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PDB: 5628 results

6S17
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BU of 6s17 by Molmil
Crystal Structure of DYRK1A with small molecule inhibitor
Descriptor: 1,2-ETHANEDIOL, Dual specificity tyrosine-phosphorylation-regulated kinase 1A, SULFATE ION, ...
Authors:Sorrell, F.J, Henderson, S.H, Redondo, C, Burgess-Brown, N.A, von Delft, F, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Elkins, J.M.
Deposit date:2019-06-18
Release date:2019-06-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Kinase Scaffold Repurposing in the Public Domain
To be published
6S1H
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BU of 6s1h by Molmil
Crystal Structure of DYRK1A with small molecule inhibitor
Descriptor: 1,2-ETHANEDIOL, Dual specificity tyrosine-phosphorylation-regulated kinase 1A, SULFATE ION, ...
Authors:Sorrell, F.J, Henderson, S.H, Redondo, C, Burgess-Brown, N.A, von Delft, F, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Elkins, J.M.
Deposit date:2019-06-18
Release date:2019-06-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Kinase Scaffold Repurposing in the Public Domain
To be published
6UPF
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BU of 6upf by Molmil
Triosephosphate isomerase deficiency: Effect of F240L mutation on enzyme structure
Descriptor: 2-PHOSPHOGLYCOLIC ACID, GLYCEROL, Triosephosphate isomerase
Authors:Romero, J.M.
Deposit date:2019-10-17
Release date:2020-07-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Triosephosphate isomerase deficiency: Effect of F240L mutation on enzyme structure.
Arch.Biochem.Biophys., 689, 2020
1U68
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BU of 1u68 by Molmil
DHNA 7,8 DIHYDRONEOPTERIN COMPLEX
Descriptor: 2-AMINO-7,8-DIHYDRO-6-(1,2,3-TRIHYDROXYPROPYL)-4(1H)-PTERIDINONE, Dihydroneopterin aldolase
Authors:Sanders, W.J, Nienaber, V.L, Lerner, C.G, McCall, J.O, Merrick, S.M, Swanson, S.J, Harlan, J.E, Stoll, V.S, Stamper, G.F, Betz, S.F, Condroski, K.R, Meadows, R.P, Severin, J.M, Walter, K.A, Magdalinos, P, Jakob, C.G, Wagner, R, Beutel, B.A.
Deposit date:2004-07-29
Release date:2004-10-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Discovery of potent inhibitors of dihydroneopterin aldolase using CrystaLEAD high-throughput X-ray crystallographic screening and structure-directed lead optimization.
J.MED.CHEM., 47, 2004
6S1J
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BU of 6s1j by Molmil
Crystal Structure of DYRK1A with small molecule inhibitor
Descriptor: 1,2-ETHANEDIOL, 3-[2-[(3~{S})-3-fluoranylpyrrolidin-1-yl]pyrimidin-4-yl]pyrazolo[1,5-b]pyridazine, DIMETHYL SULFOXIDE, ...
Authors:Sorrell, F.J, Henderson, S.H, Redondo, C, Burgess-Brown, N.A, von Delft, F, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Elkins, J.M.
Deposit date:2019-06-18
Release date:2019-06-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.408 Å)
Cite:Kinase Scaffold Repurposing in the Public Domain
To be published
8R2G
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BU of 8r2g by Molmil
Crystal structure of a BRCA2-DMC1 complex
Descriptor: Breast cancer type 2 susceptibility protein, Meiotic recombination protein DMC1/LIM15 homolog
Authors:Dunce, J.M, Davies, O.R.
Deposit date:2023-11-05
Release date:2023-11-22
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Crystal structure of a BRCA2-DMC1 complex
To Be Published
1UCI
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BU of 1uci by Molmil
Mutants of RNase Sa
Descriptor: Guanyl-specific ribonuclease Sa, SULFATE ION
Authors:Takano, K, Scholtz, J.M, Sacchettini, J.C, Pace, C.N.
Deposit date:2003-04-15
Release date:2003-09-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The contribution of polar group burial to protein stability is strongly context-dependent
J.Biol.Chem., 278, 2003
6S4C
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BU of 6s4c by Molmil
Crystal Structure of the vWFA2 subdomain of type VII collagen
Descriptor: Collagen alpha-1(VII) chain, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Gebauer, J.M, Flachsenberg, F, Baumann, U, Seeger, K.
Deposit date:2019-06-27
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and biophysical characterization of the type VII collagen vWFA2 subdomain leads to identification of two binding sites.
Febs Open Bio, 10, 2020
6UP8
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BU of 6up8 by Molmil
Triosephosphate isomerase deficiency: Effect of F240L mutation on enzyme structure
Descriptor: ISOPROPYL ALCOHOL, Triosephosphate isomerase
Authors:Romero, J.M.
Deposit date:2019-10-16
Release date:2020-07-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Triosephosphate isomerase deficiency: Effect of F240L mutation on enzyme structure.
