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PDB: 3067 results

3S3X
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BU of 3s3x by Molmil
Structure of chicken acid-sensing ion channel 1 AT 3.0 A resolution in complex with psalmotoxin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Amiloride-sensitive cation channel 2, neuronal, ...
Authors:Dawson, R.J.P, Benz, J, Stohler, P, Tetaz, T, Joseph, C, Huber, S, Schmid, G, Huegin, D, Pflimlin, P, Trube, G, Rudolph, M.G, Hennig, M, Ruf, A.
Deposit date:2011-05-18
Release date:2012-05-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Structure of the Acid-sensing ion channel 1 in complex with the gating modifier Psalmotoxin 1.
Nat Commun, 3, 2012
5OXH
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BU of 5oxh by Molmil
C-terminally retracted ubiquitin T66V/L67N mutant
Descriptor: SULFATE ION, Ubiquitin T66V/L67N mutant
Authors:Gladkova, C, Schubert, A.F, Wagstaff, J.L, Pruneda, J.P, Freund, S.M.V, Komander, D.
Deposit date:2017-09-06
Release date:2017-11-22
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:An invisible ubiquitin conformation is required for efficient phosphorylation by PINK1.
EMBO J., 36, 2017
3S3W
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Structure of chicken acid-sensing ion channel 1 at 2.6 a resolution and ph 7.5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Amiloride-sensitive cation channel 2, ...
Authors:Dawson, R.J.P, Benz, J, Stohler, P, Tetaz, T, Joseph, C, Huber, S, Schmid, G, Huegin, D, Pflimlin, P, Trube, G, Rudolph, M.G, Hennig, M, Ruf, A.
Deposit date:2011-05-18
Release date:2012-05-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the Acid-sensing ion channel 1 in complex with the gating modifier Psalmotoxin 1.
Nat Commun, 3, 2012
6X87
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BU of 6x87 by Molmil
CryoEM structure of the Plasmodium berghei circumsporozoite protein in complex with inhibitory mouse antibody 3D11.
Descriptor: 3D11 Fab heavy chain, 3D11 Fab kappa chain, Circumsporozoite protein
Authors:Kucharska, I, Thai, E, Rubinstein, J, Julien, J.P.
Deposit date:2020-06-01
Release date:2020-12-02
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural ordering of the Plasmodium berghei circumsporozoite protein repeats by inhibitory antibody 3D11.
Elife, 9, 2020
3SOI
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BU of 3soi by Molmil
Crystallographic structure of Bacillus licheniformis beta-lactamase W210F/W229F/W251F at 1.73 angstrom resolution
Descriptor: Beta-lactamase, CITRIC ACID
Authors:Acierno, J.P, Capaldi, S, Risso, V.A, Monaco, H.L, Ermacora, M.R.
Deposit date:2011-06-30
Release date:2011-12-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.729 Å)
Cite:X-ray evidence of a native state with increased compactness populated by tryptophan-less B. licheniformis beta-lactamase.
Protein Sci., 21, 2012
6X8S
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BU of 6x8s by Molmil
Crystal structure of 3D11 Fab in complex with Plasmodium berghei circumsporozoite protein NAND peptide
Descriptor: 1,2-ETHANEDIOL, 3D11 Fab heavy chain, 3D11 Fab light chain, ...
Authors:Thai, E, Julien, J.P.
Deposit date:2020-06-01
Release date:2020-12-02
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural ordering of the Plasmodium berghei circumsporozoite protein repeats by inhibitory antibody 3D11.
Elife, 9, 2020
5ONR
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BU of 5onr by Molmil
Alzheimer's Amyloid-Beta Peptide Fragment 1-40 in Complex with Thermolysin
Descriptor: Amyloid-beta A4 protein, CALCIUM ION, DIMETHYL SULFOXIDE, ...
Authors:Leite, J.P, Gales, L.
