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PDB: 3272 件

3TXH
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HEWL co-crystallization with carboplatin in DMSO media with glycerol as the cryoprotectant
分子名称: CHLORIDE ION, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Tanley, S.W.M, Schreurs, A.M.M, Helliwell, J.R, Kroon-Batenburg, L.M.J.
登録日2011-09-23
公開日2013-01-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Experience with exchange and archiving of raw data: comparison of data from two diffractometers and four software packages on a series of lysozyme crystals.
J.Appl.Crystallogr., 46, 2013
1VKG
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BU of 1vkg by Molmil
Crystal Structure of Human HDAC8 complexed with CRA-19156
分子名称: 5-(4-METHYL-BENZOYLAMINO)-BIPHENYL-3,4'-DICARBOXYLIC ACID 3-DIMETHYLAMIDE-4'-HYDROXYAMIDE, Histone deacetylase 8, SODIUM ION, ...
著者Somoza, J.R, Skene, R.J, Katz, B.A, Mol, C, Ho, J.D, Jennings, A.J, Luong, C, Arvai, A, Buggy, J.J, Chi, E, Tang, J, Sang, B.-C, Verner, E, Wynands, R, Leahy, E.M, Dougan, D.R, Snell, G, Navre, M, Knuth, M.W, Swanson, R.V, McRee, D.E, Tari, L.W.
登録日2004-05-13
公開日2004-07-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Snapshots of Human HDAC8 Provide Insights into the Class I Histone Deacetylases
Structure, 12, 2004
3TXI
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BU of 3txi by Molmil
HEWL co-crystallization with carboplatin in DMSO media with paratone as the cryoprotectant
分子名称: CHLORIDE ION, DIMETHYL SULFOXIDE, Lysozyme C, ...
著者Tanley, S.W.M, Schreurs, A.M.M, Helliwell, J.R, Kroon-Batenburg, L.M.J.
登録日2011-09-23
公開日2013-01-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Experience with exchange and archiving of raw data: comparison of data from two diffractometers and four software packages on a series of lysozyme crystals.
J.Appl.Crystallogr., 46, 2013
1VRX
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Endocellulase e1 from acidothermus cellulolyticus mutant y245g
分子名称: ENDOCELLULASE E1 FROM A. CELLULOLYTICUS
著者Baker, J.O, McCarley, J.R, Lovett, R, Yu, C.H, Adney, W.S, Rignall, T.R, Vinzant, T.B, Decker, S.R, Sakon, J, Himmel, M.E.
登録日2005-06-30
公開日2005-07-05
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Catalytically enhanced endocellulase Cel5A from Acidothermus cellulolyticus.
Appl.Biochem.Biotechnol., 121-124, 2005
3UA5
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Crystal Structure of P450 2B6 (Y226H/K262R) in complex with two molecules of Amlodipine
分子名称: Amlodipine, Cytochrome P450 2B6, PROTOPORPHYRIN IX CONTAINING FE
著者Shah, M.B, Stout, C.D, Halpert, J.R.
登録日2011-10-21
公開日2012-09-12
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Conformational Adaptation of Human Cytochrome P450 2B6 and Rabbit Cytochrome P450 2B4 Revealed upon Binding Multiple Amlodipine Molecules.
Biochemistry, 51, 2012
3TVV
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Structure of the tandem PH domains of Rtt106 (residues 68-315)
分子名称: Histone chaperone RTT106
著者Su, D, Thompson, J.R, Mer, G.
登録日2011-09-20
公開日2012-02-01
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.589 Å)
主引用文献Structural basis for recognition of H3K56-acetylated histone H3-H4 by the chaperone Rtt106.
Nature, 483, 2012
4OVM
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Crystal structure of SgcJ protein from Streptomyces carzinostaticus
分子名称: uncharacterized protein SgcJ
著者Chang, C, Bigelow, L, Clancy, S, Bingman, C.A, Yennamalli, R, Lohman, J.R, Ma, M, Shen, B, Phillips Jr, G.N, Babnigg, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2013-11-20
公開日2013-12-25
最終更新日2023-03-22
実験手法X-RAY DIFFRACTION (2.719 Å)
主引用文献Crystal structure of SgcJ, an NTF2-like superfamily protein involved in biosynthesis of the nine-membered enediyne antitumor antibiotic C-1027.
J.Antibiot., 2016
4OC8
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DNA modification-dependent restriction endonuclease AspBHI
分子名称: PHOSPHATE ION, restriction endonuclease AspBHI
著者Horton, J.R.
登録日2014-01-08
公開日2014-03-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.884 Å)
主引用文献Structure and mutagenesis of the DNA modification-dependent restriction endonuclease AspBHI.
Sci Rep, 4, 2014
4OD1
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Crystal structure of human Fab CAP256-VRC26.03, a potent V1V2-directed HIV-1 neutralizing antibody
分子名称: CAP256-VRC26.03 heavy chain, CAP256-VRC26.03 light chain
著者Gorman, J, Doria-Rose, N.A, Schramm, C.A, Moore, P.L, Mascola, J.R, Shapiro, L, Morris, L, Kwong, P.D.
登録日2014-01-09
公開日2014-02-26
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Developmental pathway for potent V1V2-directed HIV-neutralizing antibodies.
Nature, 509, 2014
6A2W
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Crystal structure of fucoxanthin chlorophyll a/c complex from Phaeodactylum tricornutum
分子名称: (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol, (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
著者Wang, W, Yu, L.J, Kuang, T.Y, Shen, J.R.
登録日2018-06-13
公開日2019-02-06
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for blue-green light harvesting and energy dissipation in diatoms.
Science, 363, 2019
4OWB
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BU of 4owb by Molmil
Cisplatin binding to HEWL under sodium bromide crystallisation conditions
分子名称: 2-methylprop-1-ene, ACETATE ION, BROMIDE ION, ...
著者Tanley, S.W.M, Helliwell, J.R.
登録日2014-01-31
公開日2014-09-24
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Chemical conversion of cisplatin and carboplatin with histidine in a model protein crystallized under sodium iodide conditions.
Acta Crystallogr.,Sect.F, 70, 2014
4OWH
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PtBr6 binding to HEWL
分子名称: ACETATE ION, BROMIDE ION, CHLORIDE ION, ...
著者Tanley, S.W.M, Starkey, V.L, Lamplough, L, Kaenket, S, Helliwell, J.R.
登録日2014-02-02
公開日2014-09-24
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.484 Å)
主引用文献The binding of platinum hexahalides (Cl, Br and I) to hen egg-white lysozyme and the chemical transformation of the PtI6 octahedral complex to a PtI3 moiety bound to His15.
Acta Crystallogr.,Sect.F, 70, 2014
4OXM
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BU of 4oxm by Molmil
CRYSTAL STRUCTURE OF Central Coiled-Coil from Influenza Hemagglutinin HA2 without Heptad Repeat Stutter
分子名称: HA2-Del
著者Malashkevich, V.N, Higgins, C.D, Lai, J.R, Almo, S.C.
登録日2014-02-05
公開日2014-04-30
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献CRYSTAL STRUCTURE OF Central Coiled-Coil from InfluenzaHemagglutinin HA2 without Heptad Repeat Stutter
to be published
4OCR
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BU of 4ocr by Molmil
Crystal structure of human Fab CAP256-VRC26.01, a potent V1V2-directed HIV-1 neutralizing antibody
分子名称: CAP256-VRC26.01 heavy chain, CAP256-VRC26.01 light chain
著者Gorman, J, Doria-Rose, N.A, Schramm, C.A, Moore, P.L, Mascola, J.R, Shapiro, L, Morris, L, Kwong, P.D.
登録日2014-01-09
公開日2014-02-26
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.895 Å)
主引用文献Developmental pathway for potent V1V2-directed HIV-neutralizing antibodies.
Nature, 509, 2014
4P67
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BU of 4p67 by Molmil
CRYSTAL STRUCTURE OF Central Coiled-Coil from Influenza Hemagglutinin HA2 without Heptad Repeat Stutter, spacegroup P3(1)
分子名称: Hemagglutinin
著者Malashkevich, V.N, Higgins, C.D, Lai, J.R, Almo, S.C.
登録日2014-03-22
公開日2014-05-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献CRYSTAL STRUCTURE OF Central Coiled-Coil from InfluenzaHemagglutinin HA2 without Heptad Repeat Stutter, spacegroup P3(1)
to be published
4PBA
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BU of 4pba by Molmil
The 5-Hydroxymethylcytosine-Specific Restriction Enzyme AbaSI in a Complex with Substrate-like DNA
分子名称: DNA (32-MER), Uncharacterized protein AbaSI
著者Horton, J.R, Cheng, X.
登録日2014-04-11
公開日2014-06-25
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.301 Å)
主引用文献Structure of 5-hydroxymethylcytosine-specific restriction enzyme, AbaSI, in complex with DNA.
Nucleic Acids Res., 42, 2014
4PLV
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BU of 4plv by Molmil
Crystal structure of ancestral apicomplexan malate dehydrogenase with lactate.
