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PDB: 5623 件

4K8I
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Crystal Structure of Staphylococcal Nuclease mutant I92V/V99L
分子名称: Thermonuclease
著者Sanders, J.M, Latimer, E.C, Roeser, J.R, Janowska, K, Sakon, J, Stites, W.E.
登録日2013-04-18
公開日2013-05-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Hydrophobic core mutants of Staphylococcal nuclease
To be Published
4KSE
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Crystal structure of a HIV p51 (219-230) deletion mutant
分子名称: 1,2-ETHANEDIOL, HIV p51 subunit
著者Zheng, X, Mueller, G.A, Derose, E.F, Pedersen, L.C, Gabel, S.A, Cuneo, M.J, Krahn, J.M, London, R.E.
登録日2013-05-17
公開日2014-08-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.677 Å)
主引用文献Selective unfolding of one Ribonuclease H domain of HIV reverse transcriptase is linked to homodimer formation.
Nucleic Acids Res., 42, 2014
4KRI
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Haemonchus contortus Phospholethanolamine N-methyltransferase 2 in complex with phosphomonomethylethanolamine and S-adenosylhomocysteine
分子名称: 2-(methylamino)ethyl dihydrogen phosphate, Phospholethanolamine N-methyltransferase 2, S-ADENOSYL-L-HOMOCYSTEINE
著者Lee, S.G, Jez, J.M.
登録日2013-05-16
公開日2013-09-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Evolution of structure and mechanistic divergence in di-domain methyltransferases from nematode phosphocholine biosynthesis.
Structure, 21, 2013
4K2F
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Structure of Pseudomonas aeruginosa PvdQ bound to BRD-A08522488
分子名称: (2S)-(4-chlorophenyl)(6-chloropyridin-2-yl)ethanenitrile, 1,2-ETHANEDIOL, Acyl-homoserine lactone acylase PvdQ
著者Drake, E.J, Wurst, J.M, Theriault, J.R, Munoz, B, Gulick, A.M.
登録日2013-04-09
公開日2014-06-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Identification of Inhibitors of PvdQ, an Enzyme Involved in the Synthesis of the Siderophore Pyoverdine.
Acs Chem.Biol., 9, 2014
4KRG
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SeMet Haemonchus contortus Phosphoethanolamine N-methyltransferase 1 in complex with phosphoethanolamine and S-adenosylhomocysteine
分子名称: PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER, Phosphoethanolamine N-methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Lee, S.G, Jez, J.M.
登録日2013-05-16
公開日2013-09-25
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Evolution of structure and mechanistic divergence in di-domain methyltransferases from nematode phosphocholine biosynthesis.
Structure, 21, 2013
4KRH
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SeMet Haemonchus contortus Phosphoethanolamine N-methyltransferase 2 in complex with S-adenosyl-L-methionine
分子名称: Phosphoethanolamine N-methyltransferase 2, S-ADENOSYLMETHIONINE
著者Lee, S.G, Jez, J.M.
登録日2013-05-16
公開日2013-09-25
最終更新日2013-10-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Evolution of structure and mechanistic divergence in di-domain methyltransferases from nematode phosphocholine biosynthesis.
Structure, 21, 2013
8BS7
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Multimerisation domain of Borna disease virus 1
分子名称: Phosphoprotein
著者Whitehead, J.D, Grimes, J.M, Keown, J.R.
登録日2022-11-24
公開日2023-04-05
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural and biophysical characterization of the Borna disease virus 1 phosphoprotein.
Acta Crystallogr.,Sect.F, 79, 2023
8B4H
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IstA transposase cleaved donor complex
分子名称: DNA (55-MER) / right IS21 transposon end (insertion sequence IS5376), DNA (57-MER) / right IS21 transposon end (insertion sequence IS5376), MAGNESIUM ION, ...
著者Spinola-Amilibia, M, de la Gandara, A, Araujo-Bazan, L, Berger, J.M, Arias-Palomo, E.
