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PDB: 18 件
2K69
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NMR solution structure of modified DNA containing imidazole nucleosides at basic pH
分子名称: DNA (5'-D(*DTP*DTP*DAP*DAP*DTP*DTP*DTP*(D33)P*(D33)P*(D33)P*DAP*DAP*DAP*DTP*DTP*DAP*DA)-3')
著者Johannsen, S, Boehme, D, Duepre, N, Mueller, J, Sigel, R.K.O.
登録日2008-07-04
公開日2009-07-07
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure at different pHs of a DNA hairpin containing artificial nucleotides
To be Published
2K68
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BU of 2k68 by Molmil
NMR solution structure of modified DNA containing imidazole nucleosides at neutral pH
分子名称: DNA (5'-D(*DTP*DTP*DAP*DAP*DTP*DTP*DTP*(D33)P*(D33)P*(D33)P*DAP*DAP*DAP*DTP*DTP*DAP*DA)-3')
著者Johannsen, S, Boehme, D, Duepre, N, Mueller, J, Sigel, R.K.O.
登録日2008-07-04
公開日2009-07-07
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure at different pHs of a DNA hairpin containing artificial nucleotides
To be Published
2KE8
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BU of 2ke8 by Molmil
NMR solution structure of metal-modified DNA
分子名称: DNA (5'-D(*TP*TP*AP*AP*TP*TP*TP*(D33)P*(D33)P*(D33)P*AP*AP*AP*TP*TP*AP*A)-3'), SILVER ION
著者Johannsen, S, Duepre, N, Boehme, D, Mueller, J, Sigel, R.K.O.
登録日2009-01-27
公開日2010-02-09
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of a DNA double helix with consecutive metal-mediated base pairs.
Nat.Chem., 2, 2010
2K67
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NMR solution structure of modified DNA containing imidazole nucleosides at acidic pH
分子名称: DNA (5'-D(*DTP*DTP*DAP*DAP*DTP*DTP*DTP*(D33)P*(D33)P*(D33)P*DAP*DAP*DAP*DTP*DTP*DAP*DA)-3')
著者Johannsen, S, Boehme, D, Duepre, N, Mueller, J, Sigel, R.K.O.
登録日2008-07-04
公開日2009-07-07
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure at different pHs of a DNA hairpin containing artificial nucleotides
To be Published
7QA2
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BU of 7qa2 by Molmil
Solution structure of an intramolecular RNA G-quadruplex formed by the 6A mutant from a 22mer guanine-rich sequence within the 5'UTR of BCL-2 proto-oncogene
分子名称: RNA (5'-R(*GP*GP*GP*CP*CP*AP*UP*GP*GP*GP*GP*UP*GP*GP*GP*AP*GP*CP*UP*GP*GP*G)-3')
著者Wang, Z, Falk, T, Jurt, S, Johannsen, S, Sigel, R.K.O.
登録日2021-11-15
公開日2022-11-23
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Solution structure of an intramolecular RNA G-quadruplex formed by the 6A mutant from a 22mer guanine-rich sequence within the 5'UTR of BCL-2 proto-oncogene
To Be Published
6RLS
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BU of 6rls by Molmil
Concerted dynamics of metallo-base pairs in an A/B-form helical transition (apo species)
分子名称: DNA (5'-D(*CP*GP*TP*CP*TP*CP*AP*TP*GP*AP*TP*AP*CP*G)-3')_apo
著者Schmidt, O.P, Jurt, S, Johannsen, S, Karimi, A, Sigel, R.K.O, Luedtke, N.W.
登録日2019-05-02
公開日2019-10-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Concerted dynamics of metallo-base pairs in an A/B-form helical transition.
Nat Commun, 10, 2019
7Q48
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Solution structure of an intramolecular RNA G-quadruplex formed by the 6A8U17U mutant from a 22mer guanine-rich sequence within the 5'UTR of BCL-2 proto onco-gene
分子名称: RNA (5'-R(*GP*GP*GP*CP*CP*AP*UP*UP*GP*GP*GP*UP*GP*GP*GP*AP*UP*CP*UP*GP*GP*G)-3')
著者Wang, Z, Jurt, S, Dominguez-Martin, A, Johannsen, S, Sigel, R.K.O.
登録日2021-10-29
公開日2022-11-16
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Solution structure of an intramolecular RNA G-quadruplex formed by the 6A8U17U mutant from a 22mer guanine-rich sequence within the 5'UTR of BCL-2 proto onco-gene
To Be Published
7Q6L
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BU of 7q6l by Molmil
Solution structure of an intramolecular RNA G-quadruplex formed by the 6A8A17U mutant from a 22mer guanine-rich sequence within the 5'UTR of BCL-2 proto-oncogene
分子名称: RNA (5'-R(*GP*GP*GP*CP*CP*AP*UP*AP*GP*GP*GP*UP*GP*GP*GP*AP*UP*CP*UP*GP*GP*G)-3')
著者Wang, Z, Jurt, S, Dominguez-Martin, A, Johannsen, S, Sigel, R.K.O.
登録日2021-11-08
公開日2022-11-16
最終更新日2024-01-31
実験手法SOLUTION NMR
主引用文献Solution structure of an intramolecular RNA G-quadruplex formed by the 6A8A17U mutant from a 22mer guanine-rich sequence within the 5'UTR of BCL-2 proto-oncogene
To Be Published
7QR4
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human CPEB3 HDV-like ribozyme
分子名称: RNA CPEB3 ribozyme, U1 small nuclear ribonucleoprotein A
著者Przytula-Mally, A.I, Engilberge, S, Johannsen, S, Olieric, V, Masquida, B, Sigel, R.K.O.
