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PDB: 91 results

3R5Z
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BU of 3r5z by Molmil
Structure of a Deazaflavin-dependent reductase from Nocardia farcinica, with co-factor F420
Descriptor: COENZYME F420, Putative uncharacterized protein, SULFATE ION
Authors:Cellitti, S.E, Shaffer, J, Jones, D.H, Mukherjee, T, Gurumurthy, M, Bursulaya, B, Boshoff, H.I.M, Choi, I, Nayya, A, Lee, Y.S, Cherian, J, Niyomrattanakit, P, Dick, T, Manjunatha, U.H, Barry, C.E, Spraggon, G, Geierstanger, B.H.
Deposit date:2011-03-20
Release date:2012-01-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.503 Å)
Cite:Structure of Ddn, the deazaflavin-dependent nitroreductase from Mycobacterium tuberculosis involved in bioreductive activation of PA-824.
Structure, 20, 2012
3R5P
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BU of 3r5p by Molmil
Structure of Ddn, the Deazaflavin-dependent nitroreductase from Mycobacterium tuberculosis involved in bioreductive activation of PA-824
Descriptor: Deazaflavin-dependent nitroreductase, SULFATE ION
Authors:Cellitti, S.E, Shaffer, J, Jones, D.H, Mukherjee, T, Gurumurthy, M, Bursulaya, B, Boshoff, H.I.M, Choi, I, Nayya, A, Lee, Y.S, Cherian, J, Niyomrattanakit, P, Dick, T, Manjunatha, U.H, Barry, C.E, Spraggon, G, Geierstanger, B.H.
Deposit date:2011-03-19
Release date:2012-01-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of Ddn, the deazaflavin-dependent nitroreductase from Mycobacterium tuberculosis involved in bioreductive activation of PA-824.
Structure, 20, 2012
3R5Y
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BU of 3r5y by Molmil
Structure of a Deazaflavin-dependent nitroreductase from Nocardia farcinica, with co-factor F420
Descriptor: COENZYME F420, Putative uncharacterized protein
Authors:Cellitti, S.E, Shaffer, J, Jones, D.H, Mukherjee, T, Gurumurthy, M, Bursulaya, B, Boshoff, H.I.M, Choi, I, Nayya, A, Lee, Y.S, Cherian, J, Niyomrattanakit, P, Dick, T, Manjunatha, U.H, Barry, C.E, Spraggon, G, Geierstanger, B.H.
Deposit date:2011-03-20
Release date:2012-01-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Structure of Ddn, the deazaflavin-dependent nitroreductase from Mycobacterium tuberculosis involved in bioreductive activation of PA-824.
Structure, 20, 2012
3R5W
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BU of 3r5w by Molmil
Structure of Ddn, the Deazaflavin-dependent nitroreductase from Mycobacterium tuberculosis involved in bioreductive activation of PA-824, with co-factor F420
Descriptor: COENZYME F420, Deazaflavin-dependent nitroreductase
Authors:Cellitti, S.E, Shaffer, J, Jones, D.H, Mukherjee, T, Gurumurthy, M, Bursulaya, B, Boshoff, H.I.M, Choi, I, Nayya, A, Lee, Y.S, Cherian, J, Niyomrattanakit, P, Dick, T, Manjunatha, U.H, Barry, C.E, Spraggon, G, Geierstanger, B.H.
Deposit date:2011-03-20
Release date:2012-01-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.786 Å)
Cite:Structure of Ddn, the deazaflavin-dependent nitroreductase from Mycobacterium tuberculosis involved in bioreductive activation of PA-824.
Structure, 20, 2012
3Q8I
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BU of 3q8i by Molmil
Crystal structure of Anopheles Gambiae odorant binding protein 4 in complex with indole
Descriptor: INDOLE, Odorant binding protein, PHOSPHATE ION
Authors:Davrazou, F, Dong, E, Murphy, E.J, Jones, D.N.M.