登録日2022-09-20
公開日2023-05-03
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献IS21 family transposase cleaved donor complex traps two right-handed superhelical crossings.
Nat Commun, 14, 2023
8BVP
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Crystal structure of an N-terminal fragment of the effector protein Lpg2504 (SidI) from Legionella pneumophila
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Restriction endonuclease
著者Machtens, D.A, Willerding, J.M, Eschenburg, S, Reubold, T.F.
登録日2022-12-05
公開日2023-05-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the N-terminal domain of the effector protein SidI of Legionella pneumophila reveals a glucosyl transferase domain.
Biochem.Biophys.Res.Commun., 661, 2023
8BWY
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In situ outer dynein arm from Chlamydomonas reinhardtii in a pre-power stroke state
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Calmodulin, ...
著者Zimmermann, N.E.L, Noga, A, Obbineni, J.M, Ishikawa, T.
登録日2022-12-07
公開日2023-05-10
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (38 Å)
主引用文献ATP-induced conformational change of axonemal outer dynein arms revealed by cryo-electron tomography.
Embo J., 42, 2023
8BX8
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In situ outer dynein arm from Chlamydomonas reinhardtii in the post-power stroke state
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Dynein heavy chain, ...
著者Zimmermann, N.E.L, Noga, A, Obbineni, J.M, Ishikawa, T.
登録日2022-12-08
公開日2023-05-10
最終更新日2023-06-28
実験手法ELECTRON MICROSCOPY (30.299999 Å)
主引用文献ATP-induced conformational change of axonemal outer dynein arms revealed by cryo-electron tomography.
Embo J., 42, 2023
8BCK
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Recombinant Tipula oleracea Nudivirus polyhedrin
分子名称: CALCIUM ION, MOBP
著者Keown, J.R, Grimes, J.M.
登録日2022-10-16
公開日2023-07-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Atomic structure of a nudivirus occlusion body protein determined from a 70-year-old crystal sample.
Nat Commun, 14, 2023
8BC5
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Recombinant Tipula oleracea Nudivirus Polyhedrin - Selenomethionine
分子名称: CALCIUM ION, MOBP
著者Keown, J.R, Grimes, J.M.
登録日2022-10-15
公開日2023-07-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Atomic structure of a nudivirus occlusion body protein determined from a 70-year-old crystal sample.
Nat Commun, 14, 2023
8BBT
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Native Tipula oleracea Nudivirus polyhedrin - 1960
分子名称: CALCIUM ION, MOBP
著者Keown, J.R, Grimes, J.M.
登録日2022-10-14
公開日2023-07-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Atomic structure of a nudivirus occlusion body protein determined from a 70-year-old crystal sample.
Nat Commun, 14, 2023
8BCL
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Recombinant Tipula oleracea Nudivirus polyhedrin Expanded unit cell
分子名称: MOBP
著者Keown, J.R, Grimes, J.M.
登録日2022-10-16
公開日2023-07-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Atomic structure of a nudivirus occlusion body protein determined from a 70-year-old crystal sample.
Nat Commun, 14, 2023
8BJW
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BU of 8bjw by Molmil
Structure of Tupaia Paramyxovirus C protein
分子名称: DI(HYDROXYETHYL)ETHER, Protein C
著者Bourhis, J.M, Jamin, M.
登録日2022-11-08
公開日2023-08-30
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Orthoparamyxovirinae C Proteins Have a Common Origin and a Common Structural Organization.
Biomolecules, 13, 2023
8SMR
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BU of 8smr by Molmil
cytochrome bc1-cbb3 supercomplex from Pseudomonas aeruginosa
分子名称: (2R)-2-(methoxymethyl)-4-{[(25R)-spirost-5-en-3beta-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside, CALCIUM ION, COPPER (II) ION, ...
著者Di Trani, J.M, Rubinstein, J.L.
登録日2023-04-26
公開日2023-10-11
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structure of the bc 1 - cbb 3 respiratory supercomplex from Pseudomonas aeruginosa.
