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PDB: 5623 results

2UXE
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The structure of Vaccinia virus N1
Descriptor: HYPOTHETICAL PROTEIN
Authors:Cooray, S, Bahar, M.W, Abrescia, N.G.A, McVey, C.E, Bartlett, N.W, Chen, R.A.-J, Stuart, D.I, Grimes, J.M, Smith, G.L.
Deposit date:2007-03-28
Release date:2007-05-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Functional and Structural Studies of the Vaccinia Virus Virulence Factor N1 Reveal a Bcl-2-Like Anti- Apoptotic Protein
J.Gen.Virol., 88, 2007
4HUP
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Structure of ricin A chain bound with N-(N-(pterin-7-yl)carbonylglycyl)-L-phenylalanyl)-L-phenylalanine
Descriptor: (2S)-2-[[(2S)-2-[2-[(2-azanyl-4-oxidanylidene-1H-pteridin-7-yl)carbonylamino]ethanoylamino]-3-phenyl-propanoyl]amino]-3-phenyl-propanoic acid, MALONIC ACID, Ricin, ...
Authors:Jasheway, K.R, Monzingo, A.F, Saito, R, Pruet, J.M, Manzano, L.A, Wiget, P.A, Anslyn, E.V, Robertus, J.D.
Deposit date:2012-11-02
Release date:2012-12-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.699 Å)
Cite:Peptide-conjugated pterins as inhibitors of ricin toxin A.
J.Med.Chem., 56, 2013
2V12
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Crystal Structure of Renin with Inhibitor 8
Descriptor: N-[(2S,4S,5S,7R)-4-AMINO-8-(BUTYLAMINO)-5-HYDROXY-7-METHYL-2-(1-METHYLETHYL)-8-OXOOCTYL]-2-(3-METHOXYPROPOXY)BENZAMIDE, RENIN
Authors:Rahuel, J, Rasetti, V, Maibaum, J, Rueger, H, Goschke, R, Cohen, N.C, Stutz, S, Cumin, F, Fuhrer, W, Wood, J.M, Grutter, M.G.
Deposit date:2007-05-21
Release date:2007-07-03
Last modified:2019-04-03
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure-Based Drug Design: The Discovery of Novel Nonpeptide Orally Active Inhibitors of Human Renin
Chem.Biol., 7, 2000
2V3Z
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Glu383Ala Escherichia coli aminopeptidase P in complex with substrate
Descriptor: CHLORIDE ION, MANGANESE (II) ION, TRIPEPTIDE (VALINE-PROLINE-LEUCINE), ...
Authors:Graham, S.C, Guss, J.M.
Deposit date:2007-06-25
Release date:2007-11-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Complexes of Mutants of Escherichia Coli Aminopeptidase P and the Tripeptide Substrate Valproleu.
Arch.Biochem.Biophys., 469, 2008
4HV7
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Structure of ricin A chain bound with N-(N-(pterin-7-yl)carbonylglycyl)glycine
Descriptor: 2-[2-[(2-azanyl-4-oxidanylidene-1H-pteridin-7-yl)carbonylamino]ethanoylamino]ethanoic acid, MALONIC ACID, Ricin, ...
Authors:Jasheway, K.R, Monzingo, A.F, Saito, R, Pruet, J.M, Manzano, L.A, Wiget, P.A, Anslyn, E.V, Robertus, J.D.
Deposit date:2012-11-05
Release date:2012-12-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.869 Å)
Cite:Peptide-conjugated pterins as inhibitors of ricin toxin A.
J.Med.Chem., 56, 2013
6FD2
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Radical SAM 1,2-diol dehydratase AprD4 in complex with its substrate paromamine
Descriptor: 5'-DEOXYADENOSINE, IRON/SULFUR CLUSTER, METHIONINE, ...
Authors:Liu, W.Q, Amara, P, Mouesca, J.M, Ji, X, Renoux, O, Martin, L, Zhang, C, Zhang, Q, Nicolet, Y.
Deposit date:2017-12-21
Release date:2018-01-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:1,2-Diol Dehydration by the Radical SAM Enzyme AprD4: A Matter of Proton Circulation and Substrate Flexibility.
