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PDB: 1086 件

3G8E
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Crystal Structure of Rattus norvegicus Visfatin/PBEF/Nampt in Complex with an FK866-based inhibitor
分子名称: 3-[(1E)-3-oxo-3-({4-[1-(phenylcarbonyl)piperidin-4-yl]butyl}amino)prop-1-en-1-yl]-1-beta-D-ribofuranosylpyridinium, Nicotinamide phosphoribosyltransferase
著者Kang, G.B, Bae, M.H, Kim, M.K, Im, I, Kim, Y.C, Eom, S.H.
登録日2009-02-12
公開日2009-08-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of Rattus norvegicus Visfatin/PBEF/Nampt in complex with an FK866-based inhibitor
Mol.Cells, 27, 2009
2ACJ
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Crystal structure of the B/Z junction containing DNA bound to Z-DNA binding proteins
分子名称: 5'-D(*AP*CP*GP*GP*TP*TP*TP*AP*TP*GP*GP*CP*GP*CP*GP*CP*G)-3', 5'-D(*GP*TP*CP*GP*CP*GP*CP*GP*CP*CP*AP*TP*AP*AP*AP*CP*C)-3', Double-stranded RNA-specific adenosine deaminase
著者Ha, S.C, Lowenhaupt, K, Rich, A, Kim, Y.-G, Kim, K.K.
登録日2005-07-19
公開日2005-10-25
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of a junction between B-DNA and Z-DNA reveals two extruded bases.
Nature, 437, 2005
8GSA
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BU of 8gsa by Molmil
Solution structure of holo acyl carrier protein A from Enterococcus faecalis
分子名称: Acyl carrier protein
著者Yeon, J, Kim, Y.
登録日2022-09-05
公開日2023-03-29
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Structural study of acyl carrier protein of Enterococcus faecalis and its interaction with enzymes in de novo fatty acid synthesis.
Biochem.Biophys.Res.Commun., 637, 2022
7ROA
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Crystal structure of EntV136 from Enterococcus faecalis
分子名称: EntV
著者Stogios, P.J, Evdokimova, E, Kim, Y, Garsin, D, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
登録日2021-07-30
公開日2022-10-12
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Structural and functional analysis of EntV reveals a 12 amino acid fragment protective against fungal infections.
Nat Commun, 13, 2022
7VCJ
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Arginine kinase H227A from Daphnia magna
分子名称: Arginine kinase, NITRATE ION, PHOSPHATE ION
著者Kim, D.S, Jang, K, Kim, W.S, Kim, Y.J, Park, J.H.
登録日2021-09-03
公開日2022-02-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal Structure of H227A Mutant of Arginine Kinase in Daphnia magna Suggests the Importance of Its Stability.
Molecules, 27, 2022
5F51
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Structure of B. abortus WrbA-related protein A (apo)
分子名称: NAD(P)H dehydrogenase (quinone), SULFATE ION
著者Herrou, J, Czyz, D, Willett, J.W, Kim, H.S, Kim, Y, Crosson, S.
登録日2015-12-03
公開日2016-03-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献WrpA Is an Atypical Flavodoxin Family Protein under Regulatory Control of the Brucella abortus General Stress Response System.
J.Bacteriol., 198, 2016
6MN5
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Crystal structure of aminoglycoside acetyltransferase AAC(3)-IVa, H154A mutant, in complex with gentamicin C1A
分子名称: (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL, 1,2-ETHANEDIOL, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ...
著者Stogios, P.J, Evdokimova, E, Kim, Y, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2018-10-01
公開日2018-10-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献Structural and molecular rationale for the diversification of resistance mediated by the Antibiotic_NAT family.
Commun Biol, 5, 2022
6V70
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Crystal Structure of Metallo Beta Lactamase from Hirschia baltica with Cadmium in the Active Site
分子名称: 1,2-ETHANEDIOL, Beta-lactamase, CADMIUM ION, ...
著者Maltseva, N, Kim, Y, Clancy, S, Endres, M, Mulligan, R, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-12-06
公開日2019-12-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal Structure of Metallo Beta Lactamase from Hirschia baltica.
To Be Published
2XMO
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The crystal structure of Lmo2642
分子名称: CALCIUM ION, FE (III) ION, LMO2642 PROTEIN, ...
著者Jeong, J.H, Kim, Y.G.
登録日2010-07-28
公開日2011-02-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and Functional Analysis of the Lmo2642 Cyclic Nucleotide Phosphodiesterase from Listeria Monocytogenes.
Proteins, 79, 2011
6V54
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Crystal Structure of Metallo Beta Lactamase from Hirschia baltica
分子名称: 1,2-ETHANEDIOL, Beta-lactamase, CHLORIDE ION, ...
著者Maltseva, N, Kim, Y, Clancy, S, Endres, M, Mulligan, R, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-12-03
公開日2019-12-25
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystal Structure of Metallo Beta Lactamase from Hirschia baltica.
To Be Published
6V61
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Crystal Structure of Metallo Beta Lactamase from Hirschia baltica in the Complex with the Inhibitor Captopril
分子名称: 1,2-ETHANEDIOL, Beta-lactamase, CHLORIDE ION, ...
著者Maltseva, N, Kim, Y, Clancy, S, Endres, M, Mulligan, R, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-12-04
公開日2019-12-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Crystal Structure of Metallo Beta Lactamase from Hirschia baltica in the Complex with the Inhibitor Captopril.
To Be Published
6V5M
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Crystal Structure of Metallo Beta Lactamase from Hirschia baltica in Complex with Succinate
分子名称: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-lactamase, ...
著者Maltseva, N, Kim, Y, Clancy, S, Endres, M, Mulligan, R, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-12-04
公開日2019-12-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Structure of Metallo Beta Lactamase from Hirschia baltica in Complex with Succinate.
To Be Published
6V71
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Crystal Structure of Metallo Beta Lactamase from Hirschia baltica with Nitrate in the Active Site
分子名称: 1,2-ETHANEDIOL, Beta-lactamase, FORMIC ACID, ...
著者Maltseva, N, Kim, Y, Clancy, S, Endres, M, Mulligan, R, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-12-06
公開日2019-12-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal Structure of Metallo Beta Lactamase from Hirschia baltica with Nitrate in the Active Site
To Be Published
4YIR
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Crystal structure of Rad4-Rad23 crosslinked to an undamaged DNA
分子名称: DNA (5'-D(*AP*TP*TP*GP*TP*AP*GP*CP*G*GP*GP*GP*AP*TP*GP*TP*CP*GP*AP*GP*TP*CP*A)-3'), DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*(G47)P*AP*CP*AP*TP*CP*CP*CP*CP*CP*GP*CP*TP*AP*CP*AP*A)-3'), DNA repair protein RAD4, ...
著者Min, J.-H, Chen, X, Kim, Y.
登録日2015-03-02
公開日2015-03-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.0501 Å)
主引用文献Kinetic gating mechanism of DNA damage recognition by Rad4/XPC.
Nat Commun, 6, 2015
6W4B
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BU of 6w4b by Molmil
The crystal structure of Nsp9 RNA binding protein of SARS CoV-2
分子名称: Non-structural protein 9
著者Tan, K, Kim, Y, Jedrzejczak, R, Maltseva, N, Endres, M, Michalska, K, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-03-10
公開日2020-03-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献The crystal structure of Nsp9 replicase protein of COVID-19
To Be Published
1TX6
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BU of 1tx6 by Molmil
trypsin:BBI complex
分子名称: Bowman-Birk type trypsin inhibitor, CALCIUM ION, Trypsin
著者Song, H.K, Park, E.Y, Kim, J.A, Kim, H.W, Kim, Y.S.
登録日2004-07-02
公開日2005-03-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the Bowman-Birk inhibitor from barley seeds in ternary complex with porcine trypsin
J.Mol.Biol., 343, 2004
6WEN
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BU of 6wen by Molmil
Crystal Structure of ADP ribose phosphatase of NSP3 from SARS-CoV-2 in the apo form
分子名称: CHLORIDE ION, Non-structural protein 3
著者Michalska, K, Stols, L, Jedrzejczak, R, Endres, M, Babnigg, G, Kim, Y, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-04-02
公開日2020-04-15
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Crystal structures of SARS-CoV-2 ADP-ribose phosphatase: from the apo form to ligand complexes.
Iucrj, 7, 2020
6XMK
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1.70 A resolution structure of SARS-CoV-2 3CL protease in complex with inhibitor 7j
分子名称: (1S,2S)-2-[(N-{[(4,4-difluorocyclohexyl)methoxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase, TETRAETHYLENE GLYCOL
著者Lovell, S, Kashipathy, M.M, Battaile, K.P, Rathnayake, A.D, Zheng, J, Kim, Y, Nguyen, H.N, Chang, K.O, Groutas, W.C.
登録日2020-06-30
公開日2020-07-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献3C-like protease inhibitors block coronavirus replication in vitro and improve survival in MERS-CoV-infected mice.
Sci Transl Med, 12, 2020
6V73
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Crystal Structure of Metallo Beta Lactamase from Erythrobacter litoralis with beta mercaptoethanol in the active site
分子名称: BETA-MERCAPTOETHANOL, Beta-lactamase II, CHLORIDE ION, ...
著者Maltseva, N, Kim, Y, Clancy, S, Endres, M, Mulligan, R, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-12-06
公開日2019-12-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of Metallo Beta Lactamase from Erythrobacter litoralis with beta mercaptoethanol in the active site
To Be Published
7L52
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Crystal Structure of the Metallo Beta Lactamase L1 from Stenotrophomonas maltophilia Determined by Serial Crystallography
分子名称: Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase), ZINC ION
著者Wilamowski, M, Kim, Y, Sherrell, D.A, Lavens, A, Maltseva, N, Endres, M, Babnigg, G, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-12-21
公開日2020-12-30
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal Structure of the Metallo Beta Lactamase L1 from Stenotrophomonas maltophilia Determined by Serial Crystallography
To Be Published
7L91
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Structure of Metallo Beta-Lactamase L1 in a Complex with Hydrolyzed Moxalactam Determined by Pink-Beam Serial Crystallography
分子名称: (2R)-2-[(R)-carboxy{[(2R)-2-carboxy-2-(4-hydroxyphenyl)acetyl]amino}methoxymethyl]-5-{[(1-methyl-1H-tetrazol-5-yl)sulfanyl]methyl}-3,6-dihydro-2H-1,3-oxazine-4-carboxylic acid, Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase), ZINC ION
著者Wilamowski, M, Kim, Y, Sherrell, D.A, Lavens, A, Henning, R, Maltseva, N, Endres, M, Babnigg, G, Vukica, S, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-01-01
公開日2022-02-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Time-resolved beta-lactam cleavage by L1 metallo-beta-lactamase.
Nat Commun, 13, 2022
6LVU
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Crystal structure of apo acyl carrier protein from Thermotoga maritima
分子名称: Acyl carrier protein, ZINC ION
著者Lee, Y, Lee, W.C, Kim, Y.
登録日2020-02-05
公開日2020-04-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.294 Å)
主引用文献Structural Characterization of an ACP fromThermotoga maritima: Insights into Hyperthermal Adaptation.
Int J Mol Sci, 21, 2020
5F4B
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Structure of B. abortus WrbA-related protein A (WrpA)
分子名称: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, NAD(P)H dehydrogenase (quinone)
著者Herrou, J, Czyz, D, Willett, J.W, Kim, H.S, Chhor, G, Endres, M, Babnigg, G, Kim, Y, Joachimiak, A, Crosson, S, Midwest Center for Structural Genomics (MCSG)
登録日2015-12-03
公開日2016-03-09
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.498 Å)
主引用文献WrpA Is an Atypical Flavodoxin Family Protein under Regulatory Control of the Brucella abortus General Stress Response System.
J.Bacteriol., 198, 2016
6V72
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Crystal Structure of Metallo Beta Lactamase from Erythrobacter litoralis
分子名称: 1,2-ETHANEDIOL, Beta-lactamase II, CALCIUM ION, ...
著者Maltseva, N, Kim, Y, Clancy, S, Endres, M, Mulligan, R, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-12-06
公開日2019-12-25
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Structure of Metallo Beta Lactamase from Erythrobacter litoralis
To Be Published
2C0J
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Crystal structure of the bet3-trs33 heterodimer
分子名称: PALMITIC ACID, R32611_2, TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3
著者Kim, M.-S, Yi, M.-J, Lee, K.-H, Wagner, J, Munger, C, Kim, Y.-G, Whiteway, M, Cygler, M, Oh, B.-H, Sacher, M.
登録日2005-09-03
公開日2006-02-07
最終更新日2015-01-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Biochemical and Crystallographic Studies Reveal a Specific Interaction between Trapp Subunits Trs33P and Bet3P
Traffic, 6, 2005

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