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PDB: 124 results

8SP7
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BU of 8sp7 by Molmil
LINE-1 retrotransposon endonuclease domain complex with tranexamic acid
Descriptor: LINE-1 retrotransposon endonuclease, SULFATE ION, TRANS-4-AMINOMETHYLCYCLOHEXANE-1-CARBOXYLIC ACID
Authors:D'Ordine, A.M, Jogl, G, Sedivy, J.M.
Deposit date:2023-05-02
Release date:2024-05-22
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Identification and characterization of small molecule inhibitors of the LINE-1 retrotransposon endonuclease.
Nat Commun, 15, 2024
4X3M
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BU of 4x3m by Molmil
Crystal Structure of TTHA0275 from Thermus thermophilus (HB8) in complex with Adenosine in space group P212121
Descriptor: ADENOSINE, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Demirci, H, Belardinelli, R, Jogl, G.
Deposit date:2014-12-01
Release date:2015-11-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:Crystal Structure of TTHA0275 from Thermus thermophilus (HB8)
To Be Published
4X3L
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BU of 4x3l by Molmil
Crystal Structure of TTHA0275 from Thermus thermophilus (HB8) in complex with 5'-methylthioadenosine in space group P21212
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, CHLORIDE ION, RNA 2'-O ribose methyltransferase
Authors:Demirci, H, Belardinelli, R, Jogl, G.
Deposit date:2014-12-01
Release date:2016-01-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of TTHA0275 from Thermus thermophilus (HB8)
To Be Published
8SP5
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LINE-1 retrotransposon endonuclease domain complex with Mn2+
Descriptor: LINE-1 retrotransposon endonuclease, MANGANESE (II) ION, SULFATE ION
Authors:D'Ordine, A.M, Jogl, G, Sedivy, J.M.
Deposit date:2023-05-02
Release date:2024-05-22
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Identification and characterization of small molecule inhibitors of the LINE-1 retrotransposon endonuclease.
Nat Commun, 15, 2024
4NXN
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BU of 4nxn by Molmil
Crystal Structure of the 30S ribosomal subunit from a GidB (RsmG) mutant of Thermus thermophilus (HB8), bound with streptomycin
Descriptor: 16S rRNA, MAGNESIUM ION, STREPTOMYCIN, ...
Authors:Demirci, H, Murphy IV, F, Murphy, E, Gregory, S.T, Dahlberg, A.E, Jogl, G.
Deposit date:2013-12-09
Release date:2014-05-21
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (3.544 Å)
Cite:A structural basis for streptomycin resistance
To be Published
4NXM
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Crystal Structure of the 30S ribosomal subunit from a GidB (RsmG) mutant of Thermus thermophilus (HB8)
Descriptor: 16S rRNA, MAGNESIUM ION, ZINC ION, ...
Authors:Demirci, H, Murphy IV, F, Murphy, E, Gregory, S.T, Dahlberg, A.E, Jogl, G.
Deposit date:2013-12-09
Release date:2014-05-21
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (3.65 Å)
Cite:A structural basis for streptomycin resistance
To be Published
2RDS
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BU of 2rds by Molmil
Crystal Structure of PtlH with Fe/oxalylglycine and ent-1-deoxypentalenic acid bound
Descriptor: (1S,3aS,5aR,8aS)-1,7,7-trimethyl-1,2,3,3a,5a,6,7,8-octahydrocyclopenta[c]pentalene-4-carboxylic acid, 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II)/alpha-ketoglutarate dependent hydroxylase, FE (III) ION, ...
Authors:You, Z, Omura, S, Ikeda, H, Cane, D.E, Jogl, G.
Deposit date:2007-09-24
Release date:2007-10-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal Structure of the Non-heme Iron Dioxygenase PtlH in Pentalenolactone Biosynthesis.
J.Biol.Chem., 282, 2007
4G3T
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Mycobacterium smegmatis DprE1 - hexagonal crystal form
Descriptor: oxidoreductase DprE1
Authors:Li, H, Jogl, G.
Deposit date:2012-07-15
Release date:2012-12-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.346 Å)
Cite:Crystal structure of decaprenylphosphoryl-beta- D-ribose 2'-epimerase from Mycobacterium smegmatis.
Proteins, 81, 2013
4G3U
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BU of 4g3u by Molmil
Mycobacterium smegmatis DprE1 - monoclinic crystal form
Descriptor: oxidoreductase DprE1
Authors:Li, H, Jogl, G.
