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PDB: 5628 results

4CKY
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BU of 4cky by Molmil
Structure of the Mycobacterium tuberculosis Type II Dehydroquinase inhibited by a 3-dehydroquinic acid derivative
Descriptor: 2,2-dimethyl-3-dehydroquinic acid, 3-DEHYDROQUINATE DEHYDRATASE, SODIUM ION, ...
Authors:Otero, J.M, Llamas-Saiz, A.L, Maneiro, M, Peon, A, Sedes, A, Lamb, H, Hawkins, A.R, Gonzalez-Bello, C, van Raaij, M.J.
Deposit date:2014-01-10
Release date:2015-03-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Investigation of the Dehydratation Mechanism Catalyzed by the Type II Dehydroquinase
To be Published
1O25
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BU of 1o25 by Molmil
Crystal structure of Thymidylate Synthase Complementing Protein (TM0449) from Thermotoga maritima with dUMP at 2.4 A resolution
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Thymidylate synthase thyX
Authors:Mathews, I.I, Deacon, A.M, Canaves, J.M, McMullan, D, Lesley, S.A, Agarwalla, S, Kuhn, P, Joint Center for Structural Genomics (JCSG)
Deposit date:2003-02-20
Release date:2003-06-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Functional Analysis of Substrate and Cofactor Complex Structures of a Thymidylate Synthase-Complementing Protein
Structure, 11, 2003
3EC2
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BU of 3ec2 by Molmil
Crystal structure of the DnaC helicase loader
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA replication protein DnaC, MAGNESIUM ION
Authors:Mott, M.L, Erzberger, J.P, Coons, M.M, Berger, J.M.
Deposit date:2008-08-28
Release date:2008-11-25
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural synergy and molecular crosstalk between bacterial helicase loaders and replication initiators.
Cell(Cambridge,Mass.), 135, 2008
3R3E
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BU of 3r3e by Molmil
The glutathione bound structure of YqjG, a glutathione transferase homolog from Escherichia coli K-12
Descriptor: GLUTATHIONE, SULFATE ION, Uncharacterized protein yqjG
Authors:Branch, M.C, Cook, P.D, Harp, J.M, Armstrong, R.N.
Deposit date:2011-03-15
Release date:2012-03-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.205 Å)
Cite:Crystal Structure Analysis of yqjG from Escherichia Coli K-12
To be Published
3EE3
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BU of 3ee3 by Molmil
Crystal structure of Acanthamoeba polyphaga mimivirus nucleoside diphosphate kinase complexed with CDP
Descriptor: CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase
Authors:Jeudy, S, Lartigue, A, Claverie, J.M, Abergel, C.
Deposit date:2008-09-04
Release date:2009-06-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Dissecting the unique nucleotide specificity of mimivirus nucleoside diphosphate kinase.
J.Virol., 83, 2009
3ED4
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BU of 3ed4 by Molmil
Crystal structure of putative arylsulfatase from escherichia coli
Descriptor: ARYLSULFATASE, GLYCEROL, SODIUM ION, ...
Authors:Patskovsky, Y, Ozyurt, S, Gilmore, M, Chang, S, Bain, K, Wasserman, S, Koss, J, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-09-02
Release date:2008-09-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Arylsulfatase from Escherichia Coli
To be Published
4CLM
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BU of 4clm by Molmil
Structure of Salmonella typhi type I dehydroquinase irreversibly inhibited with a 1,3,4-trihydroxyciclohexane-1-carboxylic acid derivative
Descriptor: (1~{S},3~{S},4~{R},5~{R})-3-methyl-1,4,5-tris(hydroxyl)cyclohexane-1-carboxylic acid, 3-DEHYDROQUINATE DEHYDRATASE, CHLORIDE ION, ...
Authors:Otero, J.M, Llamas-Saiz, A.L, Tizon, L, Maneiro, M, Lence, E, Poza, S, Lamb, H, Hawkins, A.R, Blanco, B, Sedes, A, Peon, A, Gonzalez-Bello, C, van Raaij, M.J.
Deposit date:2014-01-15
Release date:2014-11-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Irreversible covalent modification of type I dehydroquinase with a stable Schiff base.
Org. Biomol. Chem., 13, 2015
1QAL
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BU of 1qal by Molmil
THE ACTIVE SITE BASE CONTROLS COFACTOR REACTIVITY IN ESCHERICHIA COLI AMINE OXIDASE : X-RAY CRYSTALLOGRAPHIC STUDIES WITH MUTATIONAL VARIANTS
Descriptor: CALCIUM ION, COPPER (II) ION, COPPER AMINE OXIDASE
Authors:Murray, J.M, Wilmot, C.M, Saysell, C.G, Jaeger, J, Knowles, P.F, Phillips, S.E, McPherson, M.J.
Deposit date:1999-03-19
Release date:1999-08-24
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The active site base controls cofactor reactivity in Escherichia coli amine oxidase: x-ray crystallographic studies with mutational variants.
