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PDB: 84 件

5NH5
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Crystal structure of native xylose isomerase from Piromyces E2
分子名称: CALCIUM ION, FE (II) ION, GLYCEROL, ...
著者Rozeboom, H.J, Janssen, D.B.
登録日2017-03-21
公開日2017-11-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography.
Biochemistry, 56, 2017
5NHB
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Crystal structure of xylose isomerase from Piromyces E2 in complex with two Fe2+ ions
分子名称: FE (II) ION, SULFATE ION, Xylose isomerase
著者Rozeboom, H.J, Janssen, D.B.
登録日2017-03-21
公開日2017-11-01
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography.
Biochemistry, 56, 2017
5NHA
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Crystal structure of xylose isomerase from Piromyces sp. E2 in complex with two Mn2+ ions and sorbitol
分子名称: MANGANESE (II) ION, SULFATE ION, Xylose isomerase, ...
著者Rozeboom, H.J, Janssen, D.B.
登録日2017-03-21
公開日2017-11-01
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography.
Biochemistry, 56, 2017
4V2R
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BU of 4v2r by Molmil
Ironing out their differences: Dissecting the structural determinants of a phenylalanine aminomutase and ammonia lyase
分子名称: PHENYLALANINE AMINOMUTASE (L-BETA-PHENYLALANINE FORMING)
著者Heberling, M, Masman, M, Bartsch, S, Wybenga, G.G, Dijkstra, B.W, Marrink, S, Janssen, D.
登録日2014-10-14
公開日2014-12-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Ironing out their differences: dissecting the structural determinants of a phenylalanine aminomutase and ammonia lyase.
ACS Chem. Biol., 10, 2015
4R9K
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Structure of thermostable eightfold mutant of limonene epoxide hydrolase from Rhodococcus erythropolis
分子名称: (2R)-2-hydroxyhexanamide, GLYCEROL, Limonene-1,2-epoxide hydrolase
著者Floor, R.J, Wijma, H.J, Jekel, P.A, Terwisscha van Scheltinga, A.C, Dijkstra, B.W, Janssen, D.B.
登録日2014-09-05
公開日2014-09-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献X-ray crystallographic validation of structure predictions used in computational design for protein stabilization.
Proteins, 83, 2015
4R9L
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Structure of a thermostable elevenfold mutant of limonene epoxide hydrolase from Rhodococcus erythropolis, containing two stabilizing disulfide bonds
分子名称: (2R)-2-hydroxyhexanamide, Limonene-1,2-epoxide hydrolase
著者Floor, R.J, Wijma, H.J, Jekel, P.A, Terwisscha van Scheltinga, A.C, Dijkstra, B.W, Janssen, D.B.
登録日2014-09-05
公開日2014-09-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray crystallographic validation of structure predictions used in computational design for protein stabilization.
Proteins, 83, 2015
7AM6
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Crystal structure of Peptiligase mutant - L217H/M222P/A225N/F189W
分子名称: D(-)-TARTARIC ACID, GLYCEROL, LEU-PRO-GLU-GLY-SER-PRO-VAL-THR-ASP-LEU-ARG-TYR, ...
著者Rozeboom, H.J, Janssen, D.J.
登録日2020-10-08
公開日2021-02-17
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献From thiol-subtilisin to omniligase: Design and structure of a broadly applicable peptide ligase.
Comput Struct Biotechnol J, 19, 2021
5NH4
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Crystal structure of xylose isomerase from Piromyces E2 in complex with one Mg2+ ions and glycerol
分子名称: GLYCEROL, MAGNESIUM ION, SULFATE ION, ...
著者Rozeboom, H.J, Janssen, D.B.
登録日2017-03-21
公開日2017-11-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography.
Biochemistry, 56, 2017
8BIT
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BU of 8bit by Molmil
Crystal structure of acyl-CoA synthetase from Metallosphaera sedula in complex with Coenzyme A and acetyl-AMP
分子名称: 4-hydroxybutyrate--CoA ligase 1, COENZYME A, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] ethanoate
著者Capra, N, Thunnissen, A.M.W.H, Janssen, D.B.