J. Am. Chem. Soc., 140, 2018
2VHC
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P4 PROTEIN FROM BACTERIOPHAGE PHI12 N234G mutant in complex with AMPCPP and MN
Descriptor: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MANGANESE (II) ION, NTPASE P4
Authors:Kainov, D.E, Mancini, E.J, Telenius, J, Lisal, J, Grimes, J.M, Bamford, D.H, Stuart, D.I, Tuma, R.
Deposit date:2007-11-20
Release date:2007-12-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural Basis of Mechanochemical Coupling in a Hexameric Molecular Motor.
J.Biol.Chem., 283, 2008
6F62
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Crystal structure of the SYCP1 N-terminal head-to-head assembly in open conformation
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Synaptonemal complex protein 1
Authors:Dunce, J.M, Davies, O.R.
Deposit date:2017-12-04
Release date:2018-06-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.066 Å)
Cite:Structural basis of meiotic chromosome synapsis through SYCP1 self-assembly.
Nat. Struct. Mol. Biol., 25, 2018
2V3X
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His243Ala Escherichia coli aminopeptidase P in complex with substrate
Descriptor: CHLORIDE ION, MANGANESE (II) ION, TRIPEPTIDE (VALINE-PROLINE-LEUCINE), ...
Authors:Graham, S.C, Guss, J.M.
Deposit date:2007-06-25
Release date:2007-11-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Complexes of Mutants of Escherichia Coli Aminopeptidase P and the Tripeptide Substrate Valproleu.
Arch.Biochem.Biophys., 469, 2008
2V1Y
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Structure of a phosphoinositide 3-kinase alpha adaptor-binding domain (ABD) in a complex with the iSH2 domain from p85 alpha
Descriptor: PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT ALPHA, PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE 3-KINASE CATALYTIC SUBUNIT ALPHA ISOFORM
Authors:Miled, N, Yan, Y, Hon, W.C, Perisic, O, Zvelebil, M, Inbar, Y, Schneidman-Duhovny, D, Wolfson, H.J, Backer, J.M, Williams, R.L.
Deposit date:2007-05-30
Release date:2007-07-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Mechanism of Two Classes of Cancer Mutations in the Phosphoinositide 3-Kinase Catalytic Subunit.
Science, 317, 2007
6EVS
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BU of 6evs by Molmil
Characterization of 2-deoxyribosyltransferase from psychrotolerant bacterium Bacillus psychrosaccharolyticus: a suitable biocatalyst for the industrial synthesis of antiviral and antitumoral nucleosides
Descriptor: N-deoxyribosyltransferase
Authors:Fresco-Tabohada, A, Fernandez-Lucas, J, Acebal, C, Arroyo, M, Ramon, F, Mancheno, J.M, de la Mata, I.
Deposit date:2017-11-02
Release date:2018-11-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:2'-Deoxyribosyltransferase from Bacillus psychrosaccharolyticus: A Mesophilic-Like Biocatalyst for the Synthesis of Modified Nucleosides from a Psychrotolerant Bacterium
Catalysts, 2019
2W3Z
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BU of 2w3z by Molmil
Structure of a Streptococcus mutans CE4 esterase
Descriptor: PHOSPHATE ION, PUTATIVE DEACETYLASE, ZINC ION
Authors:Deng, D.M, Urch, J.E, ten Cate, J.M, Rao, V.A, van Aalten, D.M.F, Crielaard, W.
Deposit date:2008-11-17
Release date:2008-12-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Streptococcus Mutans Smu.623C Codes for a Functional, Metal Dependent Polysaccharide Deacetylase that Modulates Interactions with Salivary Agglutinin.
J.Bacteriol., 191, 2009
4HJK
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U7Ub7 Disulfide variant
Descriptor: PHOSPHATE ION, Ubiquitin
Authors:Murray, J.M, Rouge, L.
Deposit date:2012-10-12
Release date:2012-11-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.784 Å)
Cite:Potent and selective inhibitors of USP7/HAUSP activity by protein conformational stabilization
to be published
2WLZ
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Chitinase A from Serratia marcescens ATCC990 in complex with Chitobio- thiazoline.