Deposit date:2011-01-06
Release date:2011-08-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformational ordering plays a key role in regulating heterodimeric interactions between odorant binding proteins from Anopheles gambiae
To be Published
3R5L
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BU of 3r5l by Molmil
Structure of Ddn, the Deazaflavin-dependent nitroreductase from Mycobacterium tuberculosis involved in bioreductive activation of PA-824
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Deazaflavin-dependent nitroreductase
Authors:Cellitti, S.E, Shaffer, J, Jones, D.H, Mukherjee, T, Gurumurthy, M, Bursulaya, B, Boshoff, H.I.M, Choi, I, Nayyar, A, Lee, Y.S, Cherian, J, Niyomrattanakit, P, Dick, T, Manjunatha, U.H, Barry, C.E, Spraggon, G, Geierstanger, B.H.
Deposit date:2011-03-18
Release date:2012-01-18
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure of Ddn, the deazaflavin-dependent nitroreductase from Mycobacterium tuberculosis involved in bioreductive activation of PA-824.
Structure, 20, 2012
3QBZ
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BU of 3qbz by Molmil
Crystal structure of the Rad53-recognition domain of Saccharomyces cerevisiae Dbf4
Descriptor: DDK kinase regulatory subunit DBF4, SULFATE ION
Authors:Matthews, L.A, Jones, D.R, Prasad, A.A, Duncker, B.P, Guarne, A.
Deposit date:2011-01-14
Release date:2011-12-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.692 Å)
Cite:Saccharomyces cerevisiae Dbf4 has unique fold necessary for interaction with Rad53 kinase.
J.Biol.Chem., 287, 2012
8BXP
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BU of 8bxp by Molmil
SfGFP C148 F206 mutant
Descriptor: Green fluorescent protein
Authors:Ahmed, R.D, Rizkallah, P.J, Jones, D.D.
Deposit date:2022-12-09
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:SfGFP C148 F206 mutant
To Be Published
8C1X
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BU of 8c1x by Molmil
sfGFP C148 F206 mutant
Descriptor: Green fluorescent protein
Authors:Ahmed, R.D, Rizkallah, P.J, Jones, D.D.
Deposit date:2022-12-21
Release date:2024-01-10
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:sfGFP C148 F206 mutant
To Be Published
2QDI
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BU of 2qdi by Molmil
Drosophila OBP LUSH D118A mutation
Descriptor: General odorant-binding protein lush, TRIETHYLENE GLYCOL
Authors:Laughlin, J.D, Jones, D.N.M.
Deposit date:2007-06-20
Release date:2008-06-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Activation of pheromone-sensitive neurons is mediated by conformational activation of pheromone-binding protein.
Cell(Cambridge,Mass.), 133, 2008
2K7V
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BU of 2k7v by Molmil
Deletions in a surface loop divert the folding of a protein domain into a metastable dimeric form
Descriptor: Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
Authors:Stott, K.M, Yusof, A.M, Perham, R.N, Jones, D.D.
Deposit date:2008-08-27
Release date:2009-09-15
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:A surface loop directs conformational switching of a lipoyl domain between a folded and a novel misfolded structure.
Structure, 17, 2009
2X8J
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BU of 2x8j by Molmil
Intracellular subtilisin precursor from B. clausii
Descriptor: GLYCEROL, INTRACELLULAR SUBTILISIN PROTEASE, PENTAETHYLENE GLYCOL, ...
Authors:Vedodova, J, Gamble, M, Ariza, A, Dodson, E, Jones, D.D, Wilson, K.S.
Deposit date:2010-03-09
Release date:2010-08-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Crystal structure of an intracellular subtilisin reveals novel structural features unique to this subtilisin family.
Structure, 18, 2010
6SMS
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BU of 6sms by Molmil
Vegetative Insecticidal Protein 1 (Vip1Ac1) from Bacillus thuringiensis
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, SULFATE ION, ...
Authors:Rizkallah, P.J, Al-Maslookhi, H.S, Berry, C, Jones, D.
Deposit date:2019-08-22
Release date:2021-02-10
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Bacillus thuringiensis insecticidal protein 1Ac, VIP1Ac
Not Published
2WWT
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BU of 2wwt by Molmil
Intracellular subtilisin precursor from B. clausii
Descriptor: INTRACELLULAR SUBTILISIN PROTEASE, SODIUM ION
Authors:Vevodova, J, Gamble, M, Ariza, A, Dodson, E, Jones, D.D, Wilson, K.S.
Deposit date:2009-10-27
Release date:2010-09-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Crystal Structure of an Intracellular Subtilisin Reveals Novel Structural Features Unique to This Subtilisin Family.
