Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 5628 件

4CKY
DownloadVisualize
BU of 4cky by Molmil
Structure of the Mycobacterium tuberculosis Type II Dehydroquinase inhibited by a 3-dehydroquinic acid derivative
分子名称: 2,2-dimethyl-3-dehydroquinic acid, 3-DEHYDROQUINATE DEHYDRATASE, SODIUM ION, ...
著者Otero, J.M, Llamas-Saiz, A.L, Maneiro, M, Peon, A, Sedes, A, Lamb, H, Hawkins, A.R, Gonzalez-Bello, C, van Raaij, M.J.
登録日2014-01-10
公開日2015-03-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Investigation of the Dehydratation Mechanism Catalyzed by the Type II Dehydroquinase
To be Published
1O25
DownloadVisualize
BU of 1o25 by Molmil
Crystal structure of Thymidylate Synthase Complementing Protein (TM0449) from Thermotoga maritima with dUMP at 2.4 A resolution
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Thymidylate synthase thyX
著者Mathews, I.I, Deacon, A.M, Canaves, J.M, McMullan, D, Lesley, S.A, Agarwalla, S, Kuhn, P, Joint Center for Structural Genomics (JCSG)
登録日2003-02-20
公開日2003-06-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Functional Analysis of Substrate and Cofactor Complex Structures of a Thymidylate Synthase-Complementing Protein
Structure, 11, 2003
3EC2
DownloadVisualize
BU of 3ec2 by Molmil
Crystal structure of the DnaC helicase loader
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA replication protein DnaC, MAGNESIUM ION
著者Mott, M.L, Erzberger, J.P, Coons, M.M, Berger, J.M.
登録日2008-08-28
公開日2008-11-25
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural synergy and molecular crosstalk between bacterial helicase loaders and replication initiators.
Cell(Cambridge,Mass.), 135, 2008
3R3E
DownloadVisualize
BU of 3r3e by Molmil
The glutathione bound structure of YqjG, a glutathione transferase homolog from Escherichia coli K-12
分子名称: GLUTATHIONE, SULFATE ION, Uncharacterized protein yqjG
著者Branch, M.C, Cook, P.D, Harp, J.M, Armstrong, R.N.
登録日2011-03-15
公開日2012-03-14
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.205 Å)
主引用文献Crystal Structure Analysis of yqjG from Escherichia Coli K-12
To be Published
3EE3
DownloadVisualize
BU of 3ee3 by Molmil
Crystal structure of Acanthamoeba polyphaga mimivirus nucleoside diphosphate kinase complexed with CDP
分子名称: CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase
著者Jeudy, S, Lartigue, A, Claverie, J.M, Abergel, C.
登録日2008-09-04
公開日2009-06-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Dissecting the unique nucleotide specificity of mimivirus nucleoside diphosphate kinase.
J.Virol., 83, 2009
3ED4
DownloadVisualize
BU of 3ed4 by Molmil
Crystal structure of putative arylsulfatase from escherichia coli
分子名称: ARYLSULFATASE, GLYCEROL, SODIUM ION, ...
著者Patskovsky, Y, Ozyurt, S, Gilmore, M, Chang, S, Bain, K, Wasserman, S, Koss, J, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-09-02
公開日2008-09-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of Arylsulfatase from Escherichia Coli
To be Published
4CLM
DownloadVisualize
BU of 4clm by Molmil
Structure of Salmonella typhi type I dehydroquinase irreversibly inhibited with a 1,3,4-trihydroxyciclohexane-1-carboxylic acid derivative
分子名称: (1~{S},3~{S},4~{R},5~{R})-3-methyl-1,4,5-tris(hydroxyl)cyclohexane-1-carboxylic acid, 3-DEHYDROQUINATE DEHYDRATASE, CHLORIDE ION, ...
著者Otero, J.M, Llamas-Saiz, A.L, Tizon, L, Maneiro, M, Lence, E, Poza, S, Lamb, H, Hawkins, A.R, Blanco, B, Sedes, A, Peon, A, Gonzalez-Bello, C, van Raaij, M.J.
登録日2014-01-15
公開日2014-11-05
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Irreversible covalent modification of type I dehydroquinase with a stable Schiff base.
Org. Biomol. Chem., 13, 2015
1QAL
DownloadVisualize
BU of 1qal by Molmil
THE ACTIVE SITE BASE CONTROLS COFACTOR REACTIVITY IN ESCHERICHIA COLI AMINE OXIDASE : X-RAY CRYSTALLOGRAPHIC STUDIES WITH MUTATIONAL VARIANTS
分子名称: CALCIUM ION, COPPER (II) ION, COPPER AMINE OXIDASE
著者Murray, J.M, Wilmot, C.M, Saysell, C.G, Jaeger, J, Knowles, P.F, Phillips, S.E, McPherson, M.J.
登録日1999-03-19
公開日1999-08-24
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The active site base controls cofactor reactivity in Escherichia coli amine oxidase: x-ray crystallographic studies with mutational variants.