登録日2022-11-02
公開日2023-11-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Adapting an acyl CoA ligase from Metallosphaera sedula for lactam formation by structure-guided protein engineering
Front Catal, 4, 2024
8BIQ
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Crystal structure of acyl-COA synthetase from Metallosphaera sedula in complex with acetyl-AMP
分子名称: 4-hydroxybutyrate--CoA ligase 1, ADENOSINE MONOPHOSPHATE, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] ethanoate
著者Capra, N, Thunnissen, A.M.W.H, Janssen, D.B.
登録日2022-11-02
公開日2023-11-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Adapting an acyl CoA ligase from Metallosphaera sedula for lactam formation by structure-guided protein engineering
Front Catal, 4, 2024
6Z1W
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Crystal structure of human steroid carrier protein SL (SCP-2L) mutant A100C
分子名称: OXTOXYNOL-10, Peroxisomal multifunctional enzyme type 2, SULFATE ION
著者Rozeboom, H.J, Janssen, D.B.
登録日2020-05-14
公開日2021-03-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Engineering Thermostability in Artificial Metalloenzymes to Increase Catalytic Activity
Acs Catalysis, 11, 2021
6Z1X
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Crystal structure of human steroid carrier protein SL (SCP-2L) mutant V83C
分子名称: OXTOXYNOL-10, Peroxisomal multifunctional enzyme type 2, SULFATE ION
著者Rozeboom, H.J, Janssen, D.B.
登録日2020-05-14
公開日2021-03-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Engineering Thermostability in Artificial Metalloenzymes to Increase Catalytic Activity
Acs Catalysis, 11, 2021
7AM3
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BU of 7am3 by Molmil
Crystal structure of Peptiligase mutant - M222P
分子名称: GLYCEROL, SULFATE ION, Subtilisin BPN'
著者Rozeboom, H.J, Janssen, D.J.
登録日2020-10-08
公開日2021-02-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献From thiol-subtilisin to omniligase: Design and structure of a broadly applicable peptide ligase.
Comput Struct Biotechnol J, 19, 2021
7AM8
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BU of 7am8 by Molmil
Crystal structure of Omniligase mutant W189F
分子名称: ACRYLIC ACID, CHLORIDE ION, HISTIDINE, ...
著者Rozeboom, H.J, Janssen, D.J.
登録日2020-10-08
公開日2021-02-17
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献From thiol-subtilisin to omniligase: Design and structure of a broadly applicable peptide ligase.
Comput Struct Biotechnol J, 19, 2021
7AM4
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BU of 7am4 by Molmil
Crystal structure of Peptiligase mutant - L217H/M222P
分子名称: GLYCEROL, SULFATE ION, Subtilisin BPN'
著者Rozeboom, H.J, Janssen, D.J.
登録日2020-10-08
公開日2021-02-17
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献From thiol-subtilisin to omniligase: Design and structure of a broadly applicable peptide ligase.
Comput Struct Biotechnol J, 19, 2021
7AM5
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BU of 7am5 by Molmil
Crystal structure of Peptiligase mutant - L217H/M222P/A225N
分子名称: SODIUM ION, Subtilisin BPN'
著者Rozeboom, H.J, Janssen, D.J.
登録日2020-10-08
公開日2021-02-17
最終更新日2021-03-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献From thiol-subtilisin to omniligase: Design and structure of a broadly applicable peptide ligase.
Comput Struct Biotechnol J, 19, 2021
7AM7
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BU of 7am7 by Molmil
Crystal structure of Peptiligase mutant - M222P/L217H/A225N/F189W/N218D
分子名称: Eglin C fragment, GLYCEROL, SULFATE ION, ...
著者Rozeboom, H.J, Janssen, D.J.
登録日2020-10-08
公開日2021-02-17
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献From thiol-subtilisin to omniligase: Design and structure of a broadly applicable peptide ligase.
Comput Struct Biotechnol J, 19, 2021
4BAA
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BU of 4baa by Molmil
Redesign of a Phenylalanine Aminomutase into a beta-Phenylalanine Ammonia Lyase
分子名称: PHENYLALANINE AMMONIA-LYASE
著者Bartsch, S, Wybenga, G.G, Jansen, M, Heberling, M.M, Wu, B, Dijkstra, B.W, Janssen, D.B.