Arch.Biochem.Biophys., 689, 2020
5QCS
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BU of 5qcs by Molmil
Crystal structure of BACE complex with BMC024
Descriptor: (2R,4S)-N-BUTYL-4-HYDROXY-2-METHYL- 4-((E)-(4AS,12R,15S,17AS)-15-METHYL -14,17-DIOXO-2,3,4,4A,6,9,11,12,13, 14,15,16,17,17A-TETRADECAHYDRO-1H-5 ,10-DITHIA-1,13,16-TRIAZA-BENZOCYCL OPENTADECEN-12-YL)-BUTYRAMIDE, Beta-secretase 1
Authors:Rondeau, J.M, Shao, C, Yang, H, Burley, S.K.
Deposit date:2017-12-01
Release date:2020-06-03
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:D3R grand challenge 4: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies.
J.Comput.Aided Mol.Des., 34, 2020
8QOE
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BU of 8qoe by Molmil
Inward-facing conformation of the ABC transporter BmrA
Descriptor: Multidrug resistance ABC transporter ATP-binding/permease protein BmrA
Authors:Di Cesare, M, Kaplan, E, Valimehr, S, Hanssen, E, Orelle, C, Jault, J.M.
Deposit date:2023-09-28
Release date:2023-12-20
Last modified:2024-01-24
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:The transport activity of the multidrug ABC transporter BmrA does not require a wide separation of the nucleotide-binding domains.
J.Biol.Chem., 300, 2023
5QCW
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BU of 5qcw by Molmil
Crystal structure of BACE complex with BMC021
Descriptor: (2R,4S)-N-butyl-4-[(2S,5S,7R)-2,7-dimethyl-3,15-dioxo-1,4-diazacyclopentadecan-5-yl]-4-hydroxy-2-methylbutanamide, Beta-secretase 1
Authors:Rondeau, J.M, Shao, C, Yang, H, Burley, S.K.
Deposit date:2017-12-01
Release date:2020-06-03
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:D3R grand challenge 4: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies.
J.Comput.Aided Mol.Des., 34, 2020
6RHN
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BU of 6rhn by Molmil
HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN (HINT) FROM RABBIT WITHOUT NUCLEOTIDE
Descriptor: HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN
Authors:Brenner, C, Garrison, P, Gilmour, J, Peisach, D, Ringe, D, Petsko, G.A, Lowenstein, J.M.
Deposit date:1997-02-27
Release date:1997-06-16
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structures of HINT demonstrate that histidine triad proteins are GalT-related nucleotide-binding proteins.
Nat.Struct.Biol., 4, 1997
6S8Y
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BU of 6s8y by Molmil
Crystal structure of cytochrome c in complex with a sulfonated quinoline-derived foldamer
Descriptor: 8-acetamido-2-[[2-[[2-[[2-[[2-[[2-[[2-[(2-carboxy-4-sulfonato-quinolin-8-yl)carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]quinoline-4-sulfonate, ACETATE ION, Cytochrome c iso-1, ...
Authors:Alex, J.M, Corvaglia, V, Hu, X, Engilberge, S, Huc, I, Crowley, P.B.
Deposit date:2019-07-10
Release date:2019-09-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal structure of a protein-aromatic foldamer composite: macromolecular chiral resolution.
Chem.Commun.(Camb.), 55, 2019
5QD7
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BU of 5qd7 by Molmil
Crystal structure of BACE complex with BMC014
Descriptor: (4S)-4-[(1R)-1-hydroxy-2-({1-[3-(1-methylethyl)phenyl]cyclopropyl}amino)ethyl]-19-(methoxymethyl)-11-oxa-3,16-diazatric yclo[15.3.1.1~6,10~]docosa-1(21),6(22),7,9,17,19-hexaen-2-one, Beta-secretase 1
Authors:Rondeau, J.M, Shao, C, Yang, H, Burley, S.K.
Deposit date:2017-12-01
Release date:2020-06-03
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:D3R grand challenge 4: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies.
J.Comput.Aided Mol.Des., 34, 2020
5QCQ
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BU of 5qcq by Molmil
Crystal structure of BACE complex with BMC025
Descriptor: (2R,4S,5S)-N-butyl-4-hydroxy-2,7-dimethyl-5-{[N-(4-methylpentanoyl)-L-methionyl]amino}octanamide, Beta-secretase 1
Authors:Rondeau, J.M, Shao, C, Yang, H, Burley, S.K.
Deposit date:2017-12-01
Release date:2020-06-03
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:D3R grand challenge 4: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies.
J.Comput.Aided Mol.Des., 34, 2020
1TYF
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BU of 1tyf by Molmil
THE STRUCTURE OF CLPP AT 2.3 ANGSTROM RESOLUTION SUGGESTS A MODEL FOR ATP-DEPENDENT PROTEOLYSIS
Descriptor: CLP PEPTIDASE
Authors:Wang, J, Hartling, J.A, Flanagan, J.M.
