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PDB: 3275 件

8HPD
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Bry-LHCII heterotrimer of Bryopsis corticulans
分子名称: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, CHLOROPHYLL A, ...
著者Li, Z.H, Shen, J.R, Wang, W.D.
登録日2022-12-12
公開日2023-09-06
最終更新日2023-10-18
実験手法ELECTRON MICROSCOPY (2.74 Å)
主引用文献Structural and functional properties of different types of siphonous LHCII trimers from an intertidal green alga Bryopsis corticulans.
Structure, 31, 2023
8HLV
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Bry-LHCII homotrimer of Bryopsis corticulans
分子名称: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, CHLOROPHYLL A, ...
著者Li, Z.H, Shen, J.R, Wang, W.D.
登録日2022-12-01
公開日2023-09-06
最終更新日2023-10-18
実験手法ELECTRON MICROSCOPY (2.55 Å)
主引用文献Structural and functional properties of different types of siphonous LHCII trimers from an intertidal green alga Bryopsis corticulans.
Structure, 31, 2023
5NZ2
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Twist and induce: Dissecting the link between the enzymatic activity and the SaPI inducing capacity of the phage 80 dUTPase. D95E mutant from dUTPase 80alpha phage.
分子名称: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, DUTPase, MAGNESIUM ION
著者Alite, C, Humphrey, S, Donderis, J, Maiques, E, Ciges-Tomas, J.R, Penades, J.R, Marina, A.
登録日2017-05-12
公開日2017-09-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Dissecting the link between the enzymatic activity and the SaPI inducing capacity of the phage 80 alpha dUTPase.
Sci Rep, 7, 2017
5NYZ
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Twist and induce: Dissecting the link between the enzymatic activity and the SaPI inducing capacity of the phage 80 dUTPase. D95E mutant from dUTPase 80alpha phage.
分子名称: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, DUTPase, MAGNESIUM ION
著者Alite, C, Humphrey, S, Donderis, J, Maiques, E, Ciges-Tomas, J.R, Penades, J.R, Marina, A.
登録日2017-05-12
公開日2017-09-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Dissecting the link between the enzymatic activity and the SaPI inducing capacity of the phage 80 alpha dUTPase.
Sci Rep, 7, 2017
4UXV
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Cytoplasmic domain of bacterial cell division protein EzrA
分子名称: SEPTATION RING FORMATION REGULATOR EZRA
著者Cleverley, R.M, Barrett, J.R, Basle, A, Khai-Bui, N, Hewitt, L, Solovyova, A, Xu, Z, Daniela, R.A, Dixon, N.E, Harry, E.J, Oakley, A.J, Vollmer, W, Lewis, R.J.
登録日2014-08-27
公開日2014-10-22
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.961 Å)
主引用文献Structure and Function of a Spectrin-Like Regulator of Bacterial Cytokinesis.
Nat.Commun., 5, 2014
4W8T
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Crystal structure of truncated hemolysin A Q125S from P. mirabilis at 1.5 Angstroms resolution
分子名称: Hemolysin
著者Novak, W.R.P, Glasgow, E, Thompson, J.R, Weaver, T.M.
登録日2014-08-26
公開日2015-10-07
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.539 Å)
主引用文献Crystal structure of truncated hemolysin A Q125S from P. mirabilis at 1.5 Angstroms resolution
To Be Published
4UQK
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Electron density map of GluA2em in complex with quisqualate and LY451646
分子名称: (S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)-PROPIONIC ACID, GLUTAMATE RECEPTOR 2
著者Meyerson, J.R, Kumar, J, Chittori, S, Rao, P, Pierson, J, Bartesaghi, A, Mayer, M.L, Subramaniam, S.
登録日2014-06-24
公開日2014-08-13
最終更新日2017-08-02
実験手法ELECTRON MICROSCOPY (16.4 Å)
主引用文献Structural Mechanism of Glutamate Receptor Activation and Desensitization
Nature, 514, 2014
4V51
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Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin
分子名称: 16S ribosomal RNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ...
著者Selmer, M, Dunham, C.M, Murphy, F.V, Weixlbaumer, A, Petry, S, Weir, J.R, Kelley, A.C, Ramakrishnan, V.
登録日2006-07-31
公開日2014-07-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the 70S ribosome complexed with mRNA and tRNA.
Science, 313, 2006
5C0S
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Crystal structure of a generation 4 influenza hemagglutinin stabilized stem in complex with the broadly neutralizing antibody CR6261
分子名称: CR6261 antibody heavy chain, CR6261 antibody light chain, Hemagglutinin, ...
著者Boyington, J.C, Kwong, P.D, Nabel, G.J, Mascola, J.R.
登録日2015-06-12
公開日2015-09-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (4.3 Å)
主引用文献Hemagglutinin-stem nanoparticles generate heterosubtypic influenza protection.
Nat. Med., 21, 2015
1QBF
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NMR SOLUTION STRUCTURE OF PORCINE PEPTIDE YY
分子名称: PEPTIDE YY
著者Keire, D.A, Kobayashi, M, Solomon, T.E, Reeve Jr, J.R.
登録日1999-04-16
公開日2000-08-16
最終更新日2019-11-13
実験手法SOLUTION NMR
主引用文献Solution structure of monomeric peptide YY supports the functional significance of the PP-fold.
Biochemistry, 39, 2000
1QFE
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THE STRUCTURE OF TYPE I 3-DEHYDROQUINATE DEHYDRATASE FROM SALMONELLA TYPHI
分子名称: 3-AMINO-4,5-DIHYDROXY-CYCLOHEX-1-ENECARBOXYLATE, PROTEIN (3-DEHYDROQUINATE DEHYDRATASE)
著者Shrive, A.K, Polikarpov, I, Sawyer, L, Coggins, J.R, Hawkins, A.R.
登録日1999-04-05
公開日2000-04-05
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The two types of 3-dehydroquinase have distinct structures but catalyze the same overall reaction.
Nat.Struct.Biol., 6, 1999
6VVG
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Structure of the Cydia pomonella Granulovirus kinase, PK-1
分子名称: ADENOSINE MONOPHOSPHATE, Arginine kinase
著者Oliver, M.R, Horne, C.R, Keown, J.R, Murphy, J.M, Metcalf, P.
登録日2020-02-17
公開日2021-02-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Granulovirus PK-1 kinase activity relies on a side-to-side dimerization mode centered on the regulatory alpha C helix.
Nat Commun, 12, 2021
6VWV
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Transitional unit cell 2 of adenine riboswitch aptamer crystal phase transition upon ligand binding
分子名称: ADENINE, MAGNESIUM ION, POTASSIUM ION, ...
著者Stagno, J.R, Wang, Y.-X.
登録日2020-02-20
公開日2020-11-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Synchronous RNA conformational changes trigger ordered phase transitions in crystals.
Nat Commun, 12, 2021
6VL1
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Crystal Structure of the N-prenyltransferase DabA in Complex with NGG and Mg2+
分子名称: DabA, MAGNESIUM ION, N-[(2E)-3,7-dimethylocta-2,6-dien-1-yl]-L-glutamic acid
著者Chekan, J.R, Noel, J.P, Moore, B.S.
登録日2020-01-22
公開日2020-04-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Algal neurotoxin biosynthesis repurposes the terpene cyclase structural fold into anN-prenyltransferase.
Proc.Natl.Acad.Sci.USA, 117, 2020
1ZV1
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Crystal structure of the dimerization domain of doublesex protein from D. melanogaster
分子名称: Doublesex protein
著者Weiss, M.A, Bayrer, J.R, Wan, Z, Li, B, Phillips, N.B.
登録日2005-06-01
公開日2005-08-09
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Dimerization of doublesex is mediated by a cryptic ubiquitin-associated domain fold: implications for sex-specific gene regulation
J.Biol.Chem., 280, 2005
6VKZ
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Crystal Structure of the N-prenyltransferase DabA in Complex with GSPP and Mg2+
分子名称: DabA, GERANYL S-THIOLODIPHOSPHATE, MAGNESIUM ION
著者Chekan, J.R, Noel, J.P, Moore, B.S.
登録日2020-01-22
公開日2020-04-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Algal neurotoxin biosynthesis repurposes the terpene cyclase structural fold into anN-prenyltransferase.
Proc.Natl.Acad.Sci.USA, 117, 2020
1ZTU
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Structure of the chromophore binding domain of bacterial phytochrome
分子名称: BILIVERDINE IX ALPHA, Bacteriophytochrome
著者Wagner, J.R, Brunzelle, J.S, Forest, K.T, Vierstra, R.D.
登録日2005-05-27
公開日2005-11-15
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A light-sensing knot revealed by the structure of the chromophore-binding domain of phytochrome.
Nature, 438, 2005
1ZUO
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Structure of Human Ubiquitin-Conjugating Enzyme (UBCi) Involved in Embryo Attachment and Implantation
分子名称: BETA-MERCAPTOETHANOL, Hypothetical protein LOC92912
著者Walker, J.R, Avvakumov, G.V, Cui, H, Newman, E.M, Mackenzie, F, Sundstrom, M, Arrowsmith, C, Edwards, A, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
登録日2005-05-31
公開日2005-07-05
最終更新日2012-11-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A human ubiquitin conjugating enzyme (E2)-HECT E3 ligase structure-function screen.
Mol Cell Proteomics, 11, 2012
1ZXA
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Solution Structure of the Coiled-Coil Domain of cGMP-dependent Protein Kinase Ia
分子名称: cGMP-dependent protein kinase 1, alpha isozyme
著者Schnell, J.R, Zhou, G.P, Zweckstetter, M, Rigby, A.C, Chou, J.J.
登録日2005-06-07
公開日2005-09-13
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Rapid and accurate structure determination of coiled-coil domains using NMR dipolar couplings: Application to cGMP-dependent protein kinase I{alpha}
Protein Sci., 14, 2005
6FIE
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Crystallographic structure of calcium loaded Calbindin-D28K.
分子名称: CALCIUM ION, Calbindin, THIOCYANATE ION
著者Noble, J.W, Almalki, R, Roe, S.M, Wagner, A, Dumanc, R, Atack, J.R.
登録日2018-01-18
公開日2018-10-10
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献The X-ray structure of human calbindin-D28K: an improved model.
Acta Crystallogr D Struct Biol, 74, 2018
2A2N
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Crystal Structure of the peptidylprolyl isomerase domain of Human PPWD1
分子名称: GLYCEROL, peptidylprolyl isomerase domain and WD repeat containing 1
著者Walker, J.R, Davis, T.L, Newman, E.M, Mackenzie, F, Sundstrom, M, Arrowsmith, C, Edwards, A, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
登録日2005-06-22
公開日2005-07-05
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The crystal structure of human WD40 repeat-containing peptidylprolyl isomerase (PPWD1).
Febs J., 275, 2008
6P64
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Alpha-beta TCR Binding to Neoantigen KQWLVWLFL Presented by HLA-A206
分子名称: 302TIL TCR alpha chain, 302TIL TCR beta chain, Beta-2-microglobulin, ...
著者Devlin, J.R, Baker, B.M.
登録日2019-05-31
公開日2020-06-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献A T cell receptor peptide/MHC complex at 3.05 Angstrom resolution
To be Published
2A7L
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Structure of the human hypothetical ubiquitin-conjugating enzyme, LOC55284
分子名称: Hypothetical ubiquitin-conjugating enzyme LOC55284, SODIUM ION
著者Walker, J.R, Avvakumov, G.V, Xue, S, Newman, E.M, Mackenzie, F, Weigelt, J, Sundstrom, M, Arrowsmith, C, Edwards, A, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
登録日2005-07-05
公開日2005-09-06
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献A human ubiquitin conjugating enzyme (E2)-HECT E3 ligase structure-function screen.
Mol Cell Proteomics, 11, 2012
6VL0
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Crystal Structure of the N-prenyltransferase DabA in Complex with GSPP and Mn2+
分子名称: DabA, GERANYL S-THIOLODIPHOSPHATE, MAGNESIUM ION, ...
著者Chekan, J.R, Noel, J.P, Moore, B.S.
登録日2020-01-22
公開日2020-04-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Algal neurotoxin biosynthesis repurposes the terpene cyclase structural fold into anN-prenyltransferase.
Proc.Natl.Acad.Sci.USA, 117, 2020
2A8D
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Haemophilus influenzae beta-carbonic anhydrase complexed with bicarbonate
分子名称: BICARBONATE ION, Carbonic anhydrase 2, SULFATE ION, ...
著者Cronk, J.D, Rowlett, R.S, Zhang, K.Y.J, Tu, C, Endrizzi, J.A, Lee, J, Gareiss, P.C, Preiss, J.R.
登録日2005-07-07
公開日2006-04-18
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Identification of a Novel Noncatalytic Bicarbonate Binding Site in Eubacterial beta-Carbonic Anhydrase
Biochemistry, 45, 2006

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件を2024-08-07に公開中

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