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PDB: 23 件

3V3M
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Severe Acute Respiratory Syndrome Coronavirus (SARS-CoV) 3CL Protease in Complex with N-[(1R)-2-(tert-butylamino)-2-oxo-1-(pyridin-3-yl)ethyl]-N-(4-tert-butylphenyl)furan-2-carboxamide inhibitor.
分子名称: 3C-like proteinase, DIMETHYL SULFOXIDE, N-[(1R)-2-(tert-butylamino)-2-oxo-1-(pyridin-3-yl)ethyl]-N-(4-tert-butylphenyl)furan-2-carboxamide
著者Jacobs, J, Grum-Tokars, V, Zhou, Y, Turlington, M, Saldanha, S.A, Chase, P, Eggler, A, Dawson, E.S, Baez-Santos, Y.M, Tomar, S, Mielech, A.M, Baker, S.C, Lindsley, C.W, Hodder, P, Mesecar, A, Stauffer, S.R.
登録日2011-12-13
公開日2013-01-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Discovery, Synthesis, And Structure-Based Optimization of a Series of N-(tert-Butyl)-2-(N-arylamido)-2-(pyridin-3-yl) Acetamides (ML188) as Potent Noncovalent Small Molecule Inhibitors of the Severe Acute Respiratory Syndrome Coronavirus (SARS-CoV) 3CL Protease.
J.Med.Chem., 56, 2013
4UZW
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High-resolution NMR structures of the domains of Saccharomyces cerevisiae Tho1
分子名称: PROTEIN THO1
著者Jacobsen, J.O.B, Allen, M.D, Freund, S.M.V, Bycroft, M.
登録日2014-09-09
公開日2014-12-17
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献High-Resolution NMR Structures of the Domains of Saccharomyces Cerevisiae Tho1.
Acta Crystallogr.,Sect.F, 72, 2016
4UZX
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High-resolution NMR structures of the domains of Saccharomyces cerevisiae Tho1
分子名称: PROTEIN THO1
著者Jacobsen, J.O.B, Allen, M.D, Freund, S.M.V, Bycroft, M.
登録日2014-09-09
公開日2014-12-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献High-Resolution NMR Structures of the Domains of Saccharomyces Cerevisiae Tho1.
Acta Crystallogr.,Sect.F, 72, 2016
1H1J
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The SAP domain is a DNA-Binding Domain Capable of Binding S/MAR DNA
分子名称: THO1 PROTEIN
著者Jacobsen, J.O.B, Freund, S.M.V, Bycroft, M.
登録日2002-07-16
公開日2002-08-08
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The Sap Domain is a DNA-Binding Domain Capable of Binding S/Mar DNA
To be Published
2FDP
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Crystal structure of beta-secretase complexed with an amino-ethylene inhibitor
分子名称: Beta-secretase 1, N1-((2S,3S,5R)-3-AMINO-6-(4-FLUOROPHENYLAMINO)-5-METHYL-6-OXO-1-PHENYLHEXAN-2-YL)-N3,N3-DIPROPYLISOPHTHALAMIDE
著者Yang, W, Lu, W, Lu, Y, Zhong, M, Sun, J, Thomas, A.E, Wilkinson, J.M, Fucini, R.V, Lam, M, Randal, M, Shi, X.P, Jacobs, J.W, McDowell, R.S, Gordon, E.M, Ballinger, M.D.
登録日2005-12-14
公開日2006-01-24
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Aminoethylenes: a tetrahedral intermediate isostere yielding potent inhibitors of the aspartyl protease BACE-1.
J.Med.Chem., 49, 2006
3BM9
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Discovery of Benzisoxazoles as Potent Inhibitors of Chaperone Hsp90
分子名称: 4-bromo-6-(6-hydroxy-1,2-benzisoxazol-3-yl)benzene-1,3-diol, Heat shock protein HSP 90-alpha
著者Gopalsamy, A, Shi, M, Vogan, E.M, Golas, J, Jacob, J, Johnson, J, Lee, F, Nilakantan, R, Peterson, R, Svenson, K, Tam, M.S, Wen, Y, Chopra, R, Ellingboe, J, Arndt, K, Boschelli, F.
登録日2007-12-12
公開日2008-07-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Discovery of benzisoxazoles as potent inhibitors of chaperone heat shock protein 90.
J.Med.Chem., 51, 2008
3BMY
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Discovery of Benzisoxazoles as Potent Inhibitors of Chaperone Hsp90
分子名称: 4-chloro-6-{5-[(2-morpholin-4-ylethyl)amino]-1,2-benzisoxazol-3-yl}benzene-1,3-diol, Heat shock protein HSP 90-alpha
著者Gopalsamy, A, Shi, M, Vogan, E.M, Golas, J, Jacob, J, Johnson, J, Lee, F, Nilakantan, R, Peterson, R, Svenson, K, Tam, M.S, Wen, Y, Chopra, R, Ellingboe, J, Arndt, K, Boschelli, F.
登録日2007-12-13
公開日2008-07-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Discovery of benzisoxazoles as potent inhibitors of chaperone heat shock protein 90.
J.Med.Chem., 51, 2008
4WEB
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Structure of the core ectodomain of the hepatitis C virus envelope glycoprotein 2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, FORMAMIDE, Mouse Fab Heavy Chain, ...
著者Khan, A.G, Whidby, J, Miller, M.T, Scarborough, H, Zatorski, A.V, Cygan, A, Price, A.A, Yost, S.A, Bohannon, C.D, Jacob, J, Grakoui, A, Marcotrigiano, J.
登録日2014-09-09
公開日2014-12-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the core ectodomain of the hepatitis C virus envelope glycoprotein 2.
Nature, 509, 2014
3BEW
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10mer Crystal Structure of chicken MHC class I haplotype B21
分子名称: 10-mer from Tubulin beta-6 chain, Beta-2-microglobulin, Major histocompatibility complex class I glycoprotein haplotype B21
著者Koch, M, Camp, S, Collen, T, Avila, D, Salomonsen, J, Wallny, H.J, van Hateren, A, Hunt, L, Jacob, J.P, Johnston, F, Marston, D.A, Shaw, I, Dunbar, P.R, Cerundolo, V, Jones, E.Y, Kaufman, J.
登録日2007-11-20
公開日2008-01-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of an MHC class I molecule from b21 chickens illustrate promiscuous Peptide binding
Immunity, 27, 2007
2HLI
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Solution structure of Crotonaldehyde-Derived N2-[3-Oxo-1(S)-methyl-propyl]-dG DNA Adduct in the 5'-CpG-3' Sequence
分子名称: DNA dodecamer, DNA dodecamer with S-crotonaldehyde adduct
著者Cho, Y.-J, Wang, H, Kozekov, I.D, Kurtz, A.J, Jacob, J, Voehler, M, Smith, J, Harris, T.M, Rizzo, C.J, Stone, M.P.
登録日2006-07-07
公開日2006-09-19
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Orientation of the Crotonaldehyde-Derived N(2)-[3-Oxo-1(S)-methyl-propyl]-dG DNA Adduct Hinders Interstrand Cross-Link Formation in the 5'-CpG-3' Sequence
Chem.Res.Toxicol., 19, 2006
1RL1
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Solution structure of human Sgt1 CS domain
分子名称: Suppressor of G2 allele of SKP1 homolog
著者Lee, Y.-T, Jacob, J, Michowski, W, Nowotny, M, Kuznicki, J, Chazin, W.J.
登録日2003-11-24
公開日2004-05-04
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Human Sgt1 Binds HSP90 through the CHORD-Sgt1 Domain and Not the Tetratricopeptide Repeat Domain
J.Biol.Chem., 279, 2004
1HHW
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Solution structure of LNA1:RNA hybrid
分子名称: 5- D(*CP*TP*GP*AP*+TLNP*AP*TP*GP*C) -3, 5- R(*GP*CP*AP*UP*AP*UP*CP*AP*G) -3
著者Petersen, M, Bondensgaard, K, Wengel, J, Jacobsen, J.P.
登録日2000-12-29
公開日2002-05-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Locked Nucleic Acid (Lna) Recognition of RNA: NMR Solution Structures of Lna:RNA Hybrids
J.Am.Chem.Soc., 124, 2002
1HHX
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Solution structure of LNA3:RNA hybrid
分子名称: 5- D(*CP*+TP*GP*AP*+TP*AP*+TP*GP*C) -3, 5- R(*GP*CP*AP*UP*AP*UP*CP*AP*G) -3
著者Petersen, M, Bondensgaard, K, Wengel, J, Jacobsen, J.P.
登録日2000-12-29
公開日2002-05-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Locked Nucleic Acid (Lna) Recognition of RNA: NMR Solution Structures of Lna:RNA Hybrids
J.Am.Chem.Soc., 124, 2002
214D
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THE SOLUTION STRUCTURE OF A DNA DUPLEX CONTAINING A SINGLE 2'-O-METHYL-BETA-D-ARAT
分子名称: DNA (5'-D(*CP*GP*CP*AP*TP*AP*TP*AP*GP*CP*C)-3'), DNA (5'-D(*GP*GP*CP*TP*AP*(T41)P*AP*TP*GP*CP*G)-3')
著者Gotfredsen, C.H, Spielmann, H.P, Wengel, J, Jacobsen, J.P.
登録日1995-07-07
公開日1995-10-15
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of a DNA duplex containing a single 2'-O-methyl-beta-D-araT: combined use of NMR, restrained molecular dynamics, and full relaxation matrix refinement.
Bioconjug.Chem., 7, 1996
2KDY
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NMR structure of LP2086-B01
分子名称: Factor H binding protein variant B01_001
著者Mascioni, A, Bentley, B.E, Camarda, R, Dilts, D.A, Fink, P, Gusarova, V, Hoiseth, S, Jacob, J, Lin, S.L, Malakian, K, McNeil, L.K, Mininni, T, Moy, F, Murphy, E, Novikova, E, Sigethy, S, Wen, Y, Zlotnick, G.W, Tsao, D.H.H.
登録日2009-01-20
公開日2009-02-17
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural Basis for the Immunogenic Properties of the Meningococcal Vaccine Candidate LP2086.
J.Biol.Chem., 284, 2009
1D8V
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THE RESTRAINED AND MINIMIZED AVERAGE NMR STRUCTURE OF MAP30.
分子名称: ANTI-HIV AND ANTI-TUMOR PROTEIN MAP30
著者Wang, Y.-X, Neamati, N, Jacob, J, Palmer, I, Stahl, S.J.
登録日1999-10-26
公開日1999-11-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of anti-HIV-1 and anti-tumor protein MAP30: structural insights into its multiple functions.
Cell(Cambridge,Mass.), 99, 1999
4AUC
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Bovine chymosin in complex with Pepstatin A
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, CHYMOSIN, ...
著者Langholm Jensen, J, Navarro Poulsen, J.C, Jacobsen, J, van den Brink, J.M, Qvist, K.B, Larsen, S.
登録日2012-05-16
公開日2013-05-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The Structure of Bovine Chymosin in Complex with Pepstatin A
To be Published
108D
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THE SOLUTION STRUCTURE OF A DNA COMPLEX WITH THE FLUORESCENT BIS INTERCALATOR TOTO DETERMINED BY NMR SPECTROSCOPY
分子名称: 1,1-(4,4,8,8-TETRAMETHYL-4,8-DIAZAUNDECAMETHYLENE)-BIS-4-3-METHYL-2,3-DIHYDRO-(BENZO-1,3-THIAZOLE)-2-METHYLIDENE)-QUINOLINIUM, DNA (5'-D(*CP*GP*CP*TP*AP*GP*CP*G)-3')
著者Spielmann, H.P, Wemmer, D.E, Jacobsen, J.P.
登録日1995-01-31
公開日1995-06-03
最終更新日2024-03-13
実験手法SOLUTION NMR
主引用文献Solution structure of a DNA complex with the fluorescent bis-intercalator TOTO determined by NMR spectroscopy.
Biochemistry, 34, 1995
4M1U
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The crystal structure of Stx2 and a disaccharide ligand
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-4)-methyl beta-D-galactopyranoside, 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, Shiga toxin 2 A-subunit, ...
著者Yin, J, James, M.N.G, Jacobson, J.M, Kitov, P.I, Bundle, D.R, Mulvey, G, Armstrong, G.
登録日2013-08-04
公開日2013-11-20
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献The crystal structure of shiga toxin type 2 with bound disaccharide guides the design of a heterobifunctional toxin inhibitor.
J.Biol.Chem., 289, 2014
1OCI
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[3.2.0]bcANA:DNA
分子名称: 5'-D(*CP*TP*GP*A TLBP*AP*TP*GP*CP)-3', 5'-D(*GP*CP*AP*TP*AP*TP*CP*AP*GP)-3'
著者Tommerholt, H.V, Christensen, N.K, Nielsen, P, Wengel, J, Stein, P.C, Jacobsen, J.P, Petersen, M.
登録日2003-02-07
公開日2003-07-14
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR Solution Structure of a DsDNA Containing a Bicyclic D-Arabino-Configured Nucleotide Fixed in an O4'-Endo Sugar Conformation
Org.Biomol.Chem., 1, 2003
1H0Q
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NMR solution structure of a fully modified locked nucleic acid (LNA) hybridized to RNA
分子名称: 5-D(*(LKC)P*(TLN)P*(LCG)P*(LCA)P*(TLN)P*(LCA)P* (TLN)P*(LCG)P*(LCC))-3, 5-R(*GP*CP*AP*UP*AP*UP*CP*AP*G)-3
著者Rasmussen, J, Petersen, M, Nielsen, K.E, Kumar, R, Wengel, J, Jacobsen, J.P.
登録日2002-06-27
公開日2003-07-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR Studies of Fully Modified Locked Nucleic Acid (Lna) Hybrids: Solution Structure of an Lna:RNA Hybrid and Characterization of an Lna:RNA Hybrid
Bioconjug.Chem., 15, 2004
1HG9
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Solution structure of DNA:RNA hybrid
分子名称: 5- D(*CP*TP*GP*AP*TP*AP*TP*GP*C) -3, 5- R(*GP*CP*AP*UP*AP*UP*CP*AP*G) -3
著者Petersen, M, Bondensgaard, K, Wengel, J, Jacobsen, J.P.
登録日2000-12-13
公開日2002-01-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural studies of LNA:RNA duplexes by NMR: conformations and implications for RNase H activity.
Chemistry, 6, 2000
1GV6
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Solution structure of alfa-L-LNA:DNA duplex
分子名称: 5- D(*CP*(ATL)P*GP*CP*(ATL)P*(ATL)P*CP*(ATL)P* GP*C) -3, 5- D(*GP*CP*AP*GP*AP*AP*GP*CP*AP*G) -3
著者Nielsen, K.M.E, Petersen, M, Haakansson, A.E, Wengel, J, Jacobsen, J.P.
登録日2002-02-06
公開日2002-07-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Alfa-L-Lna (Alfa-L-Ribo Configured Locked Nucleic Acid) Recognition of DNA: An NMR Spectroscopic Study
Chemistry, 8, 2002

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