Deposit date:2012-07-15
Release date:2012-12-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.689 Å)
Cite:Crystal structure of decaprenylphosphoryl-beta- D-ribose 2'-epimerase from Mycobacterium smegmatis.
Proteins, 81, 2013
6O56
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BU of 6o56 by Molmil
HNH Nuclease from S. pyogenes Cas9
Descriptor: CRISPR-associated endonuclease Cas9/Csn1
Authors:Newton, J.C, Lisi, G.P, Jogl, G.
Deposit date:2019-03-01
Release date:2020-01-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Allosteric Motions of the CRISPR-Cas9 HNH Nuclease Probed by NMR and Molecular Dynamics.
J.Am.Chem.Soc., 142, 2020
2RDR
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BU of 2rdr by Molmil
Crystal Structure of PtlH with Fe/oxalylglycine bound
Descriptor: 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II)/alpha-ketoglutarate dependent hydroxylase, FE (III) ION, MAGNESIUM ION, ...
Authors:You, Z, Omura, S, Ikeda, H, Cane, D.E, Jogl, G.
Deposit date:2007-09-24
Release date:2007-10-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the Non-heme Iron Dioxygenase PtlH in Pentalenolactone Biosynthesis.
J.Biol.Chem., 282, 2007
2RDQ
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BU of 2rdq by Molmil
Crystal Structure of PtlH with Fe/alpha ketoglutarate bound
Descriptor: 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II)/alpha-ketoglutarate dependent hydroxylase, 2-OXOGLUTARIC ACID, FE (III) ION, ...
Authors:You, Z, Omura, S, Ikeda, H, Cane, D.E, Jogl, G.
Deposit date:2007-09-24
Release date:2007-10-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Crystal Structure of the Non-heme Iron Dioxygenase PtlH in Pentalenolactone Biosynthesis.
J.Biol.Chem., 282, 2007
3OTO
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BU of 3oto by Molmil
Crystal Structure of the 30S ribosomal subunit from a KsgA mutant of Thermus thermophilus (HB8)
Descriptor: 16S rRNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
Authors:Demirci, H, Murphy IV, F, Belardinelli, R, Kelley, A.C, Ramakrishnan, V, Gregory, S.T, Dahlberg, A.E, Jogl, G.
Deposit date:2010-09-13
Release date:2010-09-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.69 Å)
Cite:Modification of 16S ribosomal RNA by the KsgA methyltransferase restructures the 30S subunit to optimize ribosome function.
Rna, 16, 2010
1T77
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BU of 1t77 by Molmil
Crystal structure of the PH-BEACH domains of human LRBA/BGL
Descriptor: Lipopolysaccharide-responsive and beige-like anchor protein
Authors:Gebauer, D, Li, J, Jogl, G, Shen, Y, Myszka, D.G, Tong, L.
Deposit date:2004-05-08
Release date:2004-12-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of the PH-BEACH Domains of Human LRBA/BGL
Biochemistry, 43, 2004
1I45
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BU of 1i45 by Molmil
YEAST TRIOSEPHOSPHATE ISOMERASE (MUTANT)
Descriptor: TRIOSEPHOSPHATE ISOMERASE
Authors:Rozovsky, S, Jogl, G, Tong, L, McDermott, A.E.
Deposit date:2001-02-19
Release date:2001-06-30
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Solution-state NMR investigations of triosephosphate isomerase active site loop motion: ligand release in relation to active site loop dynamics.
J.Mol.Biol., 310, 2001
3M6U
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BU of 3m6u by Molmil
Multi-site-specific 16S rRNA methyltransferase RsmF from Thermus thermophilus in space group 43
Descriptor: SULFATE ION, rRNA methylase
Authors:Demirci, H, Larsen, H.G.L, Hansen, T, Rasmussen, A, Cadambi, A, Gregory, S.T, Kirpekar, F, Jogl, G.
Deposit date:2010-03-16
Release date:2010-03-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.402 Å)
Cite:Multi-site-specific 16S rRNA methyltransferase RsmF from Thermus thermophilus.
Rna, 16, 2010
1T7Q
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BU of 1t7q by Molmil
Crystal structure of the F565A mutant of murine carnitine acetyltransferase in complex with carnitine and CoA
Descriptor: 1,2-ETHANEDIOL, CARNITINE, COENZYME A, ...
Authors:Hsiao, Y.-S, Jogl, G, Tong, L.