Biochemistry, 38, 1999
1QC9
DownloadVisualize
BU of 1qc9 by Molmil
THE CRYSTALLOGRAPHIC STRUCTURE OF RESTRICTION ENDONUCLEASE ECO RI AT 3.3 A IN THE ABSENSE OF DNA
分子名称: PROTEIN (ECO RI ENDONUCLEASE)
著者Chandrasekhar, K, Horvath, M.M, Samudzi, C, Choi, J, Rosenberg, J.M.
登録日1999-05-18
公開日1999-06-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The 3.3 A Crystallographic Structure of Restriction Endonuclease Eco RI in the Absence of DNA
To be Published
2HJ8
DownloadVisualize
BU of 2hj8 by Molmil
Solution NMR structure of the C-terminal domain of the interferon alpha-inducible ISG15 protein from Homo sapiens. Northeast Structural Genomics target HR2873B
分子名称: Interferon-induced 17 kDa protein
著者Aramini, J.M, Ho, C.K, Yin, C, Cunningham, K, Janjua, H, Ma, L.-C, Xiao, R, Acton, T.B, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2006-06-30
公開日2006-08-01
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution NMR structure of the C-terminal domain of the interferon alpha-inducible ISG15 protein from Homo sapiens. Northeast Structural Genomics target HR2873B.
To be Published
3E2L
DownloadVisualize
BU of 3e2l by Molmil
Crystal Structure of the KPC-2 Beta-lactamase/Beta-lactamase inhibitor protein (BLIP)
分子名称: Beta-lactamase inhibitory protein, Carbapenemase
著者Hanes, M.S, Jude, K.M, Berger, J.M, Kirsch, J.F, Bonomo, R.A, Handel, T.M.
登録日2008-08-05
公開日2009-08-04
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Structural and biochemical characterization of the interaction between KPC-2 beta-lactamase and beta-lactamase inhibitor protein
Biochemistry, 48, 2009
3KNR
DownloadVisualize
BU of 3knr by Molmil
Bacillus cereus metallo-beta-lactamase Cys221Asp mutant, 1 mM Zn(II)
分子名称: ACETIC ACID, Beta-lactamase 2, GLYCEROL, ...
著者Medrano Martin, F.J, Gonzalez, J.M, Vila, A.J.
登録日2009-11-12
公開日2010-11-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Metallo-beta-lactamases withstand low Zn(II) conditions by tuning metal-ligand interactions.
Nat.Chem.Biol., 8, 2012
3RD9
DownloadVisualize
BU of 3rd9 by Molmil
Human Cyclophilin D Complexed with a Fragment
分子名称: 3-(3-methyl-5-oxo-4,5-dihydro-1H-pyrazol-1-yl)benzenesulfonamide, DI(HYDROXYETHYL)ETHER, Peptidyl-prolyl cis-trans isomerase F, ...
著者Colliandre, L, Ahmed-Belkacem, H, Bessin, Y, Pawlotsky, J.M, Guichou, J.F.
登録日2011-04-01
公開日2012-03-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Fragment-based discovery of a new family of non-peptidic small-molecule cyclophilin inhibitors with potent antiviral activities.
Nat Commun, 7, 2016
2HJV
DownloadVisualize
BU of 2hjv by Molmil
Structure of the second domain (residues 207-368) of the Bacillus subtilis YxiN protein
分子名称: ATP-dependent RNA helicase dbpA
著者McKay, D.B, Caruthers, J.M.
登録日2006-07-02
公開日2006-12-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure of the second domain of the Bacillus subtilis DEAD-box RNA helicase YxiN.
Acta Crystallogr.,Sect.F, 62, 2006
2HM2
DownloadVisualize
BU of 2hm2 by Molmil
Solution structure of ASC2
分子名称: Pyrin-only protein 1
著者Natarajan, A, Ghose, R, Hill, J.M.
登録日2006-07-11
公開日2006-07-25
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure and dynamics of ASC2, a pyrin domain-only protein that regulates inflammatory signaling
J.Biol.Chem., 281, 2006
3EOI
DownloadVisualize
BU of 3eoi by Molmil
CRYSTAL STRUCTURE OF putative PROTEIN PilM from Escherichia coli B7A
分子名称: PilM
著者Malashkevich, V.N, Toro, R, Bonanno, J.B, Sauder, J.M, Wasserman, S, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-09-26
公開日2008-10-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Crystal structure of an uncharacterized protein
to be published
4CNP
DownloadVisualize
BU of 4cnp by Molmil
Structure of the Salmonella typhi type I dehydroquinase inhibited by a 3-epiquinic acid derivative
分子名称: (2S)-2-HYDROXY-3-EPIQUINIC ACID, 3-DEHYDROQUINATE DEHYDRATASE, CHLORIDE ION, ...
著者Otero, J.M, Llamas-Saiz, A.L, Maneiro, M, Peon, A, Lence, E, Lamb, H, Hawkins, A.R, Gonzalez-Bello, C, van Raaij, M.J.
登録日2014-01-23
公開日2015-02-18
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Mechanistic Insight Into the Reaction Catalyzed by Type I Dehydroquinase
To be Published
1QSC
DownloadVisualize
BU of 1qsc by Molmil
CRYSTAL STRUCTURE OF THE TRAF DOMAIN OF TRAF2 IN A COMPLEX WITH A PEPTIDE FROM THE CD40 RECEPTOR
分子名称: CD40 RECEPTOR, TNF RECEPTOR ASSOCIATED FACTOR 2
著者McWhirter, S.M, Pullen, S.S, Holton, J.M, Crute, J.J, Kehry, M.R, Alber, T.
登録日1999-06-20
公開日1999-08-01
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystallographic analysis of CD40 recognition and signaling by human TRAF2.
Proc.Natl.Acad.Sci.USA, 96, 1999
3EBO
DownloadVisualize
BU of 3ebo by Molmil
Glycogen Phosphorylase b/Chrysin complex
分子名称: Glycogen phosphorylase, muscle form, chrysin
著者Oikonomakos, N.G, Zographos, S.E, Leonidas, D.D, Hayes, J.M, Tiraidis, C, Alexacou, K.-M.
登録日2008-08-28
公開日2009-09-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Sourcing the affinity of flavonoids for the glycogen phosphorylase inhibitor site via crystallography, kinetics and QM/MM-PBSA binding studies: Comparison of chrysin and flavopiridol
Food Chem.Toxicol., 61, 2013
2HIK
DownloadVisualize
BU of 2hik by Molmil
heterotrimeric PCNA sliding clamp
分子名称: PCNA1 (SSO0397), PCNA2 (SSO1047), PCNA3 (SSO0405)
著者Pascal, J.M, Tsodikov, O.V, Ellenberger, T.
登録日2006-06-29
公開日2006-11-07
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献A Flexible Interface between DNA Ligase and PCNA Supports Conformational Switching and Efficient Ligation of DNA.
Mol.Cell, 24, 2006
4BD2
DownloadVisualize
BU of 4bd2 by Molmil
Bax domain swapped dimer in complex with BidBH3
分子名称: APOPTOSIS REGULATOR BAX, BH3-INTERACTING DOMAIN DEATH AGONIST
著者Czabotar, P.E, Westphal, D, Adams, J.M, Colman, P.M.
登録日2012-10-04
公開日2013-02-13
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.206 Å)
主引用文献Bax Crystal Structures Reveal How Bh3 Domains Activate Bax and Nucleate its Oligomerization to Induce Apoptosis.
Cell(Cambridge,Mass.), 152, 2013
3IRV
DownloadVisualize
BU of 3irv by Molmil
CRYSTAL STRUCTURE OF CYSTEINE HYDROLASE PSPPH_2384 FROM Pseudomonas syringae pv. phaseolicola 1448A
分子名称: CYSTEINE HYDROLASE, GLYCEROL, PHOSPHATE ION
著者Patskovsky, Y, Malashkevich, V, Toro, R, Foti, R, Dickey, M, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-08-24
公開日2009-09-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献CRYSTAL STRUCTURE OF CYSTEINE HYDROLASE PSPPH_2384 FROM Pseudomonas syringae
To be Published
3EEY
DownloadVisualize
BU of 3eey by Molmil
CRYSTAL STRUCTURE OF PUTATIVE RRNA-METHYLASE FROM Clostridium thermocellum
分子名称: GLYCEROL, Putative rRNA methylase, S-ADENOSYLMETHIONINE, ...
著者Patskovsky, Y, Ramagopal, U.A, Toro, R, Rutter, M, Hu, S, Bain, K, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-09-06
公開日2008-09-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of Rrna-Methylase from Clostridium Thermocellum
To be Published
4BIL
DownloadVisualize
BU of 4bil by Molmil
Threading model of the T7 large terminase within the gp8gp19 complex
分子名称: DNA MATURASE B
著者Dauden, M.I, Martin-Benito, J, Sanchez-Ferrero, J.C, Pulido-Cid, M, Valpuesta, J.M, Carrascosa, J.L.
登録日2013-04-10
公開日2013-05-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (29 Å)
主引用文献Large Terminase Conformational Change Induced by Connector Binding in Bacteriophage T7
J.Biol.Chem., 288, 2013
3E61
DownloadVisualize
BU of 3e61 by Molmil
Crystal structure of a putative transcriptional repressor of ribose operon from Staphylococcus saprophyticus subsp. saprophyticus
分子名称: GLYCEROL, Putative transcriptional repressor of ribose operon
著者Bonanno, J.B, Freeman, J, Bain, K.T, Chang, S, Romero, R, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-08-14
公開日2008-08-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a putative transcriptional repressor of ribose operon from Staphylococcus saprophyticus subsp. saprophyticus
To be Published

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon