Descriptor: 1,2-ETHANEDIOL, Beta-lactamase, CHLORIDE ION, ...
Authors:Maltseva, N, Kim, Y, Clancy, S, Endres, M, Mulligan, R, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-12-04
Release date:2019-12-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal Structure of Metallo Beta Lactamase from Hirschia baltica in the Complex with the Inhibitor Captopril.
To Be Published
6V5M
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BU of 6v5m by Molmil
Crystal Structure of Metallo Beta Lactamase from Hirschia baltica in Complex with Succinate
Descriptor: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-lactamase, ...
Authors:Maltseva, N, Kim, Y, Clancy, S, Endres, M, Mulligan, R, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-12-04
Release date:2019-12-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of Metallo Beta Lactamase from Hirschia baltica in Complex with Succinate.
To Be Published
6V71
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BU of 6v71 by Molmil
Crystal Structure of Metallo Beta Lactamase from Hirschia baltica with Nitrate in the Active Site
Descriptor: 1,2-ETHANEDIOL, Beta-lactamase, FORMIC ACID, ...
Authors:Maltseva, N, Kim, Y, Clancy, S, Endres, M, Mulligan, R, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-12-06
Release date:2019-12-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structure of Metallo Beta Lactamase from Hirschia baltica with Nitrate in the Active Site
To Be Published
4YIR
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BU of 4yir by Molmil
Crystal structure of Rad4-Rad23 crosslinked to an undamaged DNA
Descriptor: DNA (5'-D(*AP*TP*TP*GP*TP*AP*GP*CP*G*GP*GP*GP*AP*TP*GP*TP*CP*GP*AP*GP*TP*CP*A)-3'), DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*(G47)P*AP*CP*AP*TP*CP*CP*CP*CP*CP*GP*CP*TP*AP*CP*AP*A)-3'), DNA repair protein RAD4, ...
Authors:Min, J.-H, Chen, X, Kim, Y.
Deposit date:2015-03-02
Release date:2015-03-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.0501 Å)
Cite:Kinetic gating mechanism of DNA damage recognition by Rad4/XPC.
Nat Commun, 6, 2015
6W4B
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BU of 6w4b by Molmil
The crystal structure of Nsp9 RNA binding protein of SARS CoV-2
Descriptor: Non-structural protein 9
Authors:Tan, K, Kim, Y, Jedrzejczak, R, Maltseva, N, Endres, M, Michalska, K, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-03-10
Release date:2020-03-18
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:The crystal structure of Nsp9 replicase protein of COVID-19
To Be Published
1TX6
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BU of 1tx6 by Molmil
trypsin:BBI complex
Descriptor: Bowman-Birk type trypsin inhibitor, CALCIUM ION, Trypsin
Authors:Song, H.K, Park, E.Y, Kim, J.A, Kim, H.W, Kim, Y.S.
Deposit date:2004-07-02
Release date:2005-03-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the Bowman-Birk inhibitor from barley seeds in ternary complex with porcine trypsin
J.Mol.Biol., 343, 2004
6WEN
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BU of 6wen by Molmil
Crystal Structure of ADP ribose phosphatase of NSP3 from SARS-CoV-2 in the apo form
Descriptor: CHLORIDE ION, Non-structural protein 3
Authors:Michalska, K, Stols, L, Jedrzejczak, R, Endres, M, Babnigg, G, Kim, Y, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-04-02
Release date:2020-04-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structures of SARS-CoV-2 ADP-ribose phosphatase: from the apo form to ligand complexes.
Iucrj, 7, 2020
6XMK
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BU of 6xmk by Molmil
1.70 A resolution structure of SARS-CoV-2 3CL protease in complex with inhibitor 7j
Descriptor: (1S,2S)-2-[(N-{[(4,4-difluorocyclohexyl)methoxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase, TETRAETHYLENE GLYCOL
Authors:Lovell, S, Kashipathy, M.M, Battaile, K.P, Rathnayake, A.D, Zheng, J, Kim, Y, Nguyen, H.N, Chang, K.O, Groutas, W.C.
Deposit date:2020-06-30
Release date:2020-07-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:3C-like protease inhibitors block coronavirus replication in vitro and improve survival in MERS-CoV-infected mice.
Sci Transl Med, 12, 2020
6V73
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BU of 6v73 by Molmil
Crystal Structure of Metallo Beta Lactamase from Erythrobacter litoralis with beta mercaptoethanol in the active site
Descriptor: BETA-MERCAPTOETHANOL, Beta-lactamase II, CHLORIDE ION, ...
Authors:Maltseva, N, Kim, Y, Clancy, S, Endres, M, Mulligan, R, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-12-06
Release date:2019-12-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Metallo Beta Lactamase from Erythrobacter litoralis with beta mercaptoethanol in the active site
To Be Published
7L52
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BU of 7l52 by Molmil
Crystal Structure of the Metallo Beta Lactamase L1 from Stenotrophomonas maltophilia Determined by Serial Crystallography
Descriptor: Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase), ZINC ION
Authors:Wilamowski, M, Kim, Y, Sherrell, D.A, Lavens, A, Maltseva, N, Endres, M, Babnigg, G, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-12-21
Release date:2020-12-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of the Metallo Beta Lactamase L1 from Stenotrophomonas maltophilia Determined by Serial Crystallography
To Be Published
7L91
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Structure of Metallo Beta-Lactamase L1 in a Complex with Hydrolyzed Moxalactam Determined by Pink-Beam Serial Crystallography
Descriptor: (2R)-2-[(R)-carboxy{[(2R)-2-carboxy-2-(4-hydroxyphenyl)acetyl]amino}methoxymethyl]-5-{[(1-methyl-1H-tetrazol-5-yl)sulfanyl]methyl}-3,6-dihydro-2H-1,3-oxazine-4-carboxylic acid, Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase), ZINC ION
Authors:Wilamowski, M, Kim, Y, Sherrell, D.A, Lavens, A, Henning, R, Maltseva, N, Endres, M, Babnigg, G, Vukica, S, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-01-01
Release date:2022-02-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Time-resolved beta-lactam cleavage by L1 metallo-beta-lactamase.
Nat Commun, 13, 2022
6LVU
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BU of 6lvu by Molmil
Crystal structure of apo acyl carrier protein from Thermotoga maritima
Descriptor: Acyl carrier protein, ZINC ION
Authors:Lee, Y, Lee, W.C, Kim, Y.
Deposit date:2020-02-05
Release date:2020-04-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.294 Å)
Cite:Structural Characterization of an ACP fromThermotoga maritima: Insights into Hyperthermal Adaptation.
Int J Mol Sci, 21, 2020
5F4B
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BU of 5f4b by Molmil
Structure of B. abortus WrbA-related protein A (WrpA)
Descriptor: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, NAD(P)H dehydrogenase (quinone)
Authors:Herrou, J, Czyz, D, Willett, J.W, Kim, H.S, Chhor, G, Endres, M, Babnigg, G, Kim, Y, Joachimiak, A, Crosson, S, Midwest Center for Structural Genomics (MCSG)
Deposit date:2015-12-03
Release date:2016-03-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.498 Å)
Cite:WrpA Is an Atypical Flavodoxin Family Protein under Regulatory Control of the Brucella abortus General Stress Response System.
J.Bacteriol., 198, 2016
6V72
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BU of 6v72 by Molmil
Crystal Structure of Metallo Beta Lactamase from Erythrobacter litoralis
Descriptor: 1,2-ETHANEDIOL, Beta-lactamase II, CALCIUM ION, ...
Authors:Maltseva, N, Kim, Y, Clancy, S, Endres, M, Mulligan, R, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-12-06
Release date:2019-12-25
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of Metallo Beta Lactamase from Erythrobacter litoralis
To Be Published
2C0J
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BU of 2c0j by Molmil
Crystal structure of the bet3-trs33 heterodimer
Descriptor: PALMITIC ACID, R32611_2, TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3
Authors:Kim, M.-S, Yi, M.-J, Lee, K.-H, Wagner, J, Munger, C, Kim, Y.-G, Whiteway, M, Cygler, M, Oh, B.-H, Sacher, M.
Deposit date:2005-09-03
Release date:2006-02-07
Last modified:2015-01-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biochemical and Crystallographic Studies Reveal a Specific Interaction between Trapp Subunits Trs33P and Bet3P
Traffic, 6, 2005

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