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PDB: 264 results

3IEU
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BU of 3ieu by Molmil
Crystal Structure of ERA in Complex with GDP
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GTP-binding protein era, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Tu, C, Ji, X.
Deposit date:2009-07-23
Release date:2009-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of ERA in complex with the 3' end of 16S rRNA: implications for ribosome biogenesis
Proc.Natl.Acad.Sci.USA, 106, 2009
3IEV
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BU of 3iev by Molmil
Crystal Structure of ERA in Complex with MgGNP and the 3' End of 16S rRNA
Descriptor: 5'-R(P*AP*UP*CP*AP*CP*CP*UP*CP*CP*UP*UP*A)-3', GTP-binding protein era, MAGNESIUM ION, ...
Authors:Tu, C, Ji, X.
Deposit date:2009-07-23
Release date:2009-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of ERA in complex with the 3' end of 16S rRNA: implications for ribosome biogenesis
Proc.Natl.Acad.Sci.USA, 106, 2009
1AJ9
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BU of 1aj9 by Molmil
R-STATE HUMAN CARBONMONOXYHEMOGLOBIN ALPHA-A53S
Descriptor: CARBON MONOXIDE, HEMOGLOBIN (ALPHA CHAIN), HEMOGLOBIN (BETA CHAIN), ...
Authors:Vasquez, G.B, Ji, X, Fronticelli, C, Gilliland, G.L.
Deposit date:1997-05-16
Release date:1998-05-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Human carboxyhemoglobin at 2.2 A resolution: structure and solvent comparisons of R-state, R2-state and T-state hemoglobins.
Acta Crystallogr.,Sect.D, 54, 1998
4B3N
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BU of 4b3n by Molmil
Crystal structure of rhesus TRIM5alpha PRY/SPRY domain
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MALTOSE-BINDING PERIPLASMIC PROTEIN, TRIPARTITE MOTIF-CONTAINING PROTEIN 5, ...
Authors:Yang, H, Ji, X, Zhao, Q, Xiong, Y.
Deposit date:2012-07-25
Release date:2012-10-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural Insight Into HIV-1 Capsid Recognition by Rhesus Trim5Alpha
Proc.Natl.Acad.Sci.USA, 109, 2012
3DJ9
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BU of 3dj9 by Molmil
Crystal Structure of an isolated, unglycosylated antibody CH2 domain
Descriptor: Ig gamma-1 chain C region
Authors:Prabakaran, P, Vu, B.K, Gan, J, Dimitrov, D.S, Ji, X.
Deposit date:2008-06-22
Release date:2008-09-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of an isolated unglycosylated antibody C(H)2 domain.
Acta Crystallogr.,Sect.D, 64, 2008
3FTD
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BU of 3ftd by Molmil
Crystal structure of A. aeolicus KsgA at 1.44-Angstrom resolution
Descriptor: Dimethyladenosine transferase
Authors:Tu, C, Ji, X.
Deposit date:2009-01-12
Release date:2009-03-24
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Structural Basis for Binding of RNA and Cofactor by a KsgA Methyltransferase.
Structure, 17, 2009
3FTF
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BU of 3ftf by Molmil
Crystal structure of A. aeolicus KsgA in complex with RNA and SAH
Descriptor: 5'-R(P*AP*AP*CP*CP*GP*UP*AP*GP*GP*GP*GP*AP*AP*CP*CP*UP*GP*CP*GP*GP*UP*U)-3', Dimethyladenosine transferase, POTASSIUM ION, ...
Authors:Tu, C, Ji, X.
Deposit date:2009-01-12
Release date:2009-03-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Basis for Binding of RNA and Cofactor by a KsgA Methyltransferase.
Structure, 17, 2009
8SBU
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BU of 8sbu by Molmil
Crystal structure of MBP fusion with HPPK from Methanocaldococcus jannaschii
Descriptor: Maltose/maltodextrin-binding periplasmic protein,6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Shaw, G.X, Needle, D, Stair, N.R, Cherry, S, Tropea, J.E, Waugh, D.S, Ji, X.
Deposit date:2023-04-04
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of MBP fusion with HPPK from Methanocaldococcus jannaschii
To be published
8SD5
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BU of 8sd5 by Molmil
Crystal structure of HPPK from Methanocaldococcus jannaschii
Descriptor: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, SULFATE ION
Authors:Shaw, G.X, Needle, D, Stair, N.R, Cherry, S, Tropea, J.E, Waugh, D.S, Ji, X.
