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PDB: 5628 results

7KRQ
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BU of 7krq by Molmil
Structural impact on SARS-CoV-2 spike protein by D614G substitution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, J, Cai, Y.F, Xiao, T.S, Lu, J.M, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Volloch, S.R, Zhu, H.S, Woosley, A.N, Yang, W, Sliz, P, Chen, B.
Deposit date:2020-11-20
Release date:2021-03-31
Last modified:2021-05-12
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Structural impact on SARS-CoV-2 spike protein by D614G substitution.
Science, 372, 2021
4ALA
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BU of 4ala by Molmil
Structure of Dengue virus DIII in complex with Fab 2H12
Descriptor: ENVELOPE PROTEIN, FAB 2H12 HEAVY CHAIN, FAB 2H12 LIGHT CHAIN, ...
Authors:Midgley, C.M, Flanagan, A, Mongkolsapaya, J, Grimes, J.M, Screaton, G.R.
Deposit date:2012-03-02
Release date:2012-06-06
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural Analysis of a Dengue Cross-Reactive Antibody Complexed with Envelope Domain III Reveals the Molecular Basis of Cross-Reactivity.
J.Immunol., 188, 2012
1S0T
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BU of 1s0t by Molmil
Solution structure of a DNA duplex containing an alpha-anomeric adenosine: insights into substrate recognition by endonuclease IV
Descriptor: 5'-D(*Cp*Gp*Tp*Cp*Gp*Tp*Gp*Gp*Ap*C)-3', 5'-D(*Gp*Tp*Cp*Cp*(A3A)p*Cp*Gp*Ap*Cp*G)-3'
Authors:Aramini, J.M, Cleaver, S.H, Pon, R.T, Cunningham, R.P, Germann, M.W.
Deposit date:2004-01-04
Release date:2004-04-20
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of a DNA Duplex Containing an alpha-Anomeric Adenosine: Insights into Substrate Recognition by Endonuclease IV.
J.Mol.Biol., 338, 2004
3GB5
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BU of 3gb5 by Molmil
Crystal structure of Mus musculus iodotyrosine deiodinase (IYD) bound to FMN
Descriptor: ACETATE ION, FLAVIN MONONUCLEOTIDE, Iodotyrosine dehalogenase 1, ...
Authors:Thomas, S.R, McTamney, P.M, Adler, J.M, LaRonde-LeBlanc, N, Rokita, S.E.
Deposit date:2009-02-18
Release date:2009-05-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of iodotyrosine deiodinase, a novel flavoprotein responsible for iodide salvage in thyroid glands.
J.Biol.Chem., 284, 2009
1S0X
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BU of 1s0x by Molmil
Crystal structure of the human RORalpha ligand binding domain in complex with cholesterol sulfate at 2.2A
Descriptor: CHOLEST-5-EN-3-YL HYDROGEN SULFATE, Nuclear receptor ROR-alpha
Authors:Kallen, J, Schlaeppi, J.M, Bitsch, F, Delhon, I, Fournier, B.
Deposit date:2004-01-05
Release date:2004-02-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the human RORalpha Ligand binding domain in complex with cholesterol sulfate at 2.2 A
J.Biol.Chem., 279, 2004
3OQB
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BU of 3oqb by Molmil
CRYSTAL STRUCTURE OF putative oxidoreductase from Bradyrhizobium japonicum USDA 110
Descriptor: Oxidoreductase
Authors:Malashkevich, V.N, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-09-02
Release date:2010-09-15
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:CRYSTAL STRUCTURE OF putative oxidoreductase from Bradyrhizobium japonicum USDA 110
To be Published
3LQ7
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BU of 3lq7 by Molmil
Crystal structure of glutathione s-transferase from agrobacterium tumefaciens str. c58
Descriptor: Glutathione S-transferase
Authors:Patskovsky, Y, Toro, R, Gilmore, M, Chang, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-02-08
Release date:2010-02-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Glutathione S-Transferase from Agrobacterium Tumefaciens
To be Published
2FD3
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BU of 2fd3 by Molmil
Crystal Structure of Thioredoxin Mutant P34H
Descriptor: Thioredoxin 1
Authors:Gavira, J.A, Perez-Jimenez, R, Ibarra-Molero, B, Sanchez-Ruiz, J.M.
Deposit date:2005-12-13
Release date:2005-12-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal Structure of Thioredoxin Mutant P34H
To be Published
1SH2
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BU of 1sh2 by Molmil
Crystal Structure of Norwalk Virus Polymerase (Metal-free, Centered Orthorhombic)
Descriptor: RNA Polymerase
Authors:Ng, K.K, Pendas-Franco, N, Rojo, J, Boga, J.A, Machin, A, Alonso, J.M, Parra, F.
Deposit date:2004-02-24
Release date:2004-03-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of norwalk virus polymerase reveals the carboxyl terminus in the active site cleft.
J.Biol.Chem., 279, 2004
2FGI
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BU of 2fgi by Molmil
CRYSTAL STRUCTURE OF THE TYROSINE KINASE DOMAIN OF FGF RECEPTOR 1 IN COMPLEX WITH INHIBITOR PD173074
Descriptor: 1-TERT-BUTYL-3-[6-(3,5-DIMETHOXY-PHENYL)-2-(4-DIETHYLAMINO-BUTYLAMINO)-PYRIDO[2,3-D]PYRIMIDIN-7-YL]-UREA, PROTEIN (FIBROBLAST GROWTH FACTOR (FGF) RECEPTOR 1)
Authors:Mohammadi, M, Froum, S, Hamby, J.M, Schroeder, M, Panek, R.L, Lu, G.H, Eliseenkova, A.V, Green, D, Schlessinger, J, Hubbard, S.R.
Deposit date:1998-09-15
Release date:1999-09-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of an angiogenesis inhibitor bound to the FGF receptor tyrosine kinase domain.
EMBO J., 17, 1998
3L79
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BU of 3l79 by Molmil
Crystal Structure of Glycogen Phosphorylase DK1 complex
Descriptor: 1-(3-deoxy-3-fluoro-beta-D-glucopyranosyl)pyrimidine-2,4(1H,3H)-dione, Glycogen phosphorylase, muscle form
Authors:Tsirkone, V.G, Lamprakis, C, Hayes, J.M, Skamnaki, V, Drakou, C, Zographos, S.E, Leonidas, D.D.
Deposit date:2009-12-28
Release date:2010-10-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:1-(3-Deoxy-3-fluoro-beta-d-glucopyranosyl) pyrimidine derivatives as inhibitors of glycogen phosphorylase b: Kinetic, crystallographic and modelling studies.
Bioorg.Med.Chem., 18, 2010
3CJP
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BU of 3cjp by Molmil
Crystal structure of an uncharacterized amidohydrolase CAC3332 from Clostridium acetobutylicum
Descriptor: Predicted amidohydrolase, dihydroorotase family, ZINC ION
Authors:Malashkevich, V.N, Toro, R, Ramagopal, U.A, Bonanno, J.B, Meyer, A, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-03-13
Release date:2008-03-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of an uncharacterized amidohydrolase CAC3332 from Clostridium acetobutylicum.
To be Published
1N8C
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BU of 1n8c by Molmil
Solution Structure of a Cis-Opened (10R)-N6-Deoxyadenosine Adduct of (9S,10R)-(9,10)-Epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene in a DNA Duplex
Descriptor: (9S,10R)-9-HYDROXY-7,8,9,10-TETRAHYDROBENZO[A]PYRENE, 5'-D(*CP*CP*TP*CP*GP*TP*GP*AP*CP*CP*G)-3', 5'-D(*CP*GP*GP*TP*CP*AP*CP*GP*AP*GP*G)-3'
Authors:Volk, D.E, Thiviyanathan, V, Rice, J.S, Luxon, B.A, Shah, J.H, Yagi, H, Sayer, J.M, Yeh, H.J.C, Jerina, D.M, Gorenstein, D.G.
Deposit date:2002-11-20
Release date:2003-02-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of a Cis-Opened (10R)-N6-Deoxyadenosine Adduct of (9S,10R)-(9,10)-Epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene in a DNA Duplex
Biochemistry, 42, 2003
4C9W
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BU of 4c9w by Molmil
Crystal structure of NUDT1 (MTH1) with R-crizotinib
Descriptor: 3-[(1R)-1-(2,6-dichloro-3-fluorophenyl)ethoxy]-5-(1-piperidin-4-yl-1H-pyrazol-4-yl)pyridin-2-amine, 7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE, CHLORIDE ION, ...
Authors:Elkins, J.M, Salah, E, Huber, K, Superti-Furga, G, Abdul Azeez, K.R, Raynor, J, Krojer, T, von Delft, F, Bountra, C, Edwards, A, Knapp, S.
Deposit date:2013-10-03
Release date:2014-04-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Stereospecific Targeting of Mth1 by (S)-Crizotinib as an Anticancer Strategy.
Nature, 508, 2014
1NE6
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BU of 1ne6 by Molmil
Crystal structure of Sp-cAMP binding R1a subunit of cAMP-dependent protein kinase
Descriptor: 6-(6-AMINO-PURIN-9-YL)-2-THIOXO-TETRAHYDRO-2-FURO[3,2-D][1,3,2]DIOXAPHOSPHININE-2,7-DIOL, cAMP-dependent protein kinase type I-alpha regulatory chain
Authors:Wu, J, Jones, J.M, Xuong, N.H, Taylor, S.S.
Deposit date:2002-12-10
Release date:2004-01-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of RIalpha Subunit of Cyclic Adenosine 5'-Monophosphate (cAMP)-Dependent Protein Kinase Complexed with (R(p))-Adenosine 3',5'-Cyclic Monophosphothioate and (S(p))-Adenosine 3',5'-Cyclic Monophosphothioate, the Phosphothioate Analogues of cAMP.
Biochemistry, 43, 2004
3GH8
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BU of 3gh8 by Molmil
Crystal structure of Mus musculus iodotyrosine deiodinase (IYD) bound to FMN and di-iodotyrosine (DIT)
Descriptor: 3,5-DIIODOTYROSINE, FLAVIN MONONUCLEOTIDE, Iodotyrosine dehalogenase 1, ...
Authors:Thomas, S.R, McTamney, P.M, Adler, J.M, LaRonde-LeBlanc, N, Rokita, S.E.
Deposit date:2009-03-03
Release date:2009-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Crystal structure of iodotyrosine deiodinase, a novel flavoprotein responsible for iodide salvage in thyroid glands.
J.Biol.Chem., 284, 2009
2EVA
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BU of 2eva by Molmil
Structural Basis for the Interaction of TAK1 Kinase with its Activating Protein TAB1
Descriptor: ADENOSINE, TAK1 kinase - TAB1 chimera fusion protein
Authors:Brown, K, Vial, S.C, Dedi, N, Long, J.M, Dunster, N.J, Cheetham, G.M.
Deposit date:2005-10-31
Release date:2006-05-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the interaction of TAK1 kinase with its activating protein TAB1
J.Mol.Biol., 354, 2005
3P6F
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BU of 3p6f by Molmil
Human adipocyte lipid-binding protein FABP4 in complex with (S)-3-phenyl butyric acid
Descriptor: (3S)-3-phenylbutanoic acid, Fatty acid-binding protein, adipocyte
Authors:Gonzalez, J.M, Pozharski, E.
Deposit date:2010-10-11
Release date:2011-04-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural analysis of ibuprofen binding to human adipocyte fatty-acid binding protein (FABP4).
Acta Crystallogr F Struct Biol Commun, 71, 2015
2FH7
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BU of 2fh7 by Molmil
Crystal structure of the phosphatase domains of human PTP SIGMA
Descriptor: Receptor-type tyrosine-protein phosphatase S
Authors:Alvarado, J, Udupi, R, Smith, D, Koss, J, Wasserman, S.R, Ozyurt, S, Atwell, S, Powell, A, Kearins, M.C, Rooney, I, Maletic, M, Bain, K.T, Freeman, J.C, Russell, M, Thompson, D.A, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-12-23
Release date:2006-01-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural genomics of protein phosphatases.
J.STRUCT.FUNCT.GENOM., 8, 2007
3GHY
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BU of 3ghy by Molmil
Crystal structure of a putative ketopantoate reductase from Ralstonia solanacearum MolK2
Descriptor: Ketopantoate reductase protein
Authors:Patskovsky, Y, Ramagopal, U.A, Toro, R, Morano, C, Freeman, J, Chang, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-03-04
Release date:2009-03-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a putative ketopantoate reductase from Ralstonia solanacearum MolK2
To be Published
3P6C
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BU of 3p6c by Molmil
Human adipocyte lipid-binding protein FABP4 in complex with citric acid
Descriptor: CITRIC ACID, Fatty acid-binding protein, adipocyte
Authors:Gonzalez, J.M, Pozharski, E.
Deposit date:2010-10-11
Release date:2011-04-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural analysis of ibuprofen binding to human adipocyte fatty-acid binding protein (FABP4).
Acta Crystallogr F Struct Biol Commun, 71, 2015
3LK5
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BU of 3lk5 by Molmil
Crystal structure of putative Geranylgeranyl pyrophosphate synthase from Corynebacterium glutamicum
Descriptor: GLYCEROL, Geranylgeranyl pyrophosphate synthase
Authors:Malashkevich, V.N, Toro, R, Patskovsky, Y, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-01-27
Release date:2010-03-09
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of putative Geranylgeranyl pyrophosphate synthase from Corynebacterium glutamicum Atcc 13032
To be Published
3CRN
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BU of 3crn by Molmil
Crystal structure of response regulator receiver domain protein (CheY-like) from Methanospirillum hungatei JF-1
Descriptor: GLYCEROL, Response regulator receiver domain protein, CheY-like, ...
Authors:Hiner, R.L, Toro, R, Patskovsky, Y, Freeman, J, Chang, S, Smith, D, Groshong, C, Wasserman, S.R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-04-07
Release date:2008-04-22
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal structure of response regulator receiver domain protein (CheY-like) from Methanospirillum hungatei JF-1.
To be Published
4BZZ
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BU of 4bzz by Molmil
Complete crystal structure of carboxylesterase Cest-2923 from Lactobacillus plantarum WCFS1
Descriptor: ACETATE ION, ACETONITRILE, LIPASE/ESTERASE, ...
Authors:Benavente, R, Esteban-Torres, M, Acebron, I, de las Rivas, B, Munoz, R, Alvarez, Y, Mancheno, J.M.
Deposit date:2013-07-30
Release date:2013-10-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure, Biochemical Characterization and Analysis of the Pleomorphism of Carboxylesterase Cest-2923 from Lactobacillus Plantarum Wcfs1
FEBS J., 280, 2013
4C08
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BU of 4c08 by Molmil
Crystal structure of M. musculus protein arginine methyltransferase PRMT6 with CaCl2 at 1.34 Angstroms
Descriptor: CALCIUM ION, PENTAETHYLENE GLYCOL, PROTEIN ARGININE N-METHYLTRANSFERASE 6
Authors:Bonnefond, L, Cura, V, Troffer-Charlier, N, Mailliot, J, Wurtz, J.M, Cavarelli, J.
Deposit date:2013-07-31
Release date:2014-07-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.338 Å)
Cite:Functional Insights from High Resolution Structures of Mouse Protein Arginine Methyltransferase 6.
J.Struct.Biol., 191, 2015

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PDB entries from 2024-08-28

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