Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 2886 件

7Z5E
DownloadVisualize
BU of 7z5e by Molmil
VP2-only capsid of MVM D263A mutant
分子名称: Capsid protein VP1
著者Luque, D, Ortega-Esteban, A, Valbuena, A, Vilas, J.L, Rodriguez-Huete, A, Mateu, M.G, Caston, J.R.
登録日2022-03-09
公開日2023-03-08
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.32 Å)
主引用文献Equilibrium Dynamics of a Biomolecular Complex Analyzed at Single-amino Acid Resolution by Cryo-electron Microscopy.
J.Mol.Biol., 435, 2023
7Z5F
DownloadVisualize
BU of 7z5f by Molmil
VP2-only capsid of MVM D263A mutant
分子名称: Capsid protein VP1
著者Luque, D, Ortega-Esteban, A, Valbuena, A, Vilas, J.L, Rodriguez-Huete, A, Mateu, M.G, Caston, J.R.
登録日2022-03-09
公開日2023-03-08
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Equilibrium Dynamics of a Biomolecular Complex Analyzed at Single-amino Acid Resolution by Cryo-electron Microscopy.
J.Mol.Biol., 435, 2023
7Z5D
DownloadVisualize
BU of 7z5d by Molmil
VP2-only capsid of wt MVM prototype strain p
分子名称: Capsid protein VP1
著者Luque, D, Ortega-Esteban, A, Valbuena, A, Vilas, J.L, Rodriguez-Huete, A, Mateu, M.G, Caston, J.R.
登録日2022-03-09
公開日2023-03-08
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献Equilibrium Dynamics of a Biomolecular Complex Analyzed at Single-amino Acid Resolution by Cryo-electron Microscopy.
J.Mol.Biol., 435, 2023
7Z5R
DownloadVisualize
BU of 7z5r by Molmil
Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH012035
分子名称: (7~{R})-~{N}-(4,5,6,7-tetrahydro-1,2-benzoxazol-3-yl)bicyclo[4.2.0]octa-1,3,5-triene-7-carboxamide, N-glycosylase/DNA lyase, NICKEL (II) ION
著者Davies, J.R, Scaletti, E, Stenmark, P.
登録日2022-03-09
公開日2023-03-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH012035
To Be Published
8ORR
DownloadVisualize
BU of 8orr by Molmil
Outer membrane protein assembly factor BamB from Klebsiella pneumoniae
分子名称: CADMIUM ION, Outer membrane protein assembly factor BamB
著者Song, H, Bolla, J.R.
登録日2023-04-17
公開日2024-04-24
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Outer membrane protein assembly factor BamB from Klebsiella pneumoniae
To Be Published
8A4F
DownloadVisualize
BU of 8a4f by Molmil
Human Interleukin-4 mutant - C3T-IL4
分子名称: Interleukin-4
著者Vaz, D.C, Rodrigues, J.R, Mueller, T.D, Sebald, W, Redfield, C, Brito, R.M.M.
登録日2022-06-11
公開日2023-10-18
最終更新日2024-01-17
実験手法SOLUTION NMR
主引用文献Lessons on protein structure from interleukin-4: All disulfides are not created equal.
Proteins, 92, 2024
6S5Z
DownloadVisualize
BU of 6s5z by Molmil
Structure of Rib R28N from Streptococcus pyogenes
分子名称: SODIUM ION, Surface protein R28
著者Whelan, F, Griffiths, S.C, Whittingham, J.L, Bateman, A, Potts, J.R.
登録日2019-07-02
公開日2019-12-11
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Defining the remarkable structural malleability of a bacterial surface protein Rib domain implicated in infection.
Proc.Natl.Acad.Sci.USA, 116, 2019
6S5V
DownloadVisualize
BU of 6s5v by Molmil
Crystal structure of the Cap-Midlink region of the H5N1 Influenza A virus polymerase in complex with a Cap-domain binding analogue
分子名称: (1~{S},2~{S},3~{S},6~{R})-2-[[2-[5,7-bis(fluoranyl)-1~{H}-indol-3-yl]-5-fluoranyl-pyrimidin-4-yl]amino]-3,6-dimethyl-cyclohexane-1-carboxylic acid, GLYCEROL, POTASSIUM ION, ...
著者Keown, J.R, Fodor, E, Grimes, J.M.
登録日2019-07-02
公開日2019-11-06
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Design, Synthesis, and Biological Evaluation of Novel Indoles Targeting the Influenza PB2 Cap Binding Region.
J.Med.Chem., 62, 2019
6RR7
DownloadVisualize
BU of 6rr7 by Molmil
Influenza A virus (A/NT/60/1968) polymerase Heterotrimer bound to 3'5' vRNA promoter and capped RNA primer
分子名称: Polymerase acidic protein, Polymerase basic protein 2, RNA (5'-D(*(M7G))-R(P*AP*AP*UP*CP*U)-3'), ...
著者Carrique, L, Keown, J.R, Fan, H, Fodor, E, Grimes, J.M.
登録日2019-05-17
公開日2019-09-04
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献Structures of influenza A virus RNA polymerase offer insight into viral genome replication.
Nature, 573, 2019
8QCU
DownloadVisualize
BU of 8qcu by Molmil
Lysozyme covalently bound to fac-[Re(CO)3-imidazole] complex, incubated for 38 weeks.
分子名称: BROMIDE ION, CHLORIDE ION, IMIDAZOLE, ...
著者Jacobs, F.J.F, Brink, A, Helliwell, J.R.
登録日2023-08-28
公開日2024-05-01
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Time-series analysis of rhenium(I) organometallic covalent binding to a model protein for drug development.
Iucrj, 11, 2024
4K2F
DownloadVisualize
BU of 4k2f by Molmil
Structure of Pseudomonas aeruginosa PvdQ bound to BRD-A08522488
分子名称: (2S)-(4-chlorophenyl)(6-chloropyridin-2-yl)ethanenitrile, 1,2-ETHANEDIOL, Acyl-homoserine lactone acylase PvdQ
著者Drake, E.J, Wurst, J.M, Theriault, J.R, Munoz, B, Gulick, A.M.
登録日2013-04-09
公開日2014-06-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Identification of Inhibitors of PvdQ, an Enzyme Involved in the Synthesis of the Siderophore Pyoverdine.
Acs Chem.Biol., 9, 2014
4K2G
DownloadVisualize
BU of 4k2g by Molmil
Structure of Pseudomonas aeruginosa PvdQ bound to BRD-A33442372
分子名称: (2S)-(4-fluorophenyl)[6-(trifluoromethyl)pyridin-2-yl]ethanenitrile, 1,2-ETHANEDIOL, Acyl-homoserine lactone acylase PvdQ
著者Drake, E.J, Wurst, J.M, Theriault, J.R, Munoz, B, Gulick, A.M.
登録日2013-04-09
公開日2014-06-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Identification of Inhibitors of PvdQ, an Enzyme Involved in the Synthesis of the Siderophore Pyoverdine.
Acs Chem.Biol., 9, 2014
8SA2
DownloadVisualize
BU of 8sa2 by Molmil
Adenosylcobalamin-bound riboswitch dimer, form 1
分子名称: Adenosylcobalamin, adenosylcobalamin riboswitch form 1
著者Ding, J, Deme, J.C, Stagno, J.R, Yu, P, Lea, S.M, Wang, Y.X.
登録日2023-03-31
公開日2023-07-26
最終更新日2023-10-25
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Capturing heterogeneous conformers of cobalamin riboswitch by cryo-EM.
Nucleic Acids Res., 51, 2023
8SA4
DownloadVisualize
BU of 8sa4 by Molmil
Adenosylcobalamin-bound riboswitch dimer, form 3
分子名称: Adenosylcobalamin, adenosylcobalamin riboswitch form 3
著者Ding, J, Deme, J.C, Stagno, J.R, Yu, P, Lea, S.M, Wang, Y.X.
登録日2023-03-31
公開日2023-07-26
最終更新日2023-10-25
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Capturing heterogeneous conformers of cobalamin riboswitch by cryo-EM.
Nucleic Acids Res., 51, 2023
8S9M
DownloadVisualize
BU of 8s9m by Molmil
DNA cytosine-N4 methyltransferase (residues 79-324) from the Bdelloid rotifer Adineta vaga
分子名称: 1,2-ETHANEDIOL, DNA cytosine-N4 methyltransferase, SINEFUNGIN
著者Zhou, J, Horton, J.R, Cheng, X.
登録日2023-03-29
公開日2023-08-02
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Biochemical and structural characterization of the first-discovered metazoan DNA cytosine-N4 methyltransferase from the bdelloid rotifer Adineta vaga.
J.Biol.Chem., 299, 2023
8SA3
DownloadVisualize
BU of 8sa3 by Molmil
Adenosylcobalamin-bound riboswitch dimer, form 2
分子名称: Adenosylcobalamin, adenosylcobalamin riboswitch form 2
著者Ding, J, Deme, J.C, Stagno, J.R, Yu, P, Lea, S.M, Wang, Y.X.
登録日2023-03-31
公開日2023-07-26
最終更新日2023-10-25
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Capturing heterogeneous conformers of cobalamin riboswitch by cryo-EM.
Nucleic Acids Res., 51, 2023
8S9N
DownloadVisualize
BU of 8s9n by Molmil
DNA cytosine-N4 methyltransferase (residues 61-324) from the Bdelloid rotifer Adineta vaga - C2 crystal form
分子名称: 1,2-ETHANEDIOL, DNA cytosine-N4 methyltransferase, SINEFUNGIN
著者Zhou, J, Horton, J.R, Cheng, X.