Deposit date:2023-04-06
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2.802 Å)
Cite:Crystal structure of HPPK from Methanocaldococcus jannaschii
To be published
8SSX
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BU of 8ssx by Molmil
Crystal structure of Bacillus anthracis dihydrofolate reductase at 1.65-A resolution
Descriptor: 1,2-ETHANEDIOL, Dihydrofolate reductase, SULFATE ION
Authors:Shaw, G.X, Li, Y, Wu, Y, Yan, H, Ji, X.
Deposit date:2023-05-09
Release date:2023-05-17
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of Bacillus anthracis dihydrofolate reductase at 1.65-A resolution
To be published
2NUG
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BU of 2nug by Molmil
Crystal structure of RNase III from Aquifex aeolicus complexed with ds-RNA at 1.7-Angstrom Resolution
Descriptor: 5'-R(P*AP*AP*GP*GP*UP*CP*AP*UP*UP*CP*G)-3', 5'-R(P*AP*GP*UP*GP*GP*CP*CP*UP*UP*GP*C)-3', MAGNESIUM ION, ...
Authors:Gan, J.H, Shaw, G, Tropea, J.E, Waugh, D.S, Court, D.L, Ji, X.
Deposit date:2006-11-09
Release date:2007-11-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A stepwise model for double-stranded RNA processing by ribonuclease III.
Mol.Microbiol., 67, 2007
8SL9
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BU of 8sl9 by Molmil
Crystal structure of Francisella tularensis HPPK-DHPS in complex with HPPK inhibitor HP-73
Descriptor: 1,2-ETHANEDIOL, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 5'-S-[(2R,4R)-1-{2-[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridine-6-carbonyl)amino]ethyl}-2-carboxypiperidin-4-yl]-5'-thioadenosine, ...
Authors:Shaw, G.X, Shi, G, Cherry, S, Needle, D, Tropea, J.E, Waugh, D.S, Ji, X.
Deposit date:2023-04-21
Release date:2024-05-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of Francisella tularensis HPPK-DHPS in complex with HPPK inhibitor HP-73
To be published
8SSW
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BU of 8ssw by Molmil
Crystal structure of DEAD-box RNA helicase DDX3X in complex with ADP at pre-unwound state
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DDX3X, ...
Authors:Song, H, Ji, X.
Deposit date:2023-05-09
Release date:2024-05-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of DEAD-box RNA helicase DDX3X in complex with ADP at pre-unwound state
To be published
8T0S
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BU of 8t0s by Molmil
Crystal structure of UBE2G2 adduct with phenethyl isothiocyanate (PEITC) at the Cys48 position
Descriptor: 1,2-ETHANEDIOL, E3 ubiquitin-protein ligase AMFR, Ubiquitin-conjugating enzyme E2 G2
Authors:Wang, C, Shaw, G.X, Shi, G, Ji, X.
Deposit date:2023-06-01
Release date:2024-06-05
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of UBE2G2 adduct with phenethyl isothiocyanate (PEITC) at the Cys48 position
To be published
8SO8
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BU of 8so8 by Molmil
Crystal structure of an N-terminally truncated variant of Escherichia coli RapA
Descriptor: CHLORIDE ION, RNA polymerase-associated protein RapA, SULFATE ION
Authors:Shaw, G.X, Kakar, S, Ji, X.
Deposit date:2023-04-28
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2.607 Å)
Cite:Crystal structure of an N-terminally truncated variant of Escherichia coli RapA
To be published
8SP4
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BU of 8sp4 by Molmil
Crystal structure of N-terminally truncated Escherichia coli RapA in complex with ATP-gamma-S
Descriptor: CHLORIDE ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, RNA polymerase-associated protein RapA
Authors:Shaw, G.X, Kakar, S, Ji, X.
Deposit date:2023-05-02
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Crystal structure of N-terminally truncated Escherichia coli RapA in complex with ATP-gamma-S
To be published
8SK1
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BU of 8sk1 by Molmil
Bacillus anthracis HPPK in complex with bisubstrate inhibitor HP-73
Descriptor: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase, 5'-S-[(2R,4R)-1-{2-[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridine-6-carbonyl)amino]ethyl}-2-carboxypiperidin-4-yl]-5'-thioadenosine
Authors:Shaw, G.X, Tropea, J.E, Shi, G, Waugh, D.S, Ji, X.
Deposit date:2023-04-18
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Bacillus anthracis HPPK in complex with bisubstrate inhibitor HP-73
To be published
8SIF
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BU of 8sif by Molmil
Crystal structure of Escherichia coli HPPK in complex with bisubstrate inhibitor HP-101
Descriptor: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 5'-S-{(2R,4R)-1-[3-(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)propyl]-2-carboxypiperidin-4-yl}-5'-thioadenosine
Authors:Shaw, G.X, Shi, G, Ji, X.
Deposit date:2023-04-16
Release date:2024-07-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The first bisubstrate inhibitor of HPPK exhibiting cell permeability
To be published
8SPG
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BU of 8spg by Molmil
Crystal structure of N-terminally truncated Escherichia coli RapA in complex with MgADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Shaw, G.X, Ji, X.
Deposit date:2023-05-03
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of N-terminally truncated Escherichia coli RapA in complex with MgADP
To be published
2NUF
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BU of 2nuf by Molmil
Crystal structure of RNase III from Aquifex aeolicus complexed with ds-RNA at 2.5-Angstrom Resolution
Descriptor: 28-MER, MAGNESIUM ION, Ribonuclease III
Authors:Gan, J.H, Shaw, G, Tropea, J.E, Waugh, D.S, Court, D.L, Ji, X.
Deposit date:2006-11-09
Release date:2007-11-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A stepwise model for double-stranded RNA processing by ribonuclease III.
Mol.Microbiol., 67, 2007
2NM2
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BU of 2nm2 by Molmil
Crystal structure of dihydroneopterin aldolase from S. aureus in complex with (1S,2R)-neopterin at 1.50 Angstrom resolution
Descriptor: Dihydroneopterin aldolase, L-NEOPTERIN
Authors:Blaszczyk, J, Ji, X, Yan, H.
Deposit date:2006-10-20
Release date:2007-09-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for the aldolase and epimerase activities of Staphylococcus aureus dihydroneopterin aldolase.
J.Mol.Biol., 368, 2007
8SU7
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BU of 8su7 by Molmil
Crystal structure of Bacillus anthracis dihydroneopterin aldolase
Descriptor: 1,2-ETHANEDIOL, 7,8-dihydroneopterin aldolase
Authors:Shaw, G.X, Li, Y, Yan, H, Ji, X.
Deposit date:2023-05-11
Release date:2023-05-24
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of Bacillus anthracis dihydroneopterin aldolase
To be published
8SV5
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BU of 8sv5 by Molmil
Crystal structure of Bacillus anthracis dihydroneopterin aldolase in complex with 6-hydroxymethyl-7,8-dihydropterin
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-6-HYDROXYMETHYL-7,8-DIHYDRO-3H-PTERIDIN-4-ONE, 7,8-dihydroneopterin aldolase
Authors:Shaw, G.X, Li, Y, Yan, H, Ji, X.
Deposit date:2023-05-15
Release date:2023-06-07
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of Bacillus anthracis dihydroneopterin aldolase in complex with 6-hydroxymethyl-7,8-dihydropterin
To be published
8SZE
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BU of 8sze by Molmil
Crystal structure of Yersinia pestis dihydrofolate reductase in complex with Trimethoprim
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Dihydrofolate reductase, ...
Authors:Shaw, G.X, Cherry, S, Tropea, J.E, Waugh, D.S, Ji, X.
Deposit date:2023-05-29
Release date:2023-06-07
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Yersinia pestis dihydrofolate reductase in complex with Trimethoprim
To be published
8SZD
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BU of 8szd by Molmil
Crystal structure of Yersinia pestis dihydrofolate reductase at 1.25-A resolution
Descriptor: CHLORIDE ION, Dihydrofolate reductase, MAGNESIUM ION, ...
Authors:Shaw, G.X, Cherry, S, Tropea, J.E, Waugh, D.S, Ji, X.
Deposit date:2023-05-29
Release date:2023-06-07
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structure of Yersinia pestis dihydrofolate reductase at 1.25-A resolution
To be published

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