登録日2022-01-17
公開日2022-10-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Anticodon-like loop-mediated dimerization in the crystal structures of HdV-like CPEB3 ribozymes
Biorxiv, 2022
7QR3
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Chimpanzee CPEB3 HDV-like ribozyme
分子名称: GLYCEROL, POTASSIUM ION, U1 small nuclear ribonucleoprotein A, ...
著者Przytula-Mally, A.I, Engilberge, S, Johannsen, S, Olieric, V, Masquida, B, Sigel, R.K.O.
登録日2022-01-10
公開日2022-10-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Anticodon-like loop-mediated dimerization in the crystal structures of HdV-like CPEB3 ribozymes
Biorxiv, 2022
2MFP
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BU of 2mfp by Molmil
Solution structure of the circular g-domain analog from the wheat metallothionein Ec-1
分子名称: CADMIUM ION, EC protein I/II
著者Tarasava, K, Johannsen, S, Freisinger, E.
登録日2013-10-14
公開日2013-11-27
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Solution Structure of the Circular gamma-Domain Analog from the Wheat Metallothionein Ec-1.
Molecules, 18, 2013
6EZ0
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BU of 6ez0 by Molmil
Specific phosphorothioate substitution within domain 6 of a group II intron ribozyme leads to changes in local structure and metal ion binding
分子名称: RNA (27-MER)
著者Erat, M.C, Besic, E, Oberhuber, M, Johannsen, S, Sigel, R.K.O.
登録日2017-11-13
公開日2018-01-03
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Specific phosphorothioate substitution within domain 6 of a group II intron ribozyme leads to changes in local structure and metal ion binding.
J. Biol. Inorg. Chem., 23, 2018
6FY6
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BU of 6fy6 by Molmil
Concerted dynamics of metallo-base pairs in an A/B-form helical transition (major species)
分子名称: DNA (5'-D(*CP*GP*TP*CP*TP*CP*AP*TP*GP*AP*TP*AP*CP*G)-3')_major, MERCURY (II) ION
著者Schmidt, O.P, Jurt, S, Johannsen, S, Karimi, A, Sigel, R.K.O, Luedtke, N.W.
登録日2018-03-11
公開日2019-10-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Concerted dynamics of metallo-base pairs in an A/B-form helical transition.
Nat Commun, 10, 2019
6FY7
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BU of 6fy7 by Molmil
Concerted dynamics of metallo-base pairs in an A/B-form helical transition (minor species)
分子名称: DNA (5'-D(*CP*GP*TP*CP*TP*CP*AP*TP*GP*AP*TP*AP*CP*G)-3')_minor, MERCURY (II) ION
著者Schmidt, O.P, Jurt, S, Johannsen, S, Karimi, A, Sigel, R.K.O, Luedtke, N.W.
登録日2018-03-11
公開日2019-10-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Concerted dynamics of metallo-base pairs in an A/B-form helical transition.
Nat Commun, 10, 2019
2M54
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BU of 2m54 by Molmil
Refined NMR solution structure of metal-modified DNA
分子名称: DNA (5'-D(*TP*TP*AP*AP*TP*TP*TP*(D33)P*(D33)P*(D33)P*AP*AP*AP*TP*TP*AP*A)-3'), SILVER ION
著者Kumbhar, S, Johannsen, S, Sigel, R.K, Waller, M.P, Mueller, J.
登録日2013-02-13
公開日2013-05-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A QM/MM refinement of an experimental DNA structure with metal-mediated base pairs.
J.Inorg.Biochem., 127, 2013
6GMY
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BU of 6gmy by Molmil
Tc-DNA/RNA duplex
分子名称: RNA (5'-R(*GP*UP*AP*AP*GP*CP*CP*GP*AP*G)-3'), Tc-DNA (5'-(*(TCJ)P*(TTK)P*(TCJ)P*(TCS)P*(TCS)P*(TCJ)P*(TTK)P*(TTK)P*(TCY)P*(TCJ))-3')
著者Istrate, A, Johannsen, S, Istrate, A, Sigel, R.K.O, Leumann, C.
登録日2018-05-28
公開日2018-06-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR solution structure of tricyclo-DNA containing duplexes: insight into enhanced thermal stability and nuclease resistance.
Nucleic Acids Res., 47, 2019
6GPI
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Tc-DNA/DNA duplex
分子名称: DNA (5'-D(*GP*TP*AP*AP*GP*CP*CP*GP*AP*G)-3'), tc-DNA (5'-D(*(TCJ)P*(TTK)P*(TCJ)P*(TCS)P*(TCS)P*(TCJ)P*(TTK)P*(TTK)P*(TCY)P*(TCJ))-3')
著者Istrate, A, Johannsen, S, Istrate, A, Sigel, R.K.O, Leumann, C.
登録日2018-06-05
公開日2018-06-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR solution structure of tricyclo-DNA containing duplexes: insight into enhanced thermal stability and nuclease resistance.
Nucleic Acids Res., 47, 2019
6GN4
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tc-DNA/tc-DNA duplex
分子名称: Tc-DNA (5'-D(*(TCJ)P*(TTK)P*(TCJ)P*(TCS)P*(TCS)P*(TCJ)P*(TTK)P*(TTK)P*(TCY)P*(TCJ))-3'), Tc-DNA (5'-D(*(TCS)P*(TTK)P*(TCY)P*(TCY)P*(TCS)P*(TCJ)P*(TCJ)P*(TCS)P*(TCY)P*(TCS))-3')
著者Istrate, A, Johannsen, S, Istrate, A, Sigel, R.K.O, Leumann, C.
登録日2018-05-29
公開日2018-06-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR solution structure of tricyclo-DNA containing duplexes: insight into enhanced thermal stability and nuclease resistance.
Nucleic Acids Res., 47, 2019

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件を2024-10-30に公開中

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