Proc.Natl.Acad.Sci.USA, 120, 2023
8SNH
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cytochrome bc1-cbb3 supercomplex from Pseudomonas aeruginosa
分子名称: (2R)-2-(methoxymethyl)-4-{[(25R)-spirost-5-en-3beta-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside, CALCIUM ION, COPPER (II) ION, ...
著者Di Trani, J.M, Rubinstein, J.L.
登録日2023-04-27
公開日2023-10-11
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structure of the bc 1 - cbb 3 respiratory supercomplex from Pseudomonas aeruginosa.
Proc.Natl.Acad.Sci.USA, 120, 2023
8SWZ
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PARP4 ART domain bound to EB47
分子名称: 2-[4-[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]carbonylpiperazin-1-yl]-N-(1-oxidanylidene-2,3-dihydroisoindol-4-yl)ethanamide, GLYCEROL, Protein mono-ADP-ribosyltransferase PARP4
著者Frigon, L, Pascal, J.M.
登録日2023-05-19
公開日2023-11-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural and biochemical analysis of the PARP1-homology region of PARP4/vault PARP.
Nucleic Acids Res., 51, 2023
8SX1
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PARP4 catalytic domain
分子名称: Protein mono-ADP-ribosyltransferase PARP4
著者Frigon, L, Pascal, J.M.
登録日2023-05-19
公開日2023-11-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Structural and biochemical analysis of the PARP1-homology region of PARP4/vault PARP.
Nucleic Acids Res., 51, 2023
8SX2
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PARP4 catalytic domain bound to EB47
分子名称: 2-[4-[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]carbonylpiperazin-1-yl]-N-(1-oxidanylidene-2,3-dihydroisoindol-4-yl)ethanamide, Protein mono-ADP-ribosyltransferase PARP4
著者Frigon, L, Pascal, J.M.
登録日2023-05-19
公開日2023-11-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structural and biochemical analysis of the PARP1-homology region of PARP4/vault PARP.
Nucleic Acids Res., 51, 2023
8SWY
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PARP4 ART domain bound to NADH
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, GLYCEROL, Protein mono-ADP-ribosyltransferase PARP4
著者Frigon, L, Pascal, J.M.
登録日2023-05-19
公開日2023-11-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural and biochemical analysis of the PARP1-homology region of PARP4/vault PARP.
Nucleic Acids Res., 51, 2023
8SRX
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BU of 8srx by Molmil
Crystal structure of BAK-BAX heterodimer with lysoPC
分子名称: 1,2-ETHANEDIOL, Apoptosis regulator BAX, Bcl-2 homologous antagonist/killer, ...
著者Brouwer, J.M, Czabotar, P.E, Colman, P.M, Miller, M.S.
登録日2023-05-07
公開日2023-12-27
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Sequence differences between BAX and BAK core domains manifest as differences in their interactions with lipids.
Febs J., 291, 2024
8SRY
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Crystal structure of BAK-BAX heterodimer with C12E8
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, 3,6,9,12,15-PENTAOXATRICOSAN-1-OL, ...
著者Brouwer, J.M, Czabotar, P.E, Colman, P.M, Miller, M.S.
登録日2023-05-08
公開日2023-12-27
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Sequence differences between BAX and BAK core domains manifest as differences in their interactions with lipids.
Febs J., 291, 2024
8SKQ
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RNA oligonucleotide containing an alpha-(L)-threofuranosyl nucleic acid (TNA)
分子名称: TNA-containing RNA oligonucleotide
著者Harp, J.M, Egli, M.
登録日2023-04-20
公開日2024-02-14
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Shorter Is Better: The alpha-(l)-Threofuranosyl Nucleic Acid Modification Improves Stability, Potency, Safety, and Ago2 Binding and Mitigates Off-Target Effects of Small Interfering RNAs.
J.Am.Chem.Soc., 145, 2023

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件を2024-08-14に公開中

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