Descriptor: 1,4-DIETHYLENE DIOXIDE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 3AR,5R,6S,7R,7AR-5-HYDROXYMETHYL-2-METHYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-DIOL, ...
Authors:Taylor, E.J, Dennis, R.J, Macdonald, J.M, Tarling, C.A, Knapp, S, Withers, S.G, Davies, G.J.
Deposit date:2009-06-29
Release date:2010-03-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Chitinase Inhibition by Chitobiose and Chitotriose Thiazolines.
Angew.Chem.Int.Ed.Engl., 49, 2010
6F5O
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A mechanism for the activation of the influenza virus transcriptase
Descriptor: 3' promoter vRNA, 5' promoter vRNA, Polymerase acidic protein, ...
Authors:Serna Martin, I, Grimes, J.M.
Deposit date:2017-12-02
Release date:2018-06-27
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (9.8 Å)
Cite:A Mechanism for the Activation of the Influenza Virus Transcriptase.
Mol. Cell, 70, 2018
2WO8
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MMP12 complex with a beta hydroxy carboxylic acid
Descriptor: (3S)-5-biphenyl-4-yl-3-hydroxypentanoic acid, CALCIUM ION, GLYCEROL, ...
Authors:Holmes, I.P, Gaines, S, Watson, S.P, Lorthioir, O, Walker, A, Baddeley, S.J, Herbert, S, Egan, D, Convery, M.A, Singh, O.M.P, Gross, J.W, Strelow, J.M, Smith, R.H, Amour, A.J, Brown, D, Martin, S.L.
Deposit date:2009-07-22
Release date:2009-09-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Identification of Beta-Hydroxy Carboxylic Acids as Selective Mmp-12 Inhibitors.
Bioorg.Med.Chem.Lett., 19, 2009
2X6A
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BU of 2x6a by Molmil
Potassium Channel from Magnetospirillum Magnetotacticum
Descriptor: ATP-SENSITIVE INWARD RECTIFIER POTASSIUM CHANNEL 10, PHOSPHOCHOLINE, POTASSIUM ION
Authors:Clarke, O.B, Caputo, A.T, Hill, A.P, Vandenberg, J.I, Smith, B.J, Gulbis, J.M.
Deposit date:2010-02-15
Release date:2010-06-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Domain Reorientation and Rotation of an Intracellular Assembly Regulate Conduction in Kir Potassium Channels.
Cell(Cambridge,Mass.), 141, 2010
6EYO
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Structure of extended IgE-Fc in complex with two anti-IgE Fabs
Descriptor: 8D6 Fab heavy chain, 8D6 Fab light chain, Immunoglobulin heavy constant epsilon, ...
Authors:Chen, J.B, Ramadani, F, Pang, M.O.Y, Beavil, R.L, Holdom, M.D, Mitropoulou, A.N, Beavil, A.J, Gould, H.J, Chang, T.W, Sutton, B.J, McDonnell, J.M, Davies, A.M.
Deposit date:2017-11-13
Release date:2018-08-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structural basis for selective inhibition of immunoglobulin E-receptor interactions by an anti-IgE antibody.
Sci Rep, 8, 2018
4I1K
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BU of 4i1k by Molmil
Crystal Structure of VRN1 (Residues 208-341)
Descriptor: B3 domain-containing transcription factor VRN1, CHLORIDE ION
Authors:King, G, Chanson, A.H, McCallum, E.J, Ohme-Takagi, M, Byriel, K, Hill, J.M, Martin, J.L, Mylne, J.S.
Deposit date:2012-11-21
Release date:2012-12-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Arabidopsis B3 Domain Protein VERNALIZATION1 (VRN1) Is Involved in Processes Essential for Development, with Structural and Mutational Studies Revealing Its DNA-binding Surface.
J.Biol.Chem., 288, 2013
6F64
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Crystal structure of the SYCP1 C-terminal back-to-back assembly
Descriptor: ACETATE ION, Synaptonemal complex protein 1
Authors:Dunce, J.M, Millan, C, Uson, I, Davies, O.R.