Deposit date:2017-08-04
Release date:2018-08-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Alzheimer's A beta1-40peptide degradation by thermolysin: evidence of inhibition by a C-terminal A beta product.
FEBS Lett., 593, 2019
7UQT
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BU of 7uqt by Molmil
Solution NMR structure of hexahistidine tagged QseM (6H-QseM)
Descriptor: Quorum sensing master protein
Authors:Hall, D.A, Solomon, P.D, Bond, C.S, Ramsay, J.P, Mackay, J.P.
Deposit date:2022-04-20
Release date:2023-03-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:DUF2285 is a novel helix-turn-helix domain variant that orchestrates both activation and antiactivation of conjugative element transfer in proteobacteria.
Nucleic Acids Res., 51, 2023
4UNG
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BU of 4ung by Molmil
Human insulin B26Asn mutant crystal structure
Descriptor: INSULIN A CHAIN, INSULIN B CHAIN, SULFATE ION
Authors:Zakova, L, Klevtikova, E, Lepsik, M, Collinsova, M, Watson, C.J, Turkenburg, J.P, Jiracek, J, Brzozowski, A.M.
Deposit date:2014-05-28
Release date:2014-10-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Human Insulin Analogues Modified at the B26 Site Reveal a Hormone Conformation that is Undetected in the Receptor Complex
Acta Crystallogr.,Sect.D, 70, 2014
4UNH
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BU of 4unh by Molmil
Human insulin B26Gly mutant crystal structure
Descriptor: INSULIN A CHAIN, INSULIN B CHAIN, SULFATE ION
Authors:Zakova, L, Klevtikova, E, Lepsik, M, Collinsova, M, Watson, C.J, Turkenburg, J.P, Jiracek, J, Brzozowski, A.M.
Deposit date:2014-05-28
Release date:2014-10-15
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Human Insulin Analogues Modified at the B26 Site Reveal a Hormone Conformation that is Undetected in the Receptor Complex
Acta Crystallogr.,Sect.D, 70, 2014
4UNT
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BU of 4unt by Molmil
Induced monomer of the Mcg variable domain
Descriptor: IG LAMBDA CHAIN V-II REGION MGC, SULFATE ION
Authors:Brumshtein, B, Esswein, S.R, Landau, M, Ryan, C.M, Whitelegge, J.P, Phillips, M.L, Cascio, D, Sawaya, M.R, Eisenberg, D.S.
Deposit date:2014-05-30
Release date:2014-08-27
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Formation of Amyloid Fibers by Monomeric Light-Chain Variable Domains.
J.Biol.Chem., 289, 2014
4V4B
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BU of 4v4b by Molmil
Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map.
Descriptor: 18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S11, ...
Authors:Spahn, C.M, Gomez-Lorenzo, M.G, Grassucci, R.A, Jorgensen, R, Andersen, G.R, Beckmann, R, Penczek, P.A, Ballesta, J.P.G, Frank, J.
Deposit date:2004-01-06
Release date:2014-07-09
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (11.7 Å)
Cite:Domain movements of elongation factor eEF2 and the eukaryotic 80S ribosome facilitate tRNA translocation.
Embo J., 23, 2004
5FN0
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BU of 5fn0 by Molmil
Crystal structure of Pseudomonas fluorescens kynurenine-3- monooxygenase (KMO) in complex with GSK180
Descriptor: 3-(5,6-DICHLORO-2-OXOBENZO[D]OXAZOL-3(2H)-YL)PROPANOIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, KYNURENINE 3-MONOOXYGENASE
Authors:Mole, D.J, Webster, S.P, Uings, I, Zheng, X, Binnie, M, Wilson, K, Hutchinson, J.P, Mirguet, O, Walker, A, Beaufils, B, Ancellin, N, Trottet, L, Beneton, V, Mowat, C.G, Wilkinson, M, Rowland, P, Haslam, C, McBride, A, Homer, N.Z.M, Baily, J.E, Sharp, M.G.F, Garden, O.J, Hughes, J, Howie, S.E.M, Holmes, D, Liddle, J, Iredale, J.P.
