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PDB: 5628 results

2FCH
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BU of 2fch by Molmil
Crystal Structure of Thioredoxin Mutant G74S
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Thioredoxin 1
Authors:Gavira, J.A, Perez-Jimenez, R, Ibarra-Molero, B, Sanchez-Ruiz, J.M.
Deposit date:2005-12-12
Release date:2005-12-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of Thioredoxin Mutant G74S
To be Published
4AU2
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Crystal Structure of a Hsp47-collagen complex
Descriptor: 15ER COLLAGEN MODEL PEPTIDE 15-R8, SERPIN PEPTIDASE INHIBITOR, CLADE H (HEAT SHOCK PROTEIN 47), ...
Authors:Widmer, C, Gebauer, J.M, Brunstein, E, Drogemuller, C, Leeb, T, Baumann, U.
Deposit date:2012-05-13
Release date:2012-08-15
Last modified:2015-04-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular Basis for the Action of the Collagen-Specific Chaperone Hsp47/Serpinh1 and its Structure-Specific Client Recognition.
Proc.Natl.Acad.Sci.USA, 109, 2012
3BS2
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Crystal Structure of Monomine
Descriptor: GLYCEROL, Lipocalin
Authors:Mans, B.J, Ribeiro, J.M, Andersen, J.F.
Deposit date:2007-12-21
Release date:2008-04-01
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structure, function, and evolution of biogenic amine-binding proteins in soft ticks.
J.Biol.Chem., 283, 2008
1PUL
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BU of 1pul by Molmil
Solution structure for the 21KDa caenorhabditis elegans protein CE32E8.3. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET WR33
Descriptor: Hypothetical protein C32E8.3 in chromosome I
Authors:Tejero, R, Aramini, J.M, Swapna, G.V.T, Monleon, D, Chiang, Y, Macapagal, D, Gunsalus, K.C, Kim, S, Szyperski, T, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2003-06-25
Release date:2005-06-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Backbone 1H, 15N and 13C assignments for the 21 kDa Caenorhabditis elegans homologue of "brain-specific" protein.
J.Biomol.Nmr, 28, 2004
1PVG
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BU of 1pvg by Molmil
Crystal Structure of the ATPase region of Saccharomyces Cerevisiae topoisomerase II
Descriptor: DNA topoisomerase II, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Classen, S, Olland, S, Berger, J.M.
Deposit date:2003-06-27
Release date:2003-08-26
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the topoisomerase II ATPase region and its mechanism of inhibition by the chemotherapeutic agent ICRF-187
Proc.Natl.Acad.Sci.USA, 100, 2003
3I11
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Cobalt-substituted metallo-beta-lactamase from Bacillus cereus
Descriptor: Beta-lactamase 2, COBALT (II) ION
Authors:Gonzalez, J.M, Buschiazzo, A, Vila, A.J.
Deposit date:2009-06-25
Release date:2009-12-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Evidence of adaptability in metal coordination geometry and active-site loop conformation among B1 metallo-beta-lactamases .
Biochemistry, 49, 2010
1LF7
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BU of 1lf7 by Molmil
Crystal Structure of Human Complement Protein C8gamma at 1.2 A Resolution
Descriptor: CITRIC ACID, Complement Protein C8gamma
Authors:Ortlund, E, Parker, C.L, Schreck, S.F, Ginell, S, Minor, W, Sodetz, J.M, Lebioda, L.
Deposit date:2002-04-10
Release date:2002-06-12
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of human complement protein C8gamma at 1.2 A resolution reveals a lipocalin fold and a distinct ligand binding site.
Biochemistry, 41, 2002
4B9D
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BU of 4b9d by Molmil
Crystal Structure of Human NIMA-related Kinase 1 (NEK1) with inhibitor.
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, SERINE/THREONINE-PROTEIN KINASE NEK1, ...
Authors:Elkins, J.M, Hanchuk, T.D.M, Lovato, D.V, Basei, F.L, Meirelles, G.V, Kobarg, J, Szklarz, M, Vollmar, M, Mahajan, P, Rellos, P, Zhang, Y, Krojer, T, Pike, A.C.W, Canning, P, von Delft, F, Raynor, J, Bountra, C, Arrowsmith, C, Edwards, A, Knapp, S.
Deposit date:2012-09-04
Release date:2012-09-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:NEK1 kinase domain structure and its dynamic protein interactome after exposure to Cisplatin.
Sci Rep, 7, 2017
4BBL
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BU of 4bbl by Molmil
Cryo-electron microscopy reconstruction of the helical part of influenza A virus ribonucleoprotein isolated from virions.
