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PDB: 2437 results

7BVP
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BU of 7bvp by Molmil
AdhE spirosome in extended conformation
Descriptor: Aldehyde-alcohol dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:Kim, G.J, Song, J.J.
Deposit date:2020-04-11
Release date:2020-06-24
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Aldehyde-alcohol dehydrogenase undergoes structural transition to form extended spirosomes for substrate channeling.
Commun Biol, 3, 2020
7ML1
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BU of 7ml1 by Molmil
RNA polymerase II pre-initiation complex (PIC2)
Descriptor: BJ4_G0050160.mRNA.1.CDS.1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB3, ...
Authors:Yang, C, Fujiwara, R, Kim, H.J, Gorbea Colon, J.J, Steimle, S, Garcia, B.A, Murakami, K.
Deposit date:2021-04-27
Release date:2022-02-02
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II.
Mol.Cell, 82, 2022
7ML3
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General transcription factor TFIIH (weak binding)
Descriptor: BJ4_G0050160.mRNA.1.CDS.1, General transcription and DNA repair factor IIH, General transcription and DNA repair factor IIH helicase subunit XPB, ...
Authors:Yang, C, Fujiwara, R, Kim, H.J, Gorbea Colon, J.J, Steimle, S, Garcia, B.A, Murakami, K.
Deposit date:2021-04-27
Release date:2022-02-02
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (7.6 Å)
Cite:Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II.
Mol.Cell, 82, 2022
1FE8
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BU of 1fe8 by Molmil
CRYSTAL STRUCTURE OF THE VON WILLEBRAND FACTOR A3 DOMAIN IN COMPLEX WITH A FAB FRAGMENT OF IGG RU5 THAT INHIBITS COLLAGEN BINDING
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CACODYLATE ION, IMMUNOGLOBULIN IGG RU5, ...
Authors:Bouma, B, Huizinga, E.G, Schiphorst, M.E, Sixma, J.J, Kroon, J, Gros, P.
Deposit date:2000-07-21
Release date:2001-04-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Identification of the collagen-binding site of the von Willebrand factor A3-domain.
J.Biol.Chem., 276, 2001
7ML4
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BU of 7ml4 by Molmil
RNA polymerase II initially transcribing complex (ITC)
Descriptor: BJ4_G0050160.mRNA.1.CDS.1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB3, ...
Authors:Yang, C, Fujiwara, R, Kim, H.J, Gorbea Colon, J.J, Steimle, S, Garcia, B.A, Murakami, K.
Deposit date:2021-04-27
Release date:2022-02-02
Last modified:2022-03-09
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II.
Mol.Cell, 82, 2022
7ML2
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BU of 7ml2 by Molmil
RNA polymerase II pre-initiation complex (PIC3)
Descriptor: BJ4_G0004860.mRNA.1.CDS.1, BJ4_G0050160.mRNA.1.CDS.1, DNA-directed RNA polymerase II subunit RPB11, ...
Authors:Yang, C, Fujiwara, R, Kim, H.J, Gorbea Colon, J.J, Steimle, S, Garcia, B.A, Murakami, K.
Deposit date:2021-04-27
Release date:2022-02-02
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II.
Mol.Cell, 82, 2022
7US3
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BU of 7us3 by Molmil
Structure of Putrescine N-hydroxylase Involved Complexed with NADP+
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Putrescine N-hydroxylase, ...
Authors:Tanner, J.J, Bogner, A.N.
Deposit date:2022-04-22
Release date:2022-11-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Kinetic and Structural Characterization of a Flavin-Dependent Putrescine N -Hydroxylase from Acinetobacter baumannii.
Biochemistry, 61, 2022
7TSR
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BU of 7tsr by Molmil
Room temperature rsEospa Cis-state structure at pH 8.4
Descriptor: Cis-state rsEospa
Authors:Baxter, J.M, van Thor, J.J.
Deposit date:2022-01-31
Release date:2022-11-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Observation of Cation Chromophore Photoisomerization of a Fluorescent Protein Using Millisecond Synchrotron Serial Crystallography and Infrared Vibrational and Visible Spectroscopy.
J.Phys.Chem.B, 126, 2022
4XDX
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BU of 4xdx by Molmil
The crystal structure of soluble human interleukin 8 expressed in Pichia pastoris
Descriptor: Interleukin-8
Authors:Ostrov, D.A, Pompeu, Y.A, Jakoncic, J.J.
Deposit date:2014-12-20
Release date:2015-12-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:The crystal structure of soluble human interleukin 8 expressed in Pichia pastoris
To Be Published
7TSU
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BU of 7tsu by Molmil
Room temperature rsEospa Cis-state structure at pH 5.5
Descriptor: Cis-state rsEospa
Authors:Baxter, J.M, van Thor, J.J.
Deposit date:2022-01-31
Release date:2022-12-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Observation of Cation Chromophore Photoisomerization of a Fluorescent Protein Using Millisecond Synchrotron Serial Crystallography and Infrared Vibrational and Visible Spectroscopy.
J.Phys.Chem.B, 126, 2022
3CKZ
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BU of 3ckz by Molmil
N1 Neuraminidase H274Y + Zanamivir
Descriptor: CALCIUM ION, Neuraminidase, ZANAMIVIR
Authors:Colllins, P, Haire, L.F, Lin, Y.P, Liu, J, Russell, R.J, Walker, P.A, Skehel, J.J, Martin, S.R, Hay, A.J, Gamblin, S.J.
Deposit date:2008-03-18
Release date:2008-05-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of oseltamivir-resistant influenza virus neuraminidase mutants.
Nature, 453, 2008
1NX9
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BU of 1nx9 by Molmil
Acetobacter turbidans alpha-amino acid ester hydrolase S205A mutant complexed with ampicillin
Descriptor: (2S,5R,6R)-6-{[(2R)-2-AMINO-2-PHENYLETHANOYL]AMINO}-3,3-DIMETHYL-7-OXO-4-THIA-1-AZABICYCLO[3.2.0]HEPTANE-2-CARBOXYLIC ACID, GLYCEROL, alpha-amino acid ester hydrolase
Authors:Barends, T.R.M, Polderman-Tijmes, J.J, Jekel, P.A, Janssen, D.B, Dijkstra, B.W.
Deposit date:2003-02-10
Release date:2004-03-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Acetobacter turbidans {alpha}-Amino Acid Ester Hydrolase: HOW A SINGLE MUTATION IMPROVES AN ANTIBIOTIC-PRODUCING ENZYME.
J.Biol.Chem., 281, 2006
4XBW
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BU of 4xbw by Molmil
R2-like ligand-binding oxidase with aerobically reconstituted dimanganese cofactor
Descriptor: MANGANESE (II) ION, PALMITIC ACID, Ribonucleotide reductase small subunit
Authors:Griese, J.J, Hogbom, M.
Deposit date:2014-12-17
Release date:2015-09-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.991 Å)
Cite:Structural Basis for Oxygen Activation at a Heterodinuclear Manganese/Iron Cofactor.
J.Biol.Chem., 290, 2015
4XCI
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BU of 4xci by Molmil
Crystal structure of a hexadecameric TF55 complex from S. solfataricus, crystal form II
Descriptor: Thermosome subunit alpha, Thermosome subunit beta
Authors:Stewart, A.G, Chaston, J.J, Smits, C, Stock, D.
Deposit date:2014-12-18
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.0023 Å)
Cite:Structural and Functional Insights into the Evolution and Stress Adaptation of Type II Chaperonins.
Structure, 24, 2016
4XBV
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BU of 4xbv by Molmil
R2-like ligand-binding oxidase with anaerobically reconstituted diiron cofactor
Descriptor: FE (II) ION, PALMITIC ACID, Ribonuleotide reductase small subunit
Authors:Griese, J.J, Hogbom, M.
Deposit date:2014-12-17
Release date:2015-09-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Structural Basis for Oxygen Activation at a Heterodinuclear Manganese/Iron Cofactor.
J.Biol.Chem., 290, 2015
1VKG
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BU of 1vkg by Molmil
Crystal Structure of Human HDAC8 complexed with CRA-19156
Descriptor: 5-(4-METHYL-BENZOYLAMINO)-BIPHENYL-3,4'-DICARBOXYLIC ACID 3-DIMETHYLAMIDE-4'-HYDROXYAMIDE, Histone deacetylase 8, SODIUM ION, ...
Authors:Somoza, J.R, Skene, R.J, Katz, B.A, Mol, C, Ho, J.D, Jennings, A.J, Luong, C, Arvai, A, Buggy, J.J, Chi, E, Tang, J, Sang, B.-C, Verner, E, Wynands, R, Leahy, E.M, Dougan, D.R, Snell, G, Navre, M, Knuth, M.W, Swanson, R.V, McRee, D.E, Tari, L.W.
Deposit date:2004-05-13
Release date:2004-07-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Snapshots of Human HDAC8 Provide Insights into the Class I Histone Deacetylases
Structure, 12, 2004
3EYJ
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BU of 3eyj by Molmil
Structure of Influenza Haemagglutinin in complex with an inhibitor of membrane fusion
Descriptor: Hemagglutinin HA1 chain, Hemagglutinin HA2 chain
Authors:Russell, R.J, Kerry, P.S, Stevens, D.J, Steinahuer, D.A, Martin, S.R, Gamblin, S.J, Skehel, J.J.
Deposit date:2008-10-21
Release date:2009-01-13
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of influenza hemagglutinin in complex with an inhibitor of membrane fusion
Proc.Natl.Acad.Sci.USA, 105, 2008
6ZNS
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BU of 6zns by Molmil
Crystal Structure of DUF1998 helicase MrfA
Descriptor: Uncharacterized ATP-dependent helicase YprA, ZINC ION
Authors:Roske, J.J, Liu, S, Loll, B, Neu, U, Wahl, M.C.
Deposit date:2020-07-06
Release date:2020-11-25
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.32 Å)
Cite:A skipping rope translocation mechanism in a widespread family of DNA repair helicases.
Nucleic Acids Res., 49, 2021
4XWF
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Crystal structure of the ZMP riboswitch at 1.80 angstrom
Descriptor: AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE, CACODYLATE ION, IRIDIUM HEXAMMINE ION, ...
Authors:Trausch, J.J, Batey, R.T.
Deposit date:2015-01-28
Release date:2015-09-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Metal Ion-Mediated Nucleobase Recognition by the ZTP Riboswitch.
Chem.Biol., 22, 2015
3EYK
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BU of 3eyk by Molmil
Structure of Influenza Haemagglutinin in complex with an inhibitor of membrane fusion
Descriptor: 2-tert-butylbenzene-1,4-diol, Hemagglutinin HA1 chain, Hemagglutinin HA2 chain
Authors:Russell, R.J, Kerry, P.S, Stevens, D.J, Steinhauer, D.A, Martin, S.R, Gamblin, S.J, Skehel, J.J.
Deposit date:2008-10-21
Release date:2009-01-13
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of influenza hemagglutinin in complex with an inhibitor of membrane fusion
Proc.Natl.Acad.Sci.USA, 105, 2008
5AJM
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BU of 5ajm by Molmil
H5 (VN1194) Asn186Lys Mutant Haemagglutinin in Complex with Avian Receptor Analogue 3'SLN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, ...
Authors:Xiong, X, Xiao, H, Martin, S.R, Coombs, P.J, Liu, J, Collins, P.J, Vachieri, S.G, Walker, P.A, Lin, Y.P, McCauley, J.W, Gamblin, S.J, Skehel, J.J.
Deposit date:2015-02-25
Release date:2015-03-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Enhanced Human Receptor Binding by H5 Haemagglutinins.
Virology, 456, 2014
6ZNP
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BU of 6znp by Molmil
Crystal Structure of DUF1998 helicase MrfA bound to DNA
Descriptor: CITRIC ACID, Uncharacterized ATP-dependent helicase YprA, ZINC ION, ...
Authors:Roske, J.J, Liu, S, Loll, B, Neu, U, Wahl, M.C.
Deposit date:2020-07-06
Release date:2020-11-25
Last modified:2021-01-20
Method:X-RAY DIFFRACTION (3.16 Å)
Cite:A skipping rope translocation mechanism in a widespread family of DNA repair helicases.
Nucleic Acids Res., 49, 2021
6ZNQ
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BU of 6znq by Molmil
Crystal Structure of DUF1998 helicase MrfA bound to DNA and AMPPNP
Descriptor: CITRIC ACID, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Uncharacterized ATP-dependent helicase YprA, ...
Authors:Roske, J.J, Liu, S, Loll, B, Neu, U, Wahl, M.C.
Deposit date:2020-07-06
Release date:2020-11-25
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.34 Å)
Cite:A skipping rope translocation mechanism in a widespread family of DNA repair helicases.
Nucleic Acids Res., 49, 2021
6ZRK
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BU of 6zrk by Molmil
Crystal structure of H8 haemagglutinin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
Authors:Xiong, X, Walker, P, Zhang, J, Gamblin, S, Skehel, J.J.
Deposit date:2020-07-13
Release date:2020-12-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Hemagglutinin Structure and Activities.
Cold Spring Harb Perspect Med, 11, 2021
4XW7
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BU of 4xw7 by Molmil
Crystal structure of the ZMP riboswitch at 2.50 angstrom
Descriptor: AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE, IRIDIUM HEXAMMINE ION, MAGNESIUM ION, ...
Authors:Trausch, J.J, Batey, R.T.
Deposit date:2015-01-28
Release date:2015-09-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Metal Ion-Mediated Nucleobase Recognition by the ZTP Riboswitch.
Chem.Biol., 22, 2015

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