Biochemistry, 38, 1999
1QC9
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BU of 1qc9 by Molmil
THE CRYSTALLOGRAPHIC STRUCTURE OF RESTRICTION ENDONUCLEASE ECO RI AT 3.3 A IN THE ABSENSE OF DNA
Descriptor: PROTEIN (ECO RI ENDONUCLEASE)
Authors:Chandrasekhar, K, Horvath, M.M, Samudzi, C, Choi, J, Rosenberg, J.M.
Deposit date:1999-05-18
Release date:1999-06-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:The 3.3 A Crystallographic Structure of Restriction Endonuclease Eco RI in the Absence of DNA
To be Published
3E2L
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BU of 3e2l by Molmil
Crystal Structure of the KPC-2 Beta-lactamase/Beta-lactamase inhibitor protein (BLIP)
Descriptor: Beta-lactamase inhibitory protein, Carbapenemase
Authors:Hanes, M.S, Jude, K.M, Berger, J.M, Kirsch, J.F, Bonomo, R.A, Handel, T.M.
Deposit date:2008-08-05
Release date:2009-08-04
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural and biochemical characterization of the interaction between KPC-2 beta-lactamase and beta-lactamase inhibitor protein
Biochemistry, 48, 2009
2HJ8
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BU of 2hj8 by Molmil
Solution NMR structure of the C-terminal domain of the interferon alpha-inducible ISG15 protein from Homo sapiens. Northeast Structural Genomics target HR2873B
Descriptor: Interferon-induced 17 kDa protein
Authors:Aramini, J.M, Ho, C.K, Yin, C, Cunningham, K, Janjua, H, Ma, L.-C, Xiao, R, Acton, T.B, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-06-30
Release date:2006-08-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution NMR structure of the C-terminal domain of the interferon alpha-inducible ISG15 protein from Homo sapiens. Northeast Structural Genomics target HR2873B.
To be Published
3KNR
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BU of 3knr by Molmil
Bacillus cereus metallo-beta-lactamase Cys221Asp mutant, 1 mM Zn(II)
Descriptor: ACETIC ACID, Beta-lactamase 2, GLYCEROL, ...
Authors:Medrano Martin, F.J, Gonzalez, J.M, Vila, A.J.
Deposit date:2009-11-12
Release date:2010-11-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Metallo-beta-lactamases withstand low Zn(II) conditions by tuning metal-ligand interactions.
Nat.Chem.Biol., 8, 2012
3RD9
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BU of 3rd9 by Molmil
Human Cyclophilin D Complexed with a Fragment
Descriptor: 3-(3-methyl-5-oxo-4,5-dihydro-1H-pyrazol-1-yl)benzenesulfonamide, DI(HYDROXYETHYL)ETHER, Peptidyl-prolyl cis-trans isomerase F, ...
Authors:Colliandre, L, Ahmed-Belkacem, H, Bessin, Y, Pawlotsky, J.M, Guichou, J.F.
Deposit date:2011-04-01
Release date:2012-03-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Fragment-based discovery of a new family of non-peptidic small-molecule cyclophilin inhibitors with potent antiviral activities.
Nat Commun, 7, 2016
2HJV
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BU of 2hjv by Molmil
Structure of the second domain (residues 207-368) of the Bacillus subtilis YxiN protein
Descriptor: ATP-dependent RNA helicase dbpA
Authors:McKay, D.B, Caruthers, J.M.
Deposit date:2006-07-02
Release date:2006-12-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of the second domain of the Bacillus subtilis DEAD-box RNA helicase YxiN.
Acta Crystallogr.,Sect.F, 62, 2006
2HM2
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BU of 2hm2 by Molmil
Solution structure of ASC2
Descriptor: Pyrin-only protein 1
Authors:Natarajan, A, Ghose, R, Hill, J.M.
Deposit date:2006-07-11
Release date:2006-07-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure and dynamics of ASC2, a pyrin domain-only protein that regulates inflammatory signaling
J.Biol.Chem., 281, 2006
3EOI
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BU of 3eoi by Molmil
CRYSTAL STRUCTURE OF putative PROTEIN PilM from Escherichia coli B7A
Descriptor: PilM
Authors:Malashkevich, V.N, Toro, R, Bonanno, J.B, Sauder, J.M, Wasserman, S, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-09-26
Release date:2008-10-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Crystal structure of an uncharacterized protein
to be published
4CNP
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BU of 4cnp by Molmil
Structure of the Salmonella typhi type I dehydroquinase inhibited by a 3-epiquinic acid derivative
Descriptor: (2S)-2-HYDROXY-3-EPIQUINIC ACID, 3-DEHYDROQUINATE DEHYDRATASE, CHLORIDE ION, ...
Authors:Otero, J.M, Llamas-Saiz, A.L, Maneiro, M, Peon, A, Lence, E, Lamb, H, Hawkins, A.R, Gonzalez-Bello, C, van Raaij, M.J.
Deposit date:2014-01-23
Release date:2015-02-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Mechanistic Insight Into the Reaction Catalyzed by Type I Dehydroquinase
To be Published
1QSC
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BU of 1qsc by Molmil
CRYSTAL STRUCTURE OF THE TRAF DOMAIN OF TRAF2 IN A COMPLEX WITH A PEPTIDE FROM THE CD40 RECEPTOR
Descriptor: CD40 RECEPTOR, TNF RECEPTOR ASSOCIATED FACTOR 2
Authors:McWhirter, S.M, Pullen, S.S, Holton, J.M, Crute, J.J, Kehry, M.R, Alber, T.
Deposit date:1999-06-20
Release date:1999-08-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystallographic analysis of CD40 recognition and signaling by human TRAF2.
Proc.Natl.Acad.Sci.USA, 96, 1999
3EBO
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BU of 3ebo by Molmil
Glycogen Phosphorylase b/Chrysin complex
Descriptor: Glycogen phosphorylase, muscle form, chrysin
Authors:Oikonomakos, N.G, Zographos, S.E, Leonidas, D.D, Hayes, J.M, Tiraidis, C, Alexacou, K.-M.
Deposit date:2008-08-28
Release date:2009-09-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Sourcing the affinity of flavonoids for the glycogen phosphorylase inhibitor site via crystallography, kinetics and QM/MM-PBSA binding studies: Comparison of chrysin and flavopiridol
Food Chem.Toxicol., 61, 2013
2HIK
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BU of 2hik by Molmil
heterotrimeric PCNA sliding clamp
Descriptor: PCNA1 (SSO0397), PCNA2 (SSO1047), PCNA3 (SSO0405)
Authors:Pascal, J.M, Tsodikov, O.V, Ellenberger, T.
Deposit date:2006-06-29
Release date:2006-11-07
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:A Flexible Interface between DNA Ligase and PCNA Supports Conformational Switching and Efficient Ligation of DNA.
Mol.Cell, 24, 2006
4BD2
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BU of 4bd2 by Molmil
Bax domain swapped dimer in complex with BidBH3
Descriptor: APOPTOSIS REGULATOR BAX, BH3-INTERACTING DOMAIN DEATH AGONIST
Authors:Czabotar, P.E, Westphal, D, Adams, J.M, Colman, P.M.
Deposit date:2012-10-04
Release date:2013-02-13
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.206 Å)
Cite:Bax Crystal Structures Reveal How Bh3 Domains Activate Bax and Nucleate its Oligomerization to Induce Apoptosis.
Cell(Cambridge,Mass.), 152, 2013
3IRV
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BU of 3irv by Molmil
CRYSTAL STRUCTURE OF CYSTEINE HYDROLASE PSPPH_2384 FROM Pseudomonas syringae pv. phaseolicola 1448A
Descriptor: CYSTEINE HYDROLASE, GLYCEROL, PHOSPHATE ION
Authors:Patskovsky, Y, Malashkevich, V, Toro, R, Foti, R, Dickey, M, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-08-24
Release date:2009-09-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:CRYSTAL STRUCTURE OF CYSTEINE HYDROLASE PSPPH_2384 FROM Pseudomonas syringae
To be Published
3EEY
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BU of 3eey by Molmil
CRYSTAL STRUCTURE OF PUTATIVE RRNA-METHYLASE FROM Clostridium thermocellum
Descriptor: GLYCEROL, Putative rRNA methylase, S-ADENOSYLMETHIONINE, ...
Authors:Patskovsky, Y, Ramagopal, U.A, Toro, R, Rutter, M, Hu, S, Bain, K, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-09-06
Release date:2008-09-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Rrna-Methylase from Clostridium Thermocellum
To be Published
4BIL
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BU of 4bil by Molmil
Threading model of the T7 large terminase within the gp8gp19 complex
Descriptor: DNA MATURASE B
Authors:Dauden, M.I, Martin-Benito, J, Sanchez-Ferrero, J.C, Pulido-Cid, M, Valpuesta, J.M, Carrascosa, J.L.
Deposit date:2013-04-10
Release date:2013-05-08
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (29 Å)
Cite:Large Terminase Conformational Change Induced by Connector Binding in Bacteriophage T7
J.Biol.Chem., 288, 2013
3E61
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BU of 3e61 by Molmil
Crystal structure of a putative transcriptional repressor of ribose operon from Staphylococcus saprophyticus subsp. saprophyticus
Descriptor: GLYCEROL, Putative transcriptional repressor of ribose operon
Authors:Bonanno, J.B, Freeman, J, Bain, K.T, Chang, S, Romero, R, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-08-14
Release date:2008-08-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a putative transcriptional repressor of ribose operon from Staphylococcus saprophyticus subsp. saprophyticus
To be Published

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數據於2024-08-28公開中

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