Descriptor: NUCLEOPROTEIN, RNA
Authors:Arranz, R, Coloma, R, Chichon, F.J, Conesa, J.J, Carrascosa, J.L, Valpuesta, J.M, Ortin, J, Martin-Benito, J.
Deposit date:2012-09-26
Release date:2012-12-05
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (18 Å)
Cite:The Structure of Native Influenza Virion Ribonucleoproteins
Science, 338, 2012
2FMS
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BU of 2fms by Molmil
DNA Polymerase beta with a gapped DNA substrate and dUMPNPP with magnesium in the catalytic site
Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, 5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3', ...
Authors:Batra, V.K, Beard, W.A, Shock, D.D, Krahn, J.M, Pedersen, L.C, Wilson, S.H.
Deposit date:2006-01-09
Release date:2006-04-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Magnesium-induced assembly of a complete DNA polymerase catalytic complex.
Structure, 14, 2006
3ME7
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BU of 3me7 by Molmil
Crystal structure of putative electron transport protein aq_2194 from Aquifex aeolicus VF5
Descriptor: Putative uncharacterized protein, SULFATE ION
Authors:Malashkevich, V.N, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-03-31
Release date:2010-04-14
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of putative electron transport protein aq_2194 from Aquifex aeolicus VF5
To be Published
4C88
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BU of 4c88 by Molmil
Esterase LpEst1 from Lactobacillus plantarum: native structure
Descriptor: ESTERASE
Authors:Alvarez, Y, Esteban-Torres, M, Cortes-Cabrera, A, Gago, F, Acebron, I, Benavente, R, Mardo, K, de-las-Rivas, B, Munoz, R, Mancheno, J.M.
Deposit date:2013-09-30
Release date:2014-04-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Esterase Lpest1 from Lactobacillus Plantarum: A Novel and Atypical Member of the Alpha Beta Hydrolase Superfamily of Enzymes
Plos One, 9, 2014
3Q2B
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BU of 3q2b by Molmil
Crystal Structure of an Actin Depolymerizing Factor
Descriptor: BETA-MERCAPTOETHANOL, Cofilin/actin-depolymerizing factor homolog 1, D(-)-TARTARIC ACID
Authors:Wong, W, Clarke, O.B, Gulbis, J.M, Baum, J.
Deposit date:2010-12-19
Release date:2011-06-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Minimal requirements for actin filament disassembly revealed by structural analysis of malaria parasite actin-depolymerizing factor 1
Proc.Natl.Acad.Sci.USA, 108, 2011
1L6Z
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BU of 1l6z by Molmil
CRYSTAL STRUCTURE OF MURINE CEACAM1A[1,4]: A CORONAVIRUS RECEPTOR AND CELL ADHESION MOLECULE IN THE CEA FAMILY
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, biliary glycoprotein C
Authors:Tan, K, Zelus, B.D, Meijers, R, Liu, J.-H, Bergelson, J.M, Duke, N, Zhang, R, Joachimiak, A, Holmes, K.V, Wang, J.-H.
Deposit date:2002-03-14
Release date:2002-09-14
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.32 Å)
Cite:CRYSTAL STRUCTURE OF MURINE sCEACAM1a[1,4]: A CORONAVIRUS RECEPTOR IN THE CEA FAMILY
Embo J., 21, 2002
3FWU
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BU of 3fwu by Molmil
Crystal structure of Leishmania major MIF1
Descriptor: Macrophage migration inhibitory factor-like protein
Authors:RIchardson, J.M, Walkinshaw, M.D.
Deposit date:2009-01-19
Release date:2009-03-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of Leishmania major orthologues of macrophage migration inhibitory factor
Biochem.Biophys.Res.Commun., 380, 2009
3PI3
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BU of 3pi3 by Molmil
Crystallographic Structure of HbII-oxy from Lucina pectinata at pH 5.0
Descriptor: Hemoglobin II, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Gavira, J.A, Nieves-Marrero, C.A, Ruiz-Martinez, C.R, Estremera-Andujar, R.A, Lopez-Garriga, J, Garcia-Ruiz, J.M.
Deposit date:2010-11-05
Release date:2011-11-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:pH-dependence crystallographic studies of the oxygen carrier hemoglobin II from Lucina pectinata
To be Published
1LRL
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BU of 1lrl by Molmil
Crystal Structure of UDP-Galactose 4-Epimerase Mutant Y299C Complexed with UDP-Glucose
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION, TRIETHYLENE GLYCOL, ...
Authors:Thoden, J.B, Henderson, J.M, Fridovich-Keil, J.L, Holden, H.M.