Deposit date:2004-05-10
Release date:2004-06-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and biochemical studies of the substrate selectivity of carnitine acetyltransferase
J.Biol.Chem., 279, 2004
3M6V
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BU of 3m6v by Molmil
Multi-site-specific 16S rRNA methyltransferase RsmF from Thermus thermophilus in space group P2 in complex with S-Adenosyl-L-Methionine
Descriptor: S-ADENOSYLMETHIONINE, rRNA methylase
Authors:Demirci, H, Larsen, H.G.L, Hansen, T, Rasmussen, A, Cadambi, A, Gregory, S.T, Kirpekar, F, Jogl, G.
Deposit date:2010-03-16
Release date:2010-03-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Multi-site-specific 16S rRNA methyltransferase RsmF from Thermus thermophilus.
Rna, 16, 2010
3M6X
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BU of 3m6x by Molmil
Multi-site-specific 16S rRNA methyltransferase RsmF from Thermus thermophilus in space group P21212
Descriptor: CHLORIDE ION, rRNA methylase
Authors:Demirci, H, Larsen, H.G.L, Hansen, T, Rasmussen, A, Cadambi, A, Gregory, S.T, Kirpekar, F, Jogl, G.
Deposit date:2010-03-16
Release date:2010-03-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.676 Å)
Cite:Multi-site-specific 16S rRNA methyltransferase RsmF from Thermus thermophilus.
Rna, 16, 2010
3M6W
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BU of 3m6w by Molmil
Multi-site-specific 16S rRNA methyltransferase RsmF from Thermus thermophilus in space group P21212 in complex with S-Adenosyl-L-Methionine
Descriptor: CHLORIDE ION, S-ADENOSYLMETHIONINE, rRNA methylase
Authors:Demirci, H, Larsen, H.G.L, Hansen, T, Rasmussen, A, Cadambi, A, Gregory, S.T, Kirpekar, F, Jogl, G.
Deposit date:2010-03-16
Release date:2010-03-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Multi-site-specific 16S rRNA methyltransferase RsmF from Thermus thermophilus.
Rna, 16, 2010
2H3W
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BU of 2h3w by Molmil
Crystal structure of the S554A/M564G mutant of murine carnitine acetyltransferase in complex with hexanoylcarnitine and CoA
Descriptor: (R)-3-CARBOXY-2-(HEXANOYLOXY)-N,N,N-TRIMETHYLPROPAN-1-AMINIUM, COENZYME A, carnitine acetyltransferase
Authors:Hsiao, Y.S, Jogl, G, Tong, L.
Deposit date:2006-05-23
Release date:2006-08-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of murine carnitine acetyltransferase in ternary complexes with its substrates
J.Biol.Chem., 281, 2006
2OSV
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BU of 2osv by Molmil
Crystal Structure of ZnuA from E. coli
Descriptor: High-affinity zinc uptake system protein znuA, ZINC ION
Authors:Li, H, Jogl, G.
Deposit date:2007-02-06
Release date:2007-04-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of the Zinc-binding Transport Protein ZnuA from Escherichia coli Reveals an Unexpected Variation in Metal Coordination.
J.Mol.Biol., 368, 2007
2IF8
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BU of 2if8 by Molmil
Crystal structure of Inositol Phosphate Multikinase Ipk2 in complex with ADP and Mn2+ from S. cerevisiae
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, Inositol polyphosphate multikinase, ...
Authors:Holmes, W, Jogl, G.
Deposit date:2006-09-20
Release date:2006-10-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of inositol phosphate multikinase 2 and implications for substrate specificity.
J.Biol.Chem., 281, 2006
2H3U
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Crystal structure of murine carnitine acetyltransferase in complex with carnitine and CoA
Descriptor: CARNITINE, COENZYME A, carnitine acetyltransferase
Authors:Hsiao, Y.S, Jogl, G, Tong, L.
Deposit date:2006-05-23
Release date:2006-08-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of murine carnitine acetyltransferase in ternary complexes with its substrates
J.Biol.Chem., 281, 2006
2H3P
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Crystal structure of murine carnitine acetyltransferase in complex with carnitine and acetyl-CoA
Descriptor: ACETYL COENZYME *A, CARNITINE, COENZYME A, ...
Authors:Hsiao, Y.S, Jogl, G, Tong, L.
Deposit date:2006-05-22
Release date:2006-08-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of murine carnitine acetyltransferase in ternary complexes with its substrates
J.Biol.Chem., 281, 2006

221051

数据于2024-06-12公开中

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