Deposit date:2015-11-10
Release date:2016-01-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Kynurenine-3-Monooxygenase Inhibition Prevents Multiple Organ Failure in Rodent Models of Acute Pancreatitis.
Nat.Med. (N.Y.), 22, 2016
1A75
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BU of 1a75 by Molmil
WHITING PARVALBUMIN
Descriptor: CALCIUM ION, PARVALBUMIN
Authors:Declercq, J.P, Baneres, J.L, Rambaud, J, Parello, J.
Deposit date:1998-03-19
Release date:1998-06-17
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Tertiary Structure of a Trp-Containing Parvalbumin from Whiting (Merlangius Merlangus). Description of the Hydrophobic Core
To be Published
8XIA
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BU of 8xia by Molmil
X-RAY ANALYSIS OF D-XYLOSE ISOMERASE AT 1.9 ANGSTROMS: NATIVE ENZYME IN COMPLEX WITH SUBSTRATE AND WITH A MECHANISM-DESIGNED INACTIVATOR
Descriptor: D-xylose, MANGANESE (II) ION, XYLOSE ISOMERASE
Authors:Carrell, H.L, Glusker, J.P.
Deposit date:1990-10-11
Release date:1991-10-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:X-ray analysis of D-xylose isomerase at 1.9 A: native enzyme in complex with substrate and with a mechanism-designed inactivator.
Proc.Natl.Acad.Sci.USA, 86, 1989
9CYC
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BU of 9cyc by Molmil
SARS-CoV-2 PLpro in complex with inhibitor WEHI-P2
Descriptor: (E)-1-[(3R)-1-cyclopentylpiperidin-3-yl]-N-methoxy-1-(6-methoxynaphthalen-2-yl)methanimine, ACETIC ACID, GLYCEROL, ...
Authors:Calleja, D.J, Lechtenberg, B.C, Kuchel, N.W, Devine, S.M, Bader, S.M, Doerflinger, M, Mitchel, J.P, Lessene, G, Komander, D.
Deposit date:2024-08-01
Release date:2025-04-09
Last modified:2025-04-16
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:A novel PLpro inhibitor improves outcomes in a pre-clinical model of long COVID.
Nat Commun, 16, 2025
3TPZ
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BU of 3tpz by Molmil
2.1 Angstrom crystal structure of the L114P mutant of E. Coli KsgA
Descriptor: CHLORIDE ION, PHOSPHATE ION, Ribosomal RNA small subunit methyltransferase A
Authors:Scarsdale, J.N, Musayev, F.N, Rife, J.P.
Deposit date:2011-09-08
Release date:2012-02-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Control of Substrate Specificity by a Single Active Site Residue of the KsgA Methyltransferase.
Biochemistry, 51, 2012
8Q0P
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BU of 8q0p by Molmil
Crystal Structure of an N-terminal Domain of Variant Surface Glycoprotein 21 (VSG21) of Trypanosome brucei brucei Lister 427
Descriptor: Variant surface glycoprotein MITat 1.21
Authors:Zeelen, J.P, Stebbins, C.E.
Deposit date:2023-07-28
Release date:2023-09-13
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:A structural classification of the variant surface glycoproteins of the African trypanosomey.
Plos Negl Trop Dis, 17, 2023
9CYB
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BU of 9cyb by Molmil
SARS-CoV-2 PLpro in complex with inhibitor WEHI-P1
Descriptor: Papain-like protease, SUCCINIC ACID, [(3R)-1-cyclopentylpiperidin-3-yl](6-methoxynaphthalen-2-yl)methanone
Authors:Calleja, D.J, Lechtenberg, B.C, Kuchel, N.W, Devine, S.M, Bader, S.M, Doerflinger, M, Mitchell, J.P, Lessene, G, Komander, D.
Deposit date:2024-08-01
Release date:2025-04-09
Last modified:2025-04-16
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:A novel PLpro inhibitor improves outcomes in a pre-clinical model of long COVID.
Nat Commun, 16, 2025
9CYK
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BU of 9cyk by Molmil
SARS-CoV-2 PLpro in complex with inhibitor WEHI-P24
Descriptor: ACETIC ACID, GLYCEROL, Papain-like protease, ...
Authors:Calleja, D.J, Lechtenberg, B.C, Kuchel, N.W, Devine, S.M, Bader, S.M, Doerflinger, M, Mitchell, J.P, Lessene, G, Komander, D.
Deposit date:2024-08-02
Release date:2025-04-09
Last modified:2025-04-16
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:A novel PLpro inhibitor improves outcomes in a pre-clinical model of long COVID.
Nat Commun, 16, 2025
9CYD
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BU of 9cyd by Molmil
SARS-CoV-2 PLpro in complex with inhibitor WEHI-P4
Descriptor: (1S,4s)-4-{(3R)-3-[(E)-(methoxyimino)(6-methoxynaphthalen-2-yl)methyl]piperidin-1-yl}cyclohexan-1-ol, CHLORIDE ION, Papain-like protease, ...
Authors:Calleja, D.J, Lechtenberg, B.C, Kuchel, N.W, Devine, S.M, Bader, S.M, Doerflinger, M, Mitchell, J.P, Lessene, G, Komander, D.
Deposit date:2024-08-02
Release date:2025-04-09
Last modified:2025-04-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A novel PLpro inhibitor improves outcomes in a pre-clinical model of long COVID.
Nat Commun, 16, 2025
3B8E
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BU of 3b8e by Molmil
Crystal structure of the sodium-potassium pump
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, MAGNESIUM ION, Na+/K+ ATPase gamma subunit transcript variant a, ...
Authors:Morth, J.P, Pedersen, P.B, Toustrup-Jensen, M.S, Soerensen, T.L.M, Petersen, J, Andersen, J.P, Vilsen, B, Nissen, P.
Deposit date:2007-11-01
Release date:2007-12-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structure of the sodium-potassium pump.
Nature, 450, 2007
4D65
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BU of 4d65 by Molmil
Structure of porin Omp-Pst2 from P. stuartii; the asymmetric unit contains a dimer of trimers.
Descriptor: 3-HYDROXY-TETRADECANOIC ACID, LAURYL DIMETHYLAMINE-N-OXIDE, MYRISTIC ACID, ...
Authors:Nasrallah, C, Colletier, J.P.
Deposit date:2014-11-08
Release date:2016-03-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Porin self-association enables cell-to-cell contact inProvidencia stuartiifloating communities.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4DGH
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BU of 4dgh by Molmil
Structure of SulP Transporter STAS Domain from Vibrio Cholerae Refined to 1.9 Angstrom Resolution
Descriptor: GLYCEROL, IODIDE ION, POTASSIUM ION, ...
Authors:Keller, J.P, Chang, C, Marshall, N, Bearden, J, Dallos, P, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-01-25
Release date:2012-02-08
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of SulP Transporter STAS Domain from Vibrio Cholerae Refined to 1.9 Angstrom Resolution
To be Published
4DOK
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BU of 4dok by Molmil
Crystal structure of Arabidopsis thaliana chalcone-isomerase like protein At5g05270 (AtCHIL)
Descriptor: ACETATE ION, CALCIUM ION, Similarity to chalcone-flavonone isomerase
Authors:Noel, J.P, Louie, G.V, Bowman, M.E.
Deposit date:2012-02-09
Release date:2012-05-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Evolution of the chalcone-isomerase fold from fatty-acid binding to stereospecific catalysis.
Nature, 485, 2012

235183

數據於2025-04-23公開中

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