Deposit date:2017-12-04
Release date:2018-06-06
Last modified:2020-04-22
Method:X-RAY DIFFRACTION (2.493 Å)
Cite:Structural basis of meiotic chromosome synapsis through SYCP1 self-assembly.
Nat. Struct. Mol. Biol., 25, 2018
2WC4
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Structure of family 1 beta-glucosidase from Thermotoga maritima in complex with 3-imino-2-thia-(+)-castanospermine
Descriptor: (3Z,5S,6R,7S,8R,8aS)-3-(octylimino)hexahydro[1,3]thiazolo[3,4-a]pyridine-5,6,7,8-tetrol, 1,2-ETHANEDIOL, ACETATE ION, ...
Authors:Aguilar, M, Gloster, T.M, Turkenburg, J.P, Garcia-Moreno, M.I, Ortiz Mellet, C, Davies, G.J, Garcia Fernandez, J.M.
Deposit date:2009-03-08
Release date:2009-04-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Glycosidase Inhibition by Ring-Modified Castanospermine Analogues: Tackling Enzyme Selectivity by Inhibitor Tailoring.
Org.Biomol.Chem., 7, 2009
6EYN
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BU of 6eyn by Molmil
Structure of the 8D6 (anti-IgE) Fab
Descriptor: 1,2-ETHANEDIOL, 8D6 Fab heavy chain, 8D6 Fab light chain, ...
Authors:Chen, J.B, Ramadani, F, Pang, M.O.Y, Beavil, R.L, Holdom, M.D, Mitropoulou, A.N, Beavil, A.J, Gould, H.J, Chang, T.W, Sutton, B.J, McDonnell, J.M, Davies, A.M.
Deposit date:2017-11-13
Release date:2018-08-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for selective inhibition of immunoglobulin E-receptor interactions by an anti-IgE antibody.
Sci Rep, 8, 2018
2WD1
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Human c-Met Kinase in complex with azaindole inhibitor
Descriptor: 1-[(2-NITROPHENYL)SULFONYL]-1H-PYRROLO[3,2-B]PYRIDINE-6-CARBOXAMIDE, GAMMA-BUTYROLACTONE, HEPATOCYTE GROWTH FACTOR RECEPTOR
Authors:Porter, J, Lumb, S, Franklin, R.J, Gascon-Simorte, J.M, Calmiano, M, Le Riche, K, Lallemand, B, Keyaerts, J, Edwards, H, Maloney, A, Delgado, J, King, L, Foley, A, Lecomte, F, Reuberson, J, Meier, C, Batchelor, M.
Deposit date:2009-03-19
Release date:2009-04-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of 4-Azaindoles as Novel Inhibitors of C- met Kinase.
Bioorg.Med.Chem.Lett., 19, 2009
6F5P
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A mechanism for the activation of the influenza virus transcriptase
Descriptor: ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA, DNA-directed RNA polymerase subunit, MAGNESIUM ION, ...
Authors:Serna Martin, I, Grimes, J.M.
Deposit date:2017-12-02
Release date:2018-09-19
Method:X-RAY DIFFRACTION (4.14 Å)
Cite:A Mechanism for the Activation of the Influenza Virus Transcriptase.
Mol. Cell, 70, 2018
2W0U
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CRYSTAL STRUCTURE OF HUMAN GLYCOLATE OXIDASE IN COMPLEX WITH THE INHIBITOR 5-[(4-CHLOROPHENYL)SULFANYL]- 1,2,3-THIADIAZOLE-4-CARBOXYLATE.
Descriptor: 5-[(4-chlorophenyl)sulfanyl]-1,2,3-thiadiazole-4-carboxylate, FLAVIN MONONUCLEOTIDE, HYDROXYACID OXIDASE 1
Authors:Bourhis, J.M, Lindqvist, Y.
Deposit date:2008-10-10
Release date:2009-11-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Structure of Human Glycolate Oxidase in Complex with the Inhibitor 4-Carboxy-5-[(4-Chlorophenyl)Sulfanyl]-1,2,3-Thiadiazole.
Acta Crystallogr.,Sect.F, 65, 2009

223790

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