Deposit date:2002-05-15
Release date:2002-07-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural analysis of the Y299C mutant of Escherichia coli UDP-galactose 4-epimerase. Teaching an old dog new tricks.
J.Biol.Chem., 277, 2002
3CR3
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BU of 3cr3 by Molmil
Structure of a transient complex between Dha-kinase subunits DhaM and DhaL from Lactococcus lactis
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PTS-dependent dihydroxyacetone kinase, ...
Authors:Jeckelmann, J.M, Zurbriggen, A, Christen, S, Baumann, U, Erni, B.
Deposit date:2008-04-04
Release date:2008-10-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray Structures of the Three Lactococcus lactis Dihydroxyacetone Kinase Subunits and of a Transient Intersubunit Complex.
J.Biol.Chem., 283, 2008
3CTA
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BU of 3cta by Molmil
Crystal structure of riboflavin kinase from Thermoplasma acidophilum
Descriptor: Riboflavin kinase
Authors:Bonanno, J.B, Rutter, M, Bain, K.T, Mendoza, M, Romero, R, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-04-11
Release date:2008-04-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of riboflavin kinase from Thermoplasma acidophilum.
To be Published
3CTP
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BU of 3ctp by Molmil
Crystal structure of periplasmic binding protein/LacI transcriptional regulator from Alkaliphilus metalliredigens QYMF complexed with D-xylulofuranose
Descriptor: Periplasmic binding protein/LacI transcriptional regulator, SODIUM ION, beta-D-xylulofuranose
Authors:Malashkevich, V.N, Toro, R, Wasserman, S.R, Meyer, A, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-04-14
Release date:2008-05-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Crystal structure of periplasmic binding protein/LacI transcriptional regulator from Alkaliphilus metalliredigens QYMF complexed with L-xylulose.
To be Published
3PND
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BU of 3pnd by Molmil
FAD binding by ApbE protein from Salmonella enterica: a new class of FAD binding proteins
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, Thiamine biosynthesis lipoprotein ApbE
Authors:Boyd, J.M, Endrizzi, J.A, Hamilton, T.L, Christopherson, M.R, Mulder, D.W, Downs, D.M, Peters, J.W.
Deposit date:2010-11-18
Release date:2011-01-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:FAD binding by ApbE protein from Salmonella enterica: a new class of FAD-binding proteins.
J.Bacteriol., 193, 2011
2FNE
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BU of 2fne by Molmil
The crystal structure of the 13th PDZ domain of MPDZ
Descriptor: Multiple PDZ domain protein
Authors:Papagrigoriou, E, Berridge, G, Johansson, C, Colebrook, S, Salah, E, Burgess, N, Smee, C, Savitsky, P, Bray, J, Schoch, G, Phillips, C, Gileadi, C, Soundarajan, M, Yang, X, Elkins, J.M, Gorrec, F, Turnbull, A, Edwards, A, Arrowsmith, C, Weigelt, J, Sundstrom, M, Doyle, D.A, Structural Genomics Consortium (SGC)
Deposit date:2006-01-11
Release date:2006-01-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structure of PICK1 and other PDZ domains obtained with the help of self-binding C-terminal extensions.
Protein Sci., 16, 2007
1Q2O
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BU of 1q2o by Molmil
Bovine endothelial nitric oxide synthase N368D mutant heme domain dimer with L-N(omega)-nitroarginine-2,4-L-diaminobutyramide bound
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, CACODYLATE ION, ...
Authors:Flinspach, M.L, Li, H, Jamal, J, Yang, W, Huang, H, Hah, J.M, Gomez-Vidal, J.A, Litzinger, E.A, Silverman, R.B, Poulos, T.L.
Deposit date:2003-07-25
Release date:2004-01-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structural basis for dipeptide amide isoform-selective inhibition of neuronal nitric oxide synthase.
Nat.Struct.Mol.Biol., 11, 2004
3MF9
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BU of 3mf9 by Molmil
Computationally designed endo-1,4-beta-xylanase
Descriptor: Endo-1,4-beta-xylanase, SULFATE ION
Authors:Morin, A, Harp, J.M.
Deposit date:2010-04-01
Release date:2010-11-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Computational design of an endo-1,4-{beta}-xylanase ligand binding site.
Protein Eng.Des.Sel., 24, 2011
2FMQ
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Sodium in active site of DNA Polymerase Beta
Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, 5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3', ...
Authors:Batra, V.K, Beard, W.A, Shock, D.D, Krahn, J.M, Pedersen, L.C, Wilson, S.H.
Deposit date:2006-01-09
Release date:2006-04-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Magnesium-induced assembly of a complete DNA polymerase catalytic complex.
Structure, 14, 2006

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PDB entries from 2024-08-28

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