分子名称: (2S)-2-HYDROXYPROPANOIC ACID, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, malate dehydrogenase
著者Boucher, J.I, Jacobowitz, J.R, Beckett, B.C, Classen, S, Theobald, D.L.
登録日2014-05-19
公開日2014-07-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献An atomic-resolution view of neofunctionalization in the evolution of apicomplexan lactate dehydrogenases.
Elife, 3, 2014
5ZZN
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BU of 5zzn by Molmil
Crystal structure of photosystem II from an SQDG-deficient mutant of Thermosynechococcus elongatus
分子名称: (3R)-beta,beta-caroten-3-ol, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Nakajima, Y, Umena, Y, Nagao, R, Endo, K, Kobayashi, K, Akita, F, Suga, M, Wada, H, Noguchi, T, Shen, J.R.
登録日2018-06-03
公開日2018-08-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Thylakoid membrane lipid sulfoquinovosyl-diacylglycerol (SQDG) is required for full functioning of photosystem II inThermosynechococcus elongatus.
J. Biol. Chem., 293, 2018
4PWY
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BU of 4pwy by Molmil
Crystal structure of a Calmodulin-lysine N-methyltransferase fragment
分子名称: Calmodulin-lysine N-methyltransferase, GLYCEROL, MALONATE ION, ...
著者Tempel, W, Hong, B.S, Walker, J.R, Li, Y, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Structural Genomics Consortium (SGC)
登録日2014-03-21
公開日2014-04-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a Calmodulin-lysine N-methyltransferase fragment
TO BE PUBLISHED
4PXW
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BU of 4pxw by Molmil
Crystal structure of human DCAF1 WD40 repeats (Q1250L)
分子名称: Protein VPRBP, UNKNOWN ATOM OR ION
著者Xu, C, Tempel, W, He, H, Li, Y, Walker, J.R, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2014-03-25
公開日2014-04-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Crystal structure of human DCAF1 WD40 repeats (Q1250L)
TO BE PUBLISHED
4QHF
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Crystal structure of Methanocaldococcus jannaschii monomeric selecase
分子名称: GLYCEROL, NICKEL (II) ION, Uncharacterized protein MJ1213
著者Lopez-pelegrin, M, Cerda-costa, N, Cintas-pedrola, A, Herranz-trillo, F, Bernado, P, Peinado, J.R, Arolas, J.L, Gomis-ruth, F.X.
登録日2014-05-28
公開日2014-07-16
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Multiple stable conformations account for reversible concentration-dependent oligomerization and autoinhibition of a metamorphic metallopeptidase
Angew.Chem.Int.Ed.Engl., 53, 2014
4Q85
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YcaO with Non-hydrolyzable ATP (AMPCPP) Bound
分子名称: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MAGNESIUM ION, Ribosomal protein S12 methylthiotransferase accessory factor YcaO
著者Chekan, J.R, Nair, S.K.
登録日2014-04-25
公開日2014-08-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.29 Å)
主引用文献Discovery of a new ATP-binding motif involved in peptidic azoline biosynthesis.
Nat.Chem.Biol., 10, 2014
4PZ5
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BU of 4pz5 by Molmil
Crystal structure of the second and third fibronectin F1 modules in complex with a fragment of BBK32 from Borrelia burgdorferi
分子名称: Fibronectin, Fibronectin-binding protein BBK32
著者Harris, G, Potts, J.R.
登録日2014-03-28
公開日2014-07-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Borrelia burgdorferi Protein BBK32 Binds to Soluble Fibronectin via the N-terminal 70-kDa Region, Causing Fibronectin to Undergo Conformational Extension.
J.Biol.Chem., 289, 2014
4Q2W
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BU of 4q2w by Molmil
Crystal Structure of pneumococcal peptidoglycan hydrolase LytB
分子名称: GLYCEROL, Putative endo-beta-N-acetylglucosaminidase
著者Bai, X.H, Chen, H.J, Jiang, Y.L, Wen, Z, Cheng, W, Li, Q, Zhang, J.R, Chen, Y, Zhou, C.Z.
登録日2014-04-10
公開日2014-07-16
最終更新日2019-12-18
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure of pneumococcal peptidoglycan hydrolase LytB reveals insights into the bacterial cell wall remodeling and pathogenesis.
J.Biol.Chem., 289, 2014
4Q86
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YcaO with AMP Bound
分子名称: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, Ribosomal protein S12 methylthiotransferase accessory factor YcaO
著者Chekan, J.R, Nair, S.K.
登録日2014-04-25
公開日2014-08-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Discovery of a new ATP-binding motif involved in peptidic azoline biosynthesis.
Nat.Chem.Biol., 10, 2014

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