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PDB: 5628 件

1O2A
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Crystal structure of Thymidylate Synthase Complementing Protein (TM0449) from Thermotoga maritima with FAD at 1.8 A resolution
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Thymidylate synthase thyX
著者Mathews, I.I, Deacon, A.M, Canaves, J.M, McMullan, D, Lesley, S.A, Agarwalla, S, Kuhn, P, Joint Center for Structural Genomics (JCSG)
登録日2003-02-18
公開日2003-06-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Functional Analysis of Substrate and Cofactor Complex Structures of a Thymidylate Synthase-Complementing Protein
Structure, 11, 2003
3JW5
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Crystal structure of Bacillus anthracis (Y102F) dihydrofolate reductase complexed with NADPH and Trimethoprim
分子名称: Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, TRIMETHOPRIM
著者Anderson, A.C, Beierlein, J.M, Karri, N.G.
登録日2009-09-17
公開日2010-09-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Mutational Studies into Trimethoprim Resistance in Bacillus anthracis Dihydrofolate Reductase
To be Published
3CF1
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Structure of P97/vcp in complex with ADP/ADP.alfx
分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Transitional endoplasmic reticulum ATPase
著者Davies, J.M, Delabarre, B, Brunger, A.T, Weis, W.I.
登録日2008-03-01
公開日2008-04-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (4.4 Å)
主引用文献Improved structures of full-length p97, an AAA ATPase: implications for mechanisms of nucleotide-dependent conformational change.
Structure, 16, 2008
2FWV
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Crystal Structure of Rv0813
分子名称: 1,4-DIETHYLENE DIOXIDE, GLYCEROL, hypothetical protein MtubF_01000852
著者Shepard, W, Haouz, A, Grana, M, Buschiazzo, A, Betton, J.M, Cole, S.T, Alzari, P.M, Structural Proteomics in Europe (SPINE)
登録日2006-02-03
公開日2006-08-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Crystal Structure of Rv0813c from Mycobacterium tuberculosis Reveals a New Family of Fatty Acid-Binding Protein-Like Proteins in Bacteria
J.Bacteriol., 189, 2007
3HM7
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Crystal structure of allantoinase from Bacillus halodurans C-125
分子名称: Allantoinase, ZINC ION
著者Patskovsky, Y, Romero, R, Rutter, M, Miller, S, Wasserman, S.R, Sauder, J.M, Raushel, F.M, Burley, S.K, Almo, S.C, New York Structural GenomiX Research Consortium (NYSGXRC), New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-05-28
公開日2009-06-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structure of Allantoinase from Bacillus Halodurans
To be Published
1M9O
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NMR structure of the first Zinc Binding domain of Nup475/TTP/TIS11
分子名称: Tristetraproline, ZINC ION
著者Amann, B.T, Worthington, M.T, Berg, J.M.
登録日2002-07-29
公開日2003-06-03
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献A Cys3His Zinc-Binding Domain from Nup475/Tristetraproline: a Novel Fold with a Disklike Structure
Biochemistry, 42, 2003
2FZ6
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Crystal structure of hydrophobin HFBI
分子名称: Hydrophobin-1, ZINC ION
著者Hakanpaa, J.M, Rouvinen, J.
登録日2006-02-09
公開日2006-08-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Two crystal structures of Trichoderma reesei hydrophobin HFBI--The structure of a protein amphiphile with and without detergent interaction.
Protein Sci., 15, 2006
3CNB
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Crystal structure of signal receiver domain of DNA binding response regulator protein (merR) from Colwellia psychrerythraea 34H
分子名称: DNA-binding response regulator, merR family
著者Patskovsky, Y, Romero, R, Freeman, J, Hu, S, Groshong, C, Wasserman, S.R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-03-25
公開日2008-04-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of signal receiver domain of DNA binding response regulator (merR) from Colwellia psychrerythraea 34H.
To be Published
1SM1
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COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH QUINUPRISTIN AND DALFOPRISTIN
分子名称: 23S RIBOSOMAL RNA, 5-(2-DIETHYLAMINO-ETHANESULFONYL)-21-HYDROXY-10-ISOPROPYL-11,19-DIMETHYL-9,26-DIOXA-3,15,28-TRIAZA-TRICYCLO[23.2.1.00,255]OCTACOSA-1(27),12,17,19,25(28)-PENTAENE-2,8,14,23-TETRAONE, 50S RIBOSOMAL PROTEIN L11, ...
著者Harms, J.M, Schluenzen, F, Fucini, P, Bartels, H, Yonath, A.
登録日2004-03-08
公開日2004-08-03
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (3.42 Å)
主引用文献Alterations at the Peptidyl Transferase Centre of the Ribosome Induced by the Synergistic Action of the Streptogramins Dalfopristin and Quinupristin.
Bmc Biol., 2, 2004
4B88
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Ancestral (GNCA) Beta-lactamase class A
分子名称: BETA-LACTAMASE, FORMIC ACID
著者Gavira, J.A, Risso, V.A, Sanchez-Ruiz, J.M.
登録日2012-08-24
公開日2013-02-20
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Hyperstability and Substrate Promiscuity in Laboratory Resurrections of Precambrian Beta-Lactamases.
J.Am.Chem.Soc., 135, 2013
1S75
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SOLUTION STRUCTURE OF A DNA DUPLEX CONTAINING AN ALPHA-ANOMERIC ADENOSINE: INSIGHTS INTO SUBSTRATE RECOGNITION BY ENDONUCLEASE IV
分子名称: 5'-D(*CP*GP*TP*CP*GP*TP*GP*GP*AP*C)-3', 5'-D(*GP*TP*CP*CP*(A3A)P*CP*GP*AP*CP*G)-3'
著者Aramini, J.M, Cleaver, S.H, Pon, R.T, Cunningham, R.P, Germann, M.W.
登録日2004-01-28
公開日2004-04-20
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution Structure of a DNA Duplex Containing an alpha-Anomeric Adenosine: Insights into Substrate Recognition by Endonuclease IV.
J.Mol.Biol., 338, 2004
1S84
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PORCINE TRYPSIN COVALENT COMPLEX WITH 4-AMINO BUTANOL, BORATE AND ETHYLENE GLYCOL
分子名称: 1,2-ETHANEDIOL, 4-(1,3,2-DIOXABOROLAN-2-YLOXY)BUTAN-1-AMINIUM, CALCIUM ION, ...
著者Transue, T.R, Krahn, J.M, Gabel, S.A, Derose, E.F, London, R.E.
登録日2004-01-30
公開日2004-03-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献X-ray and NMR characterization of covalent complexes of trypsin, borate, and alcohols.
Biochemistry, 43, 2004
4BKJ
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BU of 4bkj by Molmil
Crystal structure of the human DDR1 kinase domain in complex with imatinib
分子名称: 1,2-ETHANEDIOL, 4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE, EPITHELIAL DISCOIDIN DOMAIN-CONTAINING RECEPTOR 1
著者Canning, P, Elkins, J.M, Goubin, S, Mahajan, P, Krojer, T, Vollmar, M, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A.
登録日2013-04-25
公開日2013-05-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural Mechanisms Determining Inhibition of the Collagen Receptor Ddr1 by Selective and Multi-Targeted Type II Kinase Inhibitors
J.Mol.Biol., 426, 2014
2FMP
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DNA Polymerase beta with a terminated gapped DNA substrate and ddCTP with sodium in the catalytic site
分子名称: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, 5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', ...
著者Batra, V.K, Beard, W.A, Shock, D.D, Krahn, J.M, Pedersen, L.C, Wilson, S.H.
登録日2006-01-09
公開日2006-04-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Magnesium-induced assembly of a complete DNA polymerase catalytic complex.
Structure, 14, 2006
3QQT
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Amphiphilic nanotubes in the crystal structure of a biosurfactant protein hydrophobin HFBII
分子名称: DODECYL SULFATE, Hydrophobin-2, SULFATE ION
著者Kallio, J.M, Rouvinen, J.
登録日2011-02-16
公開日2011-11-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Amphiphilic nanotubes in the crystal structure of a biosurfactant protein hydrophobin HFBII.
Chem.Commun.(Camb.), 47, 2011
3JWF
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Crystal structure of Bacillus anthracis (Y102F) dihydrofolate reductase complexed with NADPH and (R)-2,4-diamino-5-(3-hydroxy-3-(3,4,5-trimethoxyphenyl)prop-1-ynyl)-6-methylpyrimidine (UCP113A)
分子名称: (1R)-3-(2,4-diamino-6-methylpyrimidin-5-yl)-1-(3,4,5-trimethoxyphenyl)prop-2-yn-1-ol, Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Anderson, A.C, Beierlein, J.M, Karri, N.G.
登録日2009-09-18
公開日2010-09-29
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Targeted Mutations in Bacillus anthracis Dihydrofolate Reductase Condense Complex Structure-Activity Relationships
J.Med.Chem., 2010
4AW1
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Human PDK1 Kinase Domain in Complex with Allosteric Compound PS210 Bound to the PIF-Pocket
分子名称: 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1, ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, ...
著者Schulze, J.O, Busschots, K, Lopez-Garcia, L.A, Lammi, C, Stroba, A, Zeuzem, S, Piiper, A, Alzari, P.M, Neimanis, S, Arencibia, J.M, Engel, M, Biondi, R.M.
登録日2012-05-30
公開日2012-10-03
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Substrate-Selective Inhibition of Protein Kinase Pdk1 by Small Compounds that Bind to the Pif-Pocket Allosteric Docking Site.
Chem.Biol., 19, 2012
3K9D
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CRYSTAL STRUCTURE OF PROBABLE ALDEHYDE DEHYDROGENASE FROM Listeria monocytogenes EGD-e
分子名称: ALDEHYDE DEHYDROGENASE, CHLORIDE ION, GLYCEROL
著者Patskovsky, Y, Toro, R, Freeman, J, Miller, S, Sauder, J.M, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-10-15
公開日2009-10-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Aldehyde Dehydrogenase from Listeria Monocytogenes
To be Published
4BBB
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THE STRUCTURE OF VACCINIA VIRUS N1 Q61Y MUTANT
分子名称: N1L
著者Maluquer de Motes, C, Cooray, S, McGourty, K, Ren, H, Bahar, M.W, Stuart, D.I, Grimes, J.M, Graham, S.C, Smith, G.L.
登録日2012-09-21
公開日2012-10-03
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Inhibition of Apoptosis and NF-kappaB Activation by Vaccinia Protein N1 Occur Via Distinct Binding Surfaces and Make Different Contributions to Virulence.
Plos Pathog., 7, 2011
1M1J
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Crystal structure of native chicken fibrinogen with two different bound ligands
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Yang, Z, Kollman, J.M, Pandi, L, Doolittle, R.F.
登録日2002-06-19
公開日2002-06-26
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structure of Native Chicken Fibrinogen at 2.7 A Resolution
Biochemistry, 40, 2001
3KAK
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Structure of homoglutathione synthetase from Glycine max in open conformation with gamma-glutamyl-cysteine bound.
分子名称: GAMMA-GLUTAMYLCYSTEINE, Homoglutathione synthetase
著者Galant, A, Arkus, K.A.J, Zubieta, C, Cahoon, R.E, Jez, J.M.
登録日2009-10-19
公開日2009-12-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Structural Basis for Evolution of Product Diversity in Soybean Glutathione Biosynthesis.
Plant Cell, 21, 2009
3I15
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Cobalt-substituted metallo-beta-lactamase from Bacillus cereus: residue Cys168 fully oxidized
分子名称: Beta-lactamase 2, COBALT (II) ION
著者Gonzalez, J.M, Buschiazzo, A, Vila, A.J.
登録日2009-06-25
公開日2009-12-29
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Evidence of adaptability in metal coordination geometry and active-site loop conformation among B1 metallo-beta-lactamases .
Biochemistry, 49, 2010
3J2P
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CryoEM structure of Dengue virus envelope protein heterotetramer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein E, ...
著者Zhang, X, Ge, P, Yu, X, Brannan, J.M, Bi, G, Zhang, Q, Schein, S, Zhou, Z.H.
登録日2012-11-30
公開日2012-12-19
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cryo-EM structure of the mature dengue virus at 3.5-A resolution.
Nat.Struct.Mol.Biol., 20, 2012
1M7T
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Solution Structure and Dynamics of the Human-Escherichia coli Thioredoxin Chimera: Insights into Thermodynamic Stability
分子名称: Chimera of Human and E. coli thioredoxin
著者Dangi, B, Dobrodumov, A.V, Louis, J.M, Gronenborn, A.M.
登録日2002-07-22
公開日2002-09-25
最終更新日2021-10-27
実験手法SOLUTION NMR
主引用文献Solution Structure and Dynamics of the Human-Escherichia coli Thioredoxin Chimera: Insights into Thermodynamic Stability
Biochemistry, 41, 2002
8CYO
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Nurr1 Covalently Bound to a Synthetic Ligand, 10.25, via a Disulfide Bond
分子名称: 2-(3,4-dichlorophenoxy)-N-(2-sulfanylethyl)acetamide, CHLORIDE ION, Nuclear receptor subfamily 4 group A member 2
著者Bruning, J.M, Liu, J, England, P.M.
登録日2022-05-24
公開日2024-01-17
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Nurr1 Covalently Bound to a Synthetic Ligand, 10.25, via a Disulfide Bond
To Be Published

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件を2024-08-28に公開中

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