Structure, 18, 2010
2WV7
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BU of 2wv7 by Molmil
Intracellular subtilisin precursor from B. clausii
Descriptor: INTRACELLULAR SUBTILISIN PROTEASE, SODIUM ION
Authors:Vevodova, J, Gamble, M, Ariza, A, Dodson, E, Jones, D.D, Wilson, K.S.
Deposit date:2009-10-15
Release date:2010-09-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal Structure of an Intracellular Subtilisin Reveals Novel Structural Features Unique to This Subtilisin Family.
Structure, 18, 2010
2XRM
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BU of 2xrm by Molmil
Processed Intracellular subtilisin from B. clausii
Descriptor: CALCIUM ION, INTRACELLULAR SUBTILISIN PROTEASE, PENTAETHYLENE GLYCOL, ...
Authors:Gamble, M, Kunze, G, Dodson, E.J, Jones, D.D, Wilson, K.S.
Deposit date:2010-09-20
Release date:2011-03-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Regulation of an Intracellular Subtilisin Protease Activity by a Short Propeptide Sequence Through an Original Combined Dual Mechanism.
Proc.Natl.Acad.Sci.USA, 108, 2011
5ANT
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BU of 5ant by Molmil
Potent and selective inhibitors of MTH1 probe its role in cancer cell survival
Descriptor: 2-(2-methoxyethoxy)-6-(methylamino)-9-(phenylmethyl)-7H-purin-8-one, 7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE
Authors:Kettle, J.G, Alwan, H, Bista, M, Breed, J, Kack, H, Eckersley, K, Foote, K.M, Fillery, S, Goodwin, L, Jones, D, Lau, A, Nissink, J.W.M, Read, J, Scott, J, Taylor, B, Walker, G, Wissler, L.
Deposit date:2015-09-08
Release date:2016-03-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Potent and Selective Inhibitors of Mth1 Probe its Role in Cancer Cell Survival.
J.Med.Chem., 59, 2016
7KG1
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BU of 7kg1 by Molmil
Structure of human PARG complexed with PARG-002
Descriptor: 1,3-dimethyl-8-{[2-(morpholin-4-yl)ethyl]amino}-3,7-dihydro-1H-purine-2,6-dione, CACODYLATE ION, DIMETHYL SULFOXIDE, ...
Authors:Brosey, C.A, Balapiti-Modarage, L.P.F, Warden, L.S, Jones, D.E, Ahmed, Z, Tainer, J.A.
Deposit date:2020-10-15
Release date:2021-03-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Targeting SARS-CoV-2 Nsp3 macrodomain structure with insights from human poly(ADP-ribose) glycohydrolase (PARG) structures with inhibitors.
Prog.Biophys.Mol.Biol., 163, 2021
7KG7
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BU of 7kg7 by Molmil
Structure of human PARG complexed with PARG-292
Descriptor: 8-{[2-(1,1-dioxo-1lambda~6~,4-thiazinan-4-yl)ethyl]sulfanyl}-1,3-dimethyl-3,7-dihydro-1H-purine-2,6-dione, DIMETHYL SULFOXIDE, Poly(ADP-ribose) glycohydrolase, ...
Authors:Brosey, C.A, Balapiti-Modarage, L.P.F, Warden, L.S, Jones, D.E, Ahmed, Z, Tainer, J.A.
Deposit date:2020-10-16
Release date:2021-03-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Targeting SARS-CoV-2 Nsp3 macrodomain structure with insights from human poly(ADP-ribose) glycohydrolase (PARG) structures with inhibitors.
Prog.Biophys.Mol.Biol., 163, 2021
7KG0
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BU of 7kg0 by Molmil
Structure of human PARG complexed with PARG-131
Descriptor: 1,2-ETHANEDIOL, 5-({4-[(1,3-dimethyl-2,6-dioxo-1,2,3,6-tetrahydro-7H-purin-7-yl)methyl]phenyl}methyl)pyrimidine-2,4,6(1H,3H,5H)-trione, Poly(ADP-ribose) glycohydrolase, ...
Authors:Arvai, A, Bommagani, S, Brosey, C.A, Jones, D.E, Warden, L.S, Ahmed, Z, Tainer, J.A.
Deposit date:2020-10-15
Release date:2021-03-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Targeting SARS-CoV-2 Nsp3 macrodomain structure with insights from human poly(ADP-ribose) glycohydrolase (PARG) structures with inhibitors.
Prog.Biophys.Mol.Biol., 163, 2021
7KG6
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BU of 7kg6 by Molmil
Structure of human PARG complexed with PARG-322
Descriptor: 1-{2-[(1,3-dimethyl-2,6-dioxo-2,3,6,7-tetrahydro-1H-purin-8-yl)sulfanyl]ethyl}piperidine-4-carboxylic acid, Poly(ADP-ribose) glycohydrolase
Authors:Brosey, C.A, Balapiti-Modarage, L.P.F, Warden, L.S, Jones, D.E, Ahmed, Z, Tainer, J.A.
Deposit date:2020-10-16
Release date:2021-03-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Targeting SARS-CoV-2 Nsp3 macrodomain structure with insights from human poly(ADP-ribose) glycohydrolase (PARG) structures with inhibitors.
Prog.Biophys.Mol.Biol., 163, 2021
7KG8
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BU of 7kg8 by Molmil
Structure of human PARG complexed with PARG-061
Descriptor: 1,3-dimethyl-8-{[2-(morpholin-4-yl)-2-oxoethyl]sulfanyl}-6-sulfanylidene-1,3,6,7-tetrahydro-2H-purin-2-one, CACODYLATE ION, DIMETHYL SULFOXIDE, ...
Authors:Brosey, C.A, Balapiti-Modarage, L.P.F, Warden, L.S, Jones, D.E, Ahmed, Z, Tainer, J.A.
Deposit date:2020-10-16
Release date:2021-03-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Targeting SARS-CoV-2 Nsp3 macrodomain structure with insights from human poly(ADP-ribose) glycohydrolase (PARG) structures with inhibitors.
Prog.Biophys.Mol.Biol., 163, 2021
7KG3
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BU of 7kg3 by Molmil
Crystal structure of CoV-2 Nsp3 Macrodomain
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, MALONATE ION, ...
Authors:Arvai, A, Brosey, C.A, Link, T, Jones, D.E, Ahmed, Z, Tainer, J.A.
Deposit date:2020-10-15
Release date:2020-10-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Targeting SARS-CoV-2 Nsp3 macrodomain structure with insights from human poly(ADP-ribose) glycohydrolase (PARG) structures with inhibitors.
Prog.Biophys.Mol.Biol., 163, 2021
5ANS
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BU of 5ans by Molmil
Potent and selective inhibitors of MTH1 probe its role in cancer cell survival
Descriptor: 1-[4-amino-2-(ethoxymethyl)-1H-imidazo[4,5-c]quinolin-1-yl]-2-methylpropan-2-ol, 7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE
Authors:Kettle, J.G, Alwan, H, Bista, M, Breed, J, Kack, H, Eckersley, K, Foote, K.M, Fillery, S, Goodwin, L, Jones, D, Lau, A, Nissink, J.W.M, Read, J, Scott, J, Taylor, B, Walker, G, Wissler, L.
Deposit date:2015-09-08
Release date:2016-03-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Potent and Selective Inhibitors of Mth1 Probe its Role in Cancer Cell Survival.
J.Med.Chem., 59, 2016
7KXB
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BU of 7kxb by Molmil
Crystal structure of SARS-CoV-2 Nsp3 Macrodomain complex with PARG329
Descriptor: BETA-MERCAPTOETHANOL, N-{3-[(1,3-dimethyl-2,6-dioxo-2,3,6,9-tetrahydro-1H-purin-8-yl)sulfanyl]propyl}-N'-[2-(morpholin-4-yl)ethyl]thiourea, Non-structural protein 3, ...
Authors:Arvai, A, Brosey, C.A, Bommagani, S, Link, T, Jones, D.E, Ahmed, Z, Tainer, J.A.
Deposit date:2020-12-03
Release date:2021-02-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Targeting SARS-CoV-2 Nsp3 macrodomain structure with insights from human poly(ADP-ribose) glycohydrolase (PARG) structures with inhibitors.
Prog.Biophys.Mol.Biol., 163, 2021

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