登録日2012-09-12
公開日2013-01-16
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Redesign of a Phenylalanine Aminomutase Into a Phenylalanine Ammonia Lyase
To be Published
4BAB
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BU of 4bab by Molmil
Redesign of a Phenylalanine Aminomutase into a beta-Phenylalanine Ammonia Lyase
分子名称: PHENYLALANINE AMINOMUTASE
著者Bartsch, S, Wybenga, G.G, Jansen, M, Heberling, M.M, Wu, B, Dijkstra, B.W, Janssen, D.B.
登録日2012-09-12
公開日2013-01-16
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Redesign of a Phenylalanine Aminomutase Into a Phenylalanine Ammonia Lyase
To be Published
7B4J
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BU of 7b4j by Molmil
Thermostable omega transaminase PjTA-R6 variant W58M/F86L/R417L engineered for asymmetric synthesis of enantiopure bulky amines
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Aspartate aminotransferase family protein, SUCCINIC ACID
著者Capra, N, Rozeboom, H.J, Thunnissen, A.M.W.H, Janssen, D.B.
登録日2020-12-02
公開日2021-09-01
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Computational Redesign of an omega-Transaminase from Pseudomonas jessenii for Asymmetric Synthesis of Enantiopure Bulky Amines.
Acs Catalysis, 11, 2021
7B4I
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BU of 7b4i by Molmil
Thermostable omega transaminase PjTA-R6 variant W58G engineered for asymmetric synthesis of enantiopure bulky amines
分子名称: Aspartate aminotransferase family protein, PYRIDOXAL-5'-PHOSPHATE, SUCCINIC ACID
著者Capra, N, Rozeboom, H.J, Thunnissen, A.M.W.H, Janssen, D.B.
登録日2020-12-02
公開日2021-09-01
最終更新日2021-09-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Computational Redesign of an omega-Transaminase from Pseudomonas jessenii for Asymmetric Synthesis of Enantiopure Bulky Amines.
Acs Catalysis, 11, 2021
6TP2
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BU of 6tp2 by Molmil
Crystal structure of Bacillus paralicheniformis alpha-amylase in complex with beta-cyclodextrin
分子名称: Amylase, CALCIUM ION, Cycloheptakis-(1-4)-(alpha-D-glucopyranose), ...
著者Rozeboom, H.J, Janssen, D.B.
登録日2019-12-12
公開日2020-10-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Characterization of the starch surface binding site on Bacillus paralicheniformis alpha-amylase.
Int.J.Biol.Macromol., 165, 2020
6G4C
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BU of 6g4c by Molmil
Crystal structure of the omega transaminase from Pseudomonas jessenii in the apo form, crystallized from ammonium phosphate
分子名称: Aspartate aminotransferase family protein, PHOSPHATE ION
著者Rozeboom, H.J, Janssen, D.B.
登録日2018-03-27
公開日2019-04-10
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Biochemical properties of a Pseudomonas aminotransferase involved in caprolactam metabolism.
Febs J., 286, 2019
6G4F
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BU of 6g4f by Molmil
Crystal structure of the omega TRANSAMINASE FROM PSEUDOMONAS Jessenii in complex with PMP
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Aspartate aminotransferase family protein, GLYCEROL, ...
著者Rozeboom, H.J, Janssen, D.B.
登録日2018-03-27
公開日2019-04-10
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Biochemical properties of a Pseudomonas aminotransferase involved in caprolactam metabolism.
Febs J., 286, 2019
6G4D
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BU of 6g4d by Molmil
Crystal structure of the omega TRANSAMINASE FROM PSEUDOMONAS Jessenii in complex with PLP
分子名称: Aspartate aminotransferase family protein, GLYCEROL, PYRIDOXAL-5'-PHOSPHATE
著者Rozeboom, H.J, Janssen, D.B.
登録日2018-03-27
公開日2019-04-10
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Biochemical properties of a Pseudomonas aminotransferase involved in caprolactam metabolism.
Febs J., 286, 2019

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件を2024-09-11に公開中

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