Deposit date:1997-10-13
Release date:1998-06-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The structure of ClpP at 2.3 A resolution suggests a model for ATP-dependent proteolysis.
Cell(Cambridge,Mass.), 91, 1997
6V2E
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BU of 6v2e by Molmil
Crystal structure of the human CLR:RAMP2 extracellular domain heterodimer with bound high-affinity adrenomedullin S45R/K46L/S48G/Q50W variant
Descriptor: ADM, AMINO GROUP, FORMIC ACID, ...
Authors:Booe, J.M, Pioszak, A.A.
Deposit date:2019-11-22
Release date:2020-08-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Picomolar Affinity Antagonist and Sustained Signaling Agonist Peptide Ligands for the Adrenomedullin and Calcitonin Gene-Related Peptide Receptors.
Acs Pharmacol Transl Sci, 3, 2020
6VCJ
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BU of 6vcj by Molmil
Crystal structure of hsDHFR in complex with NADP+, DAP, and R-naproxen
Descriptor: (2R)-2-(6-methoxynaphthalen-2-yl)propanoic acid, Dihydrofolate reductase, FOLIC ACID, ...
Authors:Pedersen, L.C, London, R.E, Gabel, S.A, Krahn, J.M, DeRose, E.F.
Deposit date:2019-12-21
Release date:2020-10-28
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:The Structural Basis for Nonsteroidal Anti-Inflammatory Drug Inhibition of Human Dihydrofolate Reductase.
J.Med.Chem., 63, 2020
6VE6
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BU of 6ve6 by Molmil
A structural characterization of poly(aspartic acid) hydrolase-1 from Sphingomonas sp. KT-1.
Descriptor: Poly(Aspartic acid) hydrolase-1
Authors:Bolay, A.L, Salvo, H, Brambley, C.A, Yared, T.J, Miller, J.M, Wallen, J.R, Weiland, M.H.
Deposit date:2019-12-28
Release date:2020-12-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.446 Å)
Cite:Structural Characterization of Sphingomonas sp. KT-1 PahZ1-Catalyzed Biodegradation of Thermally Synthesized Poly(aspartic acid)
Acs Sustain Chem Eng, 2020
8RIY
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BU of 8riy by Molmil
Human NUDT5 with ibrutinib derivative
Descriptor: 1-(1-methylpiperidin-4-yl)-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-4-amine, ADP-sugar pyrophosphatase
Authors:Balikci-Akil, E, Elkins, J.M, Huber, K.V.M.
Deposit date:2023-12-19
Release date:2024-05-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.288 Å)
Cite:Unexpected Noncovalent Off-Target Activity of Clinical BTK Inhibitors Leads to Discovery of a Dual NUDT5/14 Antagonist.
J.Med.Chem., 67, 2024
8R1J
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BU of 8r1j by Molmil
Structure of avian H5N1 influenza A polymerase dimer in complex with human ANP32B.
Descriptor: Acidic leucine-rich nuclear phosphoprotein 32 family member B, Polymerase acidic protein, Polymerase basic protein 2, ...
Authors:Carrique, L, Staller, E, Keown, J.R, Fan, H, Fodor, E, Grimes, J.M.
Deposit date:2023-11-02
Release date:2024-05-08
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structures of H5N1 influenza polymerase with ANP32B reveal mechanisms of genome replication and host adaptation.
Nat Commun, 15, 2024
6UP1
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BU of 6up1 by Molmil
Triosephosphate isomerase deficiency: Effect of F240L mutation on enzyme structure
Descriptor: ISOPROPYL ALCOHOL, Triosephosphate isomerase
Authors:Romero, J.M.
Deposit date:2019-10-16
Release date:2020-07-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Triosephosphate isomerase deficiency: Effect of F240L mutation on enzyme structure.
Arch.Biochem.Biophys., 689, 2020
6UP5
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BU of 6up5 by Molmil
Triosephosphate isomerase deficiency: Effect of F240L mutation on enzyme structure
Descriptor: 2-PHOSPHOGLYCOLIC ACID, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Romero, J.M.
Deposit date:2019-10-16
Release date:2020-07-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Triosephosphate isomerase deficiency: Effect of F240L mutation on enzyme structure.
Arch.Biochem.Biophys., 689, 2020
6SKF
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BU of 6skf by Molmil
Cryo-EM Structure of T. kodakarensis 70S ribosome
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Matzov, D, Sas-Chen, A, Thomas, J.M, Santangelo, T, Meier, J.L, Schwartz, S, Shalev-Benami, M.
Deposit date:2019-08-15
Release date:2020-07-29
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Dynamic RNA acetylation revealed by quantitative cross-evolutionary mapping.
Nature, 583, 2020

224201

數據於2024-08-28公開中

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