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PDB: 3296 results

8E3K
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BU of 8e3k by Molmil
Human PU.1 ETS-Domain (165-270) Bound to d(AATAAGCGGAAGTGGG)
Descriptor: DNA (5'-D(*AP*AP*TP*AP*AP*GP*CP*GP*GP*AP*AP*GP*TP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*AP*CP*TP*TP*CP*CP*GP*CP*TP*TP*AP*T)-3'), SODIUM ION, ...
Authors:Terrell, J.R, Poon, G.M.K.
Deposit date:2022-08-17
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:DNA selection by the master transcription factor PU.1.
Cell Rep, 42, 2023
8E5Y
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BU of 8e5y by Molmil
Human PU.1 ETS-Domain Bound to d(AATAAGCGGAAGTGGG) Acetate Free at pH 5.4
Descriptor: DNA (5'-D(*AP*AP*TP*AP*AP*GP*CP*GP*GP*AP*AP*GP*TP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*AP*CP*TP*TP*CP*CP*GP*CP*TP*TP*AP*T)-3'), SODIUM ION, ...
Authors:Terrell, J.R, Poon, G.M.K.
Deposit date:2022-08-22
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:DNA selection by the master transcription factor PU.1.
Cell Rep, 42, 2023
8EBH
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Human PU.1 ETS-Domain (165-270) Bound to d(AATAAGCGGAATGGGG)
Descriptor: DNA (5'-D(*AP*AP*TP*AP*AP*GP*CP*GP*GP*AP*AP*TP*GP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*CP*AP*TP*TP*CP*CP*GP*CP*TP*TP*AP*T)-3'), Transcription factor PU.1
Authors:Terrell, J.R, Poon, G.M.K.
Deposit date:2022-08-31
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:DNA selection by the master transcription factor PU.1.
Cell Rep, 42, 2023
3J3I
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BU of 3j3i by Molmil
Penicillium chrysogenum virus (PcV) capsid structure
Descriptor: Capsid protein
Authors:Luque, D, Gomez-Blanco, J, Garriga, D, Brilot, A, Gonzalez, J.M, Havens, W.H, Carrascosa, J.L, Trus, B.L, Verdaguer, N, Grigorieff, N, Ghabrial, S.A, Caston, J.R.
Deposit date:2013-03-08
Release date:2014-05-14
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM near-atomic structure of a dsRNA fungal virus shows ancient structural motifs preserved in the dsRNA viral lineage.
Proc.Natl.Acad.Sci.USA, 111, 2014
1H05
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BU of 1h05 by Molmil
3-DEHYDROQUINATE DEHYDRATASE FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH SULPHATE
Descriptor: 3-DEHYDROQUINATE DEHYDRATASE, SULFATE ION
Authors:Roszak, A.W, Coggins, J.R, Lapthorn, A.J.
Deposit date:2002-06-11
Release date:2002-10-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Specificity of Substrate Recognition by Type II Dehydroquinases as Revealed by Binding of Polyanions(1)
FEBS Lett., 530, 2002
3J34
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BU of 3j34 by Molmil
Structure of HIV-1 Capsid Protein by Cryo-EM
Descriptor: capsid protein
Authors:Zhao, G, Perilla, J.R, Yufenyuy, E, Meng, X, Chen, B, Ning, J, Ahn, J, Gronenborn, A.M, Schulten, K, Aiken, C, Zhang, P.
Deposit date:2013-02-23
Release date:2013-05-29
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (8.6 Å)
Cite:Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Nature, 497, 2013
3K6T
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BU of 3k6t by Molmil
Crystal structure of the GLD-1 homodimerization domain from Caenorhabditis elegans at 2.04 A resolution
Descriptor: Female germline-specific tumor suppressor gld-1
Authors:Beuck, C, Szymczyna, B.R, Kerkow, D.E, Carmel, A.B, Columbus, L, Stanfield, R.L, Williamson, J.R.
Deposit date:2009-10-09
Release date:2010-03-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structure of the GLD-1 homodimerization domain: insights into STAR protein-mediated translational regulation.
Structure, 18, 2010
6KAF
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BU of 6kaf by Molmil
C2S2M2N2-type PSII-LHCII
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Chang, S.H, Shen, L.L, Huang, Z.H, Wang, W.D, Han, G.Y, Shen, J.R, Zhang, X.
Deposit date:2019-06-22
Release date:2019-10-23
Last modified:2019-11-20
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:Structure of a C2S2M2N2-type PSII-LHCII supercomplex from the green algaChlamydomonas reinhardtii.
Proc.Natl.Acad.Sci.USA, 116, 2019
4ZJG
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BU of 4zjg by Molmil
Crystal structure of native alpha-2-macroglobulin from Escherichia coli spanning domains MG0-NIE-MG1.
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, PENTAETHYLENE GLYCOL, ...
Authors:Garcia-Ferrer, I, Arede, P, Gomez-Blanco, J, Luque, D, Duquerroy, S, Caston, J.R, Goulas, T, Gomis-Ruth, X.F.
Deposit date:2015-04-29
Release date:2015-06-10
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and functional insights into Escherichia coli alpha 2-macroglobulin endopeptidase snap-trap inhibition.
Proc.Natl.Acad.Sci.USA, 112, 2015
8DVW
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BU of 8dvw by Molmil
Structure of the Campylobacter concisus glycosyltransferase PglA R203Q
Descriptor: N, N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase, URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE
Authors:Vuksanovic, N, Clasman, J.R, Bernstein, H.M, Imperiali, B, Allen, K.N.
Deposit date:2022-07-30
Release date:2024-01-17
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Specificity determinants revealed by the structure of glycosyltransferase Campylobacter concisus PglA.
Protein Sci., 33, 2024
8DVZ
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BU of 8dvz by Molmil
Structure of the Campylobacter concisus glycosyltransferase PglA R282V variant
Descriptor: N, N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase, URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE
Authors:Vuksanovic, N, Clasman, J.R, Bernstein, H.M, Imperiali, B, Allen, K.N.
Deposit date:2022-07-30
Release date:2024-01-17
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Specificity determinants revealed by the structure of glycosyltransferase Campylobacter concisus PglA.
Protein Sci., 33, 2024
8DQD
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BU of 8dqd by Molmil
Structure of the Campylobacter concisus glycosyltransferase PglA
Descriptor: N, N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase, URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE
Authors:Vuksanovic, N, Clasman, J.R, Bernstein, H.M, Imperiali, B, Allen, K.N.
Deposit date:2022-07-18
Release date:2024-01-17
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Specificity determinants revealed by the structure of glycosyltransferase Campylobacter concisus PglA.
Protein Sci., 33, 2024
6HG5
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BU of 6hg5 by Molmil
Influenza A virus N6 neuraminidase complex with Oseltamivir (Duck/England/56).
Descriptor: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Salinger, M.T, Hobbs, J.R, Murray, J.W, Laver, W.G, Kuhn, P, Garman, E.F.
Deposit date:2018-08-22
Release date:2018-08-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High Resolution Structures of Viral Neuraminidase with Drugs Bound in the Active Site.
To Be Published
8EW3
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BU of 8ew3 by Molmil
Cryo EM structure of Vibrio cholerae NQR
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, Na(+)-translocating NADH-quinone reductase subunit A, ...
Authors:Fuller, J.R, Juarez, O.
Deposit date:2022-10-21
Release date:2022-11-16
Method:ELECTRON MICROSCOPY (2.65159 Å)
Cite:Novel cofactor binding motifs, electron transfer and ion pumping mechanisms of the respiratory complex NQR
To Be Published
6H9Y
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BU of 6h9y by Molmil
Unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Outer capsid protein VP4, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Ciges-Tomas, J.R, Gozalbo-Rovira, R, Vila-Vicent, S, Buesa, J, Santiso-Bellon, C, Monedero, V, Yebra, M.J, Rodriguez-Diaz, J, Marina, A.
Deposit date:2018-08-06
Release date:2019-06-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens.
Plos Pathog., 15, 2019
8EVU
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BU of 8evu by Molmil
Cryo EM structure of Vibrio cholerae NQR
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, Na(+)-translocating NADH-quinone reductase subunit A, ...
Authors:Fuller, J.R, Juarez, O.
Deposit date:2022-10-20
Release date:2022-11-16
Method:ELECTRON MICROSCOPY (2.5804 Å)
Cite:Novel cofactor binding motifs, electron transfer and ion pumping mechanisms of the respiratory complex NQR
To Be Published
8EW6
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BU of 8ew6 by Molmil
Anti-human CD8 VHH complex with CD8 alpha
Descriptor: Anti-CD8 alpha VHH, T-cell surface glycoprotein CD8 alpha chain
Authors:Kiefer, J.R, Williams, S, Davies, C.W, Koerber, J.T, Sriraman, S.K, Yin, Y.P.
Deposit date:2022-10-21
Release date:2022-11-23
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.904 Å)
Cite:Development of an 18 F-labeled anti-human CD8 VHH for same-day immunoPET imaging.
Eur J Nucl Med Mol Imaging, 50, 2023
3KCI
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BU of 3kci by Molmil
The third RLD domain of HERC2
Descriptor: Probable E3 ubiquitin-protein ligase HERC2
Authors:Walker, J.R, Qiu, L, Vesterberg, A, Weigelt, J, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S.
Deposit date:2009-10-21
Release date:2009-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the Third RLD Domain of Herc2
To be Published
3KBL
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BU of 3kbl by Molmil
Crystal structure of the GLD-1 homodimerization domain from Caenorhabditis elegans N169A mutant at 2.28 A resolution
Descriptor: Female germline-specific tumor suppressor gld-1
Authors:Beuck, C, Szymczyna, B.R, Kerkow, D.E, Carmel, A.B, Columbus, L, Stanfield, R.L, Williamson, J.R.
Deposit date:2009-10-20
Release date:2010-03-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structure of the GLD-1 homodimerization domain: insights into STAR protein-mediated translational regulation.
Structure, 18, 2010
6KMW
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BU of 6kmw by Molmil
Structure of PSI from H. hongdechloris grown under white light condition
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Kato, K, Nagao, R, Shen, J.R, Miyazaki, N, Akita, F.
Deposit date:2019-08-01
Release date:2020-01-15
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.35 Å)
Cite:Structural basis for the adaptation and function of chlorophyll f in photosystem I.
Nat Commun, 11, 2020
3GZL
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BU of 3gzl by Molmil
Crystal Structure of holo PfACP Disulfide-Linked Dimer
Descriptor: 4'-PHOSPHOPANTETHEINE, Acyl carrier protein
Authors:Gallagher, J.R, Prigge, S.T.
Deposit date:2009-04-07
Release date:2009-04-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Plasmodium falciparum acyl carrier protein crystal structures in disulfide-linked and reduced states and their prevalence during blood stage growth.
Proteins, 78, 2010
3GNG
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BU of 3gng by Molmil
P21B crystal structure of R1-R7 of Murine MVP
Descriptor: Major vault protein
Authors:Querol-Audi, J, Casanas, A, Uson, I, Caston, J.R, Fita, I, Verdaguer, N.
Deposit date:2009-03-17
Release date:2009-11-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:The mechanism of vault opening from the high resolution structure of the N-terminal repeats of MVP
Embo J., 28, 2009
3H1D
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BU of 3h1d by Molmil
Structure of the HUWE1 HECT Domain
Descriptor: E3 ubiquitin-protein ligase HUWE1, SULFATE ION
Authors:Partridge, J.R, Schwartz, T.U.
Deposit date:2009-04-11
Release date:2009-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.892 Å)
Cite:A structural element within the HUWE1 HECT domain modulates self-ubiquitination and substrate ubiquitination activities.
J.Biol.Chem., 285, 2010
6KH8
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BU of 6kh8 by Molmil
Solution structure of Zn free Bovine Pancreatic Insulin in 20% acetic acid-d4 (pH 1.9)
Descriptor: Insulin A Chain, Insulin B chain
Authors:Bhunia, A, Ratha, B.N, Kar, R.K, Brender, J.R.
Deposit date:2019-07-14
Release date:2020-10-07
Last modified:2020-11-18
Method:SOLUTION NMR
Cite:High-resolution structure of a partially folded insulin aggregation intermediate.
Proteins, 88, 2020
3KKA
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BU of 3kka by Molmil
Co-crystal structure of the sam domains of EPHA1 AND EPHA2
Descriptor: CHLORIDE ION, EPHRIN TYPE-A RECEPTOR 1, EPHRIN TYPE-A RECEPTOR 2
Authors:Walker, J.R, Yermekbayeva, L, Butler-Cole, C, Weigelt, J, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2009-11-05
Release date:2009-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Co-Crystal Structure of the SAM Domains of Human Ephrin Type-A Receptor 1 and Human Ephrin Type-A Receptor 2
To be Published

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PDB entries from 2024-09-04

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