Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 3296 件

1UT8
DownloadVisualize
BU of 1ut8 by Molmil
Divalent metal ions (zinc) bound to T5 5'-exonuclease
分子名称: EXODEOXYRIBONUCLEASE, ZINC ION
著者Ceska, T.A, Sayers, J.R, Suck, D.
登録日2003-12-04
公開日2004-02-05
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Roles of Divalent Metal Ions in Flap Endonuclease-Substrate Interactions
Nat.Struct.Mol.Biol., 11, 2004
1V1J
DownloadVisualize
BU of 1v1j by Molmil
Crystal structure of type II Dehydroquintae Dehydratase from Streptomyces coelicolor in complex with 3-fluoro
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-ANHYDRO-3-FLUORO-QUINIC ACID, 3-DEHYDROQUINATE DEHYDRATASE
著者Roszak, A.W, Coggins, J.R, Lapthorn, A.J.
登録日2004-04-16
公開日2005-01-26
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献(1R,4S,5R)-3-Fluoro-1,4,5-Trihydroxy-2-Cyclohexene-1-Carboxylic Acid: The Fluoro Analogue of the Enolate Intermediate in the Reaction Catalyzed by Type II Dehydroquinases
Org.Biomol.Chem., 2, 2004
3Q66
DownloadVisualize
BU of 3q66 by Molmil
Structure of the Vps75-Rtt109 histone chaperone-lysine acetyltransferase complex (Full-length proteins in space group P6122)
分子名称: Histone acetyltransferase RTT109, SULFATE ION, Vacuolar protein sorting-associated protein 75
著者Su, D, Thompson, J.R, Mer, G.
登録日2010-12-30
公開日2011-03-23
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.705 Å)
主引用文献Structure and histone binding properties of the Vps75-Rtt109 chaperone-lysine acetyltransferase complex.
J.Biol.Chem., 286, 2011
3QXU
DownloadVisualize
BU of 3qxu by Molmil
Free Structure of an Anti-Methotrexate CDR1-3 Graft VHH Antibody
分子名称: Anti-Methotrexate CDR1-3 Graft, FORMIC ACID
著者Fanning, S.W, Horn, J.R.
登録日2011-03-02
公開日2011-07-06
最終更新日2013-09-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献An anti-hapten camelid antibody reveals a cryptic binding site with significant energetic contributions from a nonhypervariable loop.
Protein Sci., 20, 2011
3QXT
DownloadVisualize
BU of 3qxt by Molmil
Structure of an Anti-Methotrexate CDR1-3 Graft VHH Antibody in Complex with Methotrexate
分子名称: Anti-Methotrexate CDR1-3 Graft VHH, METHOTREXATE, SODIUM ION
著者Fanning, S.W, Horn, J.R.
登録日2011-03-02
公開日2011-07-06
最終更新日2013-09-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献An anti-hapten camelid antibody reveals a cryptic binding site with significant energetic contributions from a nonhypervariable loop.
Protein Sci., 20, 2011
3QOA
DownloadVisualize
BU of 3qoa by Molmil
Crystal structure of a human cytochrome P450 2B6 (Y226H/K262R) in complex with the inhibitor 4-Benzylpyridine.
分子名称: 4-benzylpyridine, 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE, Cytochrome P450 2B6, ...
著者Shah, M.B, Pascual, J, Stout, C.D, Halpert, J.R.
登録日2011-02-09
公開日2011-09-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structures of Cytochrome P450 2B6 Bound to 4-Benzylpyridine and 4-(4-Nitrobenzyl)pyridine: Insight into Inhibitor Binding and Rearrangement of Active Site Side Chains.
Mol.Pharmacol., 80, 2011
1TJG
DownloadVisualize
BU of 1tjg by Molmil
Crystal Structure of the broadly neutralizing anti-HIV-1 antibody 2F5 in complex with a gp41 7mer epitope
分子名称: 1,2-ETHANEDIOL, Envelope glycoprotein GP41, FAB 2F5 Heavy Chain, ...
著者Ofek, G, Tang, M, Sambor, A, Katinger, H, Mascola, J.R, Wyatt, R, Kwong, P.D.
登録日2004-06-04
公開日2004-10-05
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and mechanistic analysis of the Anti-Human Immunodeficiency Virus Type 1 antibody 2F5 in complex with its gp41 epitope
J.Virol., 78, 2004
3QSK
DownloadVisualize
BU of 3qsk by Molmil
5 Histidine Variant of the anti-RNase A VHH in Complex with RNAse A
分子名称: Engineered 5 Histidine anti-RNase A Camelid VHH Antibody Domain Variant, Ribonuclease pancreatic
著者Murtaugh, M.L, Fanning, S.W, Sharma, T.M, Terry, A.M, Horn, J.R.
登録日2011-02-21
公開日2011-08-10
最終更新日2011-11-30
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A combinatorial histidine scanning library approach to engineer highly pH-dependent protein switches.
Protein Sci., 20, 2011
3TXE
DownloadVisualize
BU of 3txe by Molmil
HEWL co-crystallization with carboplatin in aqueous media with paratone as the cryoprotectant
分子名称: 2-methylprop-1-ene, CHLORIDE ION, Lysozyme C, ...
著者Tanley, S.W.M, Schreurs, A.M.M, Helliwell, J.R, Kroon-Batenburg, L.M.J.
登録日2011-09-23
公開日2013-01-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Experience with exchange and archiving of raw data: comparison of data from two diffractometers and four software packages on a series of lysozyme crystals.
J.Appl.Crystallogr., 46, 2013
3TXK
DownloadVisualize
BU of 3txk by Molmil
HEWL co-crystallization with cisplatin in DMSO media with paratone as the cryoprotectant at pH 6.5
分子名称: CHLORIDE ION, Cisplatin, DIMETHYL SULFOXIDE, ...
著者Tanley, S.W.M, Schreurs, A.M.M, Helliwell, J.R, Kroon-Batenburg, L.M.J.
登録日2011-09-23
公開日2013-01-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Experience with exchange and archiving of raw data: comparison of data from two diffractometers and four software packages on a series of lysozyme crystals.
J.Appl.Crystallogr., 46, 2013
3U25
DownloadVisualize
BU of 3u25 by Molmil
Crystal structure of P. aeruginoas azurin containing a Tyr-His hydrogen bonded pair
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Azurin, COPPER (II) ION
著者Warren, J.J, Winkler, J.R, Gray, H.B.
登録日2011-09-30
公開日2011-12-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Redox properties of tyrosine and related molecules.
Febs Lett., 586, 2012
1W39
DownloadVisualize
BU of 1w39 by Molmil
Crystal structure of an artificial top component of turnip yellow mosaic virus
分子名称: TURNIP YELLOW MOSAIC VIRUS EMPTY CAPSID
著者van Roon, A.M.M, Bink, H.H.J, Plaisier, J.R, Pleij, C.W.A, Abrahams, J.P, Pannu, N.S.
登録日2004-07-14
公開日2004-08-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.75 Å)
主引用文献Crystal Structure of an Empty Capsid of Turnip Yellow Mosaic Virus.
J.Mol.Biol., 341, 2004
3RFN
DownloadVisualize
BU of 3rfn by Molmil
Epitope backbone grafting by computational design for improved presentation of linear epitopes on scaffold proteins
分子名称: BB_1wnu_001, ZINC ION
著者Azoitei, M.L, Ban, Y.A, Julien, J.P, Bryson, S, Schroeter, A, Kalyuzhniy, O, Porter, J.R, Adachi, Y, Baker, D, Szabo, E, Pai, E.F, Schief, W.R.
登録日2011-04-06
公開日2011-11-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Computational design of high-affinity epitope scaffolds by backbone grafting of a linear epitope.
J.Mol.Biol., 415, 2012
3RK6
DownloadVisualize
BU of 3rk6 by Molmil
Crystal structure of the middle domain of human Paip1
分子名称: Polyadenylate-binding protein-interacting protein 1
著者Lei, J, Mesters, J.R, Hilgenfeld, R.
登録日2011-04-17
公開日2011-05-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the middle domain of human poly(A)-binding protein-interacting protein 1.
Biochem.Biophys.Res.Commun., 408, 2011
1U71
DownloadVisualize
BU of 1u71 by Molmil
Understanding the Role of Leu22 Variants in Methotrexate Resistance: Comparison of Wild-type and Leu22Arg Variant Mouse and Human Dihydrofolate Reductase Ternary Crystal Complexes with Methotrexate and NADPH
分子名称: 6-(2,5-DIMETHOXY-BENZYL)-5-METHYL-PYRIDO[2,3-D]PYRIMIDINE-2,4-DIAMINE, Dihydrofolate reductase, SULFATE ION
著者Cody, V, Luft, J.R, Pangborn, W.
登録日2004-08-02
公開日2005-02-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Understanding the role of Leu22 variants in methotrexate resistance: comparison of wild-type and Leu22Arg variant mouse and human dihydrofolate reductase ternary crystal complexes with methotrexate and NADPH.
Acta Crystallogr.,Sect.D, 61, 2005
3RAY
DownloadVisualize
BU of 3ray by Molmil
Crystal structure of Methyltransferase domain of human PR domain-containing protein 11
分子名称: CHLORIDE ION, PR domain-containing protein 11, SODIUM ION, ...
著者Dong, A, Zeng, H, Loppnau, P, Walker, J.R, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Min, J, Wu, H, Structural Genomics Consortium (SGC)
登録日2011-03-28
公開日2011-04-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Crystal structure of Methyltransferase domain of human PR domain-containing protein 11
To be Published
3RDH
DownloadVisualize
BU of 3rdh by Molmil
X-ray induced covalent inhibition of 14-3-3
分子名称: 14-3-3 protein zeta/delta, 4-[(E)-{4-formyl-5-hydroxy-6-methyl-3-[(phosphonooxy)methyl]pyridin-2-yl}diazenyl]benzoic acid, NICKEL (II) ION
著者Horton, J.R, Upadhyay, A.K, Fu, H, Cheng, X.
登録日2011-04-01
公開日2011-09-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Discovery and structural characterization of a small molecule 14-3-3 protein-protein interaction inhibitor.
Proc.Natl.Acad.Sci.USA, 108, 2011
1UD7
DownloadVisualize
BU of 1ud7 by Molmil
SOLUTION STRUCTURE OF THE DESIGNED HYDROPHOBIC CORE MUTANT OF UBIQUITIN, 1D7
分子名称: PROTEIN (UBIQUITIN CORE MUTANT 1D7)
著者Johnson, E.C, Lazar, G.A, Desjarlais, J.R, Handel, T.M.
登録日1999-04-07
公開日1999-05-06
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure and dynamics of a designed hydrophobic core variant of ubiquitin.
Structure Fold.Des., 7, 1999
3TXF
DownloadVisualize
BU of 3txf by Molmil
HEWL co-crystallization with cisplatin in DMSO media with glycerol as the cryoprotectant
分子名称: CHLORIDE ION, Cisplatin, DIMETHYL SULFOXIDE, ...
著者Tanley, S.W.M, Schreurs, A.M.M, Helliwell, J.R, Kroon-Batenburg, L.M.J.
登録日2011-09-23
公開日2013-01-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Experience with exchange and archiving of raw data: comparison of data from two diffractometers and four software packages on a series of lysozyme crystals.
J.Appl.Crystallogr., 46, 2013
1VRX
DownloadVisualize
BU of 1vrx by Molmil
Endocellulase e1 from acidothermus cellulolyticus mutant y245g
分子名称: ENDOCELLULASE E1 FROM A. CELLULOLYTICUS
著者Baker, J.O, McCarley, J.R, Lovett, R, Yu, C.H, Adney, W.S, Rignall, T.R, Vinzant, T.B, Decker, S.R, Sakon, J, Himmel, M.E.
登録日2005-06-30
公開日2005-07-05
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Catalytically enhanced endocellulase Cel5A from Acidothermus cellulolyticus.
Appl.Biochem.Biotechnol., 121-124, 2005
3U12
DownloadVisualize
BU of 3u12 by Molmil
The pleckstrin homology (PH) domain of USP37
分子名称: 1,2-ETHANEDIOL, ACETATE ION, SULFATE ION, ...
著者Dong, A, Nair, U.B, Wernimont, A, Walker, J.R, Weigelt, J, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
登録日2011-09-29
公開日2011-11-09
最終更新日2012-05-02
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献The pleckstrin homology (PH) domain of USP37
To be Published
3U7A
DownloadVisualize
BU of 3u7a by Molmil
AL-09 Y32F Y96F
分子名称: Amyloidogenic immunoglobulin light chain protein AL-09 Y32F Y96F, variable domain
著者DiCostanzo, A.C, Thompson, J.R, Ramirez-Alvarado, M.
登録日2011-10-13
公開日2012-07-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Tyrosine Residues mediate crucial interactions in amyloid formation for immunoglobulin light chains
To be Published
1VKG
DownloadVisualize
BU of 1vkg by Molmil
Crystal Structure of Human HDAC8 complexed with CRA-19156
分子名称: 5-(4-METHYL-BENZOYLAMINO)-BIPHENYL-3,4'-DICARBOXYLIC ACID 3-DIMETHYLAMIDE-4'-HYDROXYAMIDE, Histone deacetylase 8, SODIUM ION, ...
著者Somoza, J.R, Skene, R.J, Katz, B.A, Mol, C, Ho, J.D, Jennings, A.J, Luong, C, Arvai, A, Buggy, J.J, Chi, E, Tang, J, Sang, B.-C, Verner, E, Wynands, R, Leahy, E.M, Dougan, D.R, Snell, G, Navre, M, Knuth, M.W, Swanson, R.V, McRee, D.E, Tari, L.W.
登録日2004-05-13
公開日2004-07-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Snapshots of Human HDAC8 Provide Insights into the Class I Histone Deacetylases
Structure, 12, 2004
3TIP
DownloadVisualize
BU of 3tip by Molmil
Crystal structure of Staphylococcus aureus SasG E-G52 module
分子名称: Surface protein G
著者Gruszka, D.T, Wojdyla, J.A, Turkenburg, J.P, Potts, J.R.
登録日2011-08-21
公開日2012-04-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.7009 Å)
主引用文献Staphylococcal biofilm-forming protein has a contiguous rod-like structure.
Proc.Natl.Acad.Sci.USA, 109, 2012
3TXD
DownloadVisualize
BU of 3txd by Molmil
HEWL co-crystallization with carboplatin in aqueous media with glycerol as the cryoprotectant
分子名称: CHLORIDE ION, GLYCEROL, Lysozyme C, ...
著者Tanley, S.W.M, Schreurs, A.M.M, Helliwell, J.R, Kroon-Batenburg, L.M.J.
登録日2011-09-23
公開日2013-01-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Experience with exchange and archiving of raw data: comparison of data from two diffractometers and four software packages on a series of lysozyme crystals.
J.Appl.Crystallogr., 46, 2013

224572

件を2024-09-04に公開中

PDB statisticsPDBj update infoContact PDBjnumon