登録日2023-03-29
公開日2023-08-02
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Biochemical and structural characterization of the first-discovered metazoan DNA cytosine-N4 methyltransferase from the bdelloid rotifer Adineta vaga.
J.Biol.Chem., 299, 2023
8S9O
DownloadVisualize
BU of 8s9o by Molmil
DNA cytosine-N4 methyltransferase (residues 61-324) from the Bdelloid rotifer Adineta vaga - P1 crystal form
分子名称: 1,2-ETHANEDIOL, DNA cytosine-N4 methyltransferase, SINEFUNGIN
著者Zhou, J, Horton, J.R, Cheng, X.
登録日2023-03-29
公開日2023-08-02
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Biochemical and structural characterization of the first-discovered metazoan DNA cytosine-N4 methyltransferase from the bdelloid rotifer Adineta vaga.
J.Biol.Chem., 299, 2023
8SA6
DownloadVisualize
BU of 8sa6 by Molmil
apo form of adenosylcobalamin riboswitch dimer
分子名称: apo form of adenosylcobalamin riboswitch dimer
著者Ding, J, Deme, J.C, Stagno, J.R, Yu, P, Lea, S.M, Wang, Y.X.
登録日2023-03-31
公開日2023-07-26
最終更新日2023-10-25
実験手法ELECTRON MICROSCOPY (5.3 Å)
主引用文献Capturing heterogeneous conformers of cobalamin riboswitch by cryo-EM.
Nucleic Acids Res., 51, 2023
8SA5
DownloadVisualize
BU of 8sa5 by Molmil
Adenosylcobalamin-bound riboswitch dimer, form 4
分子名称: Adenosylcobalamin, adenosylcobalamin riboswitch form 4
著者Ding, J, Deme, J.C, Stagno, J.R, Yu, P, Lea, S.M, Wang, Y.X.
登録日2023-03-31
公開日2023-07-26
最終更新日2023-10-25
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Capturing heterogeneous conformers of cobalamin riboswitch by cryo-EM.
Nucleic Acids Res., 51, 2023
5C0S
DownloadVisualize
BU of 5c0s by Molmil
Crystal structure of a generation 4 influenza hemagglutinin stabilized stem in complex with the broadly neutralizing antibody CR6261
分子名称: CR6261 antibody heavy chain, CR6261 antibody light chain, Hemagglutinin, ...
著者Boyington, J.C, Kwong, P.D, Nabel, G.J, Mascola, J.R.
登録日2015-06-12
公開日2015-09-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (4.3 Å)
主引用文献Hemagglutinin-stem nanoparticles generate heterosubtypic influenza protection.
Nat. Med., 21, 2015
3NTG
DownloadVisualize
BU of 3ntg by Molmil
Crystal structure of COX-2 with selective compound 23d-(R)
分子名称: (2R)-6,8-dichloro-7-(2-methylpropoxy)-2-(trifluoromethyl)-2H-chromene-3-carboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wang, J.L, Limburg, D, Graneto, M.J, Carter, J.C, Talley, J.J, Kiefer, J.R.
登録日2010-07-04
公開日2010-10-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献The novel benzopyran class of selective cyclooxygenase-2 inhibitors. Part 2: The second clinical candidate having a shorter and favorable human half-life.
Bioorg.Med.Chem.Lett., 20, 2010
8BNQ
DownloadVisualize
BU of 8bnq by Molmil
Crystal structure of the FnIII-tandem A84-A86 from the A-band of titin
分子名称: 1,2-ETHANEDIOL, Titin
著者Zacharchenko, T, Fleming, J.R, Mayans, O.
登録日2022-11-14
公開日2023-04-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular insights into titin's A-band.
J.Muscle Res.Cell.Motil., 44, 2023
8BCK
DownloadVisualize
BU of 8bck by Molmil
Recombinant Tipula oleracea Nudivirus polyhedrin
分子名称: CALCIUM ION, MOBP
著者Keown, J.R, Grimes, J.M.
登録日2022-10-16
公開日2023-07-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Atomic structure of a nudivirus occlusion body protein determined from a 70-year-old crystal sample.
Nat Commun, 14, 2023
8BC5
DownloadVisualize
BU of 8bc5 by Molmil
Recombinant Tipula oleracea Nudivirus Polyhedrin - Selenomethionine
分子名称: CALCIUM ION, MOBP
著者Keown, J.R, Grimes, J.M.
登録日2022-10-15
公開日2023-07-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Atomic structure of a nudivirus occlusion body protein determined from a 70-year-old crystal sample.
Nat Commun, 14, 2023

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon