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PDB: 2408 results

5I2L
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BU of 5i2l by Molmil
Structure of EF-hand containing protein
Descriptor: CALCIUM ION, EF-hand domain-containing protein D2
Authors:Park, K.R, Kwon, M.S, An, J.Y, Lee, J.G, Youn, H.S, Lee, Y, Kang, J.Y, Kim, T.G, Lim, J.J, Park, J.S, Lee, S.H, Song, W.K, Cheong, H, Jun, C, Eom, S.H.
Deposit date:2016-02-09
Release date:2016-12-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural implications of Ca(2+)-dependent actin-bundling function of human EFhd2/Swiprosin-1.
Sci Rep, 6, 2016
2XM8
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Co-crystal structure of a small molecule inhibitor bound to the kinase domain of Chk2
Descriptor: 2-{4-[(3S)-PYRROLIDIN-3-YLAMINO]QUINAZOLIN-2-YL}PHENOL, SERINE/THREONINE-PROTEIN KINASE CHK2
Authors:Caldwell, J.J, Welsh, E.J, Matijssen, C, Anderson, V.E, Antoni, L, Boxall, K, Urban, F, Hayes, A, Raynaud, F.I, Rigoreau, L.J, Raynham, T, Aherne, G.W, Pearl, L.H, Oliver, A.W, Garrett, M.D, Collins, I.
Deposit date:2010-07-26
Release date:2011-01-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structure-Based Design of Potent and Selective 2-(Quinazolin-2-Yl)Phenol Inhibitors of Checkpoint Kinase 2.
J.Med.Chem., 54, 2011
2BFW
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BU of 2bfw by Molmil
Structure of the C domain of glycogen synthase from Pyrococcus abyssi
Descriptor: ACETATE ION, GLGA GLYCOGEN SYNTHASE, SULFATE ION
Authors:Horcajada, C, Guinovart, J.J, Fita, I, Ferrer, J.C.
Deposit date:2004-12-15
Release date:2005-11-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of an Archaeal Glycogen Synthase: Insights Into Oligomerisation and Substrate Binding of Eukaryotic Glycogen Synthases.
J.Biol.Chem., 281, 2006
2XP2
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BU of 2xp2 by Molmil
Structure of the Human Anaplastic Lymphoma Kinase in Complex with Crizotinib (PF-02341066)
Descriptor: 3-[(1R)-1-(2,6-dichloro-3-fluorophenyl)ethoxy]-5-(1-piperidin-4-yl-1H-pyrazol-4-yl)pyridin-2-amine, TYROSINE-PROTEIN KINASE RECEPTOR
Authors:McTigue, M, Deng, Y, Liu, W, Brooun, A, Timofeevski, S, Marrone, T, Cui, J.J.
Deposit date:2010-08-24
Release date:2010-09-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure Based Drug Design of Crizotinib (Pf-02341066), a Potent and Selective Dual Inhibitor of Mesenchymal-Epithelial Transition Factor (C-met) Kinase and Anaplastic Lymphoma Kinase (Alk).
J.Med.Chem, 54, 2011
6F6L
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R2-like ligand-binding oxidase Y162F mutant with aerobically reconstituted Mn/Fe cofactor
Descriptor: FE (III) ION, MANGANESE (II) ION, MANGANESE (III) ION, ...
Authors:Griese, J.J, Hogbom, M.
Deposit date:2017-12-05
Release date:2018-12-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.904 Å)
Cite:Assembly of a heterodinuclear Mn/Fe cofactor is coupled to tyrosine-valine ether cross-link formation in the R2-like ligand-binding oxidase.
J. Biol. Inorg. Chem., 24, 2019
5IAG
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BU of 5iag by Molmil
Caspase 3 V266Q
Descriptor: ACE-ASP-GLU-VAL-ASK, ASP-ASP-ASP-MET, Caspase-3
Authors:Maciag, J.J, Mackenzie, S.H, Tucker, M.B, Schipper, J.L, Swartz, P.D, Clark, A.C.
Deposit date:2016-02-21
Release date:2016-10-26
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Tunable allosteric library of caspase-3 identifies coupling between conserved water molecules and conformational selection.
Proc.Natl.Acad.Sci.USA, 113, 2016
1F14
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BU of 1f14 by Molmil
L-3-HYDROXYACYL-COA DEHYDROGENASE (APO)
Descriptor: L-3-HYDROXYACYL-COA DEHYDROGENASE
Authors:Barycki, J.J, O'Brien, L.K, Strauss, A.W, Banaszak, L.J.
Deposit date:2000-05-18
Release date:2000-09-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Sequestration of the active site by interdomain shifting. Crystallographic and spectroscopic evidence for distinct conformations of L-3-hydroxyacyl-CoA dehydrogenase.
J.Biol.Chem., 275, 2000
6F6G
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BU of 6f6g by Molmil
R2-like ligand-binding oxidase V72I mutant with anaerobically reconstituted Mn/Fe cofactor
Descriptor: FE (II) ION, MANGANESE (II) ION, PALMITIC ACID, ...
Authors:Griese, J.J, Hogbom, M.
Deposit date:2017-12-05
Release date:2018-07-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.991 Å)
Cite:Ether cross-link formation in the R2-like ligand-binding oxidase.
J. Biol. Inorg. Chem., 23, 2018
1I8N
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BU of 1i8n by Molmil
CRYSTAL STRUCTURE OF LEECH ANTI-PLATELET PROTEIN
Descriptor: ANTI-PLATELET PROTEIN, PROPIONAMIDE
Authors:Huizinga, E.G, Schouten, A, Connolly, T.M, Kroon, J, Sixma, J.J, Gros, P.
Deposit date:2001-03-15
Release date:2001-08-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structure of leech anti-platelet protein, an inhibitor of haemostasis.
Acta Crystallogr.,Sect.D, 57, 2001
6F6B
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BU of 6f6b by Molmil
R2-like ligand-binding oxidase A171F mutant with anaerobically reconstituted Mn/Fe cofactor
Descriptor: FE (II) ION, MANGANESE (II) ION, Ribonucleotide reductase small subunit
Authors:Griese, J.J, Hogbom, M.
Deposit date:2017-12-05
Release date:2018-12-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.009 Å)
Cite:Assembly of a heterodinuclear Mn/Fe cofactor is coupled to tyrosine-valine ether cross-link formation in the R2-like ligand-binding oxidase.
J. Biol. Inorg. Chem., 24, 2019
1IC9
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BU of 1ic9 by Molmil
NMR SOLUTION STRUCTURE OF THE DESIGNED BETA-SHEET MINI-PROTEIN TH10AOX
Descriptor: TH10AOX
Authors:Ottesen, J.J, Imperiali, B.
Deposit date:2001-03-30
Release date:2001-04-11
Last modified:2020-06-24
Method:SOLUTION NMR
Cite:Design of a discretely folded mini-protein motif with predominantly beta-structure.
Nat.Struct.Biol., 8, 2001
5ID3
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BU of 5id3 by Molmil
Solution structure of the pore-forming region of C. elegans Mitochondrial Calcium Uniporter (MCU)
Descriptor: Mitochondrial Calcium Uniporter
Authors:Oxenoid, K, Dong, Y, Cao, C, Cui, T, Sancak, Y, Markhard, A.L, Grabarek, Z, Kong, L, Liu, Z, Ouyang, B, Cong, Y, Mootha, V.K, Chou, J.J, Membrane Protein Structures by Solution NMR (MPSbyNMR)
Deposit date:2016-02-23
Release date:2016-05-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Architecture of the mitochondrial calcium uniporter.
Nature, 533, 2016
2VBE
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BU of 2vbe by Molmil
Tailspike protein of bacteriophage Sf6
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, MANGANESE (II) ION, ...
Authors:Barbirz, S, Mueller, J.J, Freiberg, A, Heinemann, U, Seckler, R.
Deposit date:2007-09-12
Release date:2008-04-22
Last modified:2019-04-03
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:An intersubunit active site between supercoiled parallel beta helices in the trimeric tailspike endorhamnosidase of Shigella flexneri Phage Sf6.
Structure, 16, 2008
5IV1
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BU of 5iv1 by Molmil
Solution Structure of DNA Dodecamer with 8-oxoguanine at 4th Position
Descriptor: DNA (5'-D(*CP*GP*CP*(8OG)P*AP*AP*TP*TP*CP*GP*CP*G)-3')
Authors:Miears, H.L, Gruber, D.R, Hoppins, J.J, Kiryutin, A.S, Kasymov, R.D, Yurkovskaya, A.V, Zharkov, D.O, Smirnov, S.L.
Deposit date:2016-03-18
Release date:2016-07-27
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:8-Oxoguanine Affects DNA Backbone Conformation in the EcoRI Recognition Site and Inhibits Its Cleavage by the Enzyme.
Plos One, 11, 2016
6BDE
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BU of 6bde by Molmil
Crystal structure of Fe(II) unliganded H-NOX protein mutant A71G from K. algicida
Descriptor: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Bruegger, J.J, Hespen, C.W, Marletta, M.A.
Deposit date:2017-10-22
Release date:2018-05-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.641 Å)
Cite:Native Alanine Substitution in the Glycine Hinge Modulates Conformational Flexibility of Heme Nitric Oxide/Oxygen (H-NOX) Sensing Proteins.
ACS Chem. Biol., 13, 2018
6F6E
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BU of 6f6e by Molmil
R2-like ligand-binding oxidase V72A mutant with anaerobically reconstituted Mn/Fe cofactor
Descriptor: FE (II) ION, MANGANESE (II) ION, PALMITIC ACID, ...
Authors:Griese, J.J, Hogbom, M.
Deposit date:2017-12-05
Release date:2018-07-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.627 Å)
Cite:Ether cross-link formation in the R2-like ligand-binding oxidase.
J. Biol. Inorg. Chem., 23, 2018
2XBJ
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BU of 2xbj by Molmil
Crystal Structure of Chk2 in complex with an inhibitor
Descriptor: 4-FLUORO-2-(4-{[(3S,4R)-4-(1-HYDROXY-1-METHYLETHYL)PYRROLIDIN-3-YL]AMINO}-6,7-DIMETHOXYQUINAZOLIN-2-YL)PHENOL, MAGNESIUM ION, NITRATE ION, ...
Authors:Anderson, V.E, Walton, M.I, Eve, P.D, Caldwell, J.J, Pearl, L.H, Oliver, A.W, Collins, I, Garrett, M.D.
Deposit date:2010-04-12
Release date:2011-01-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-Based Design of Potent and Selective 2-(Quinazolin-2-Yl)Phenol Inhibitors of Checkpoint Kinase 2.
J.Med.Chem., 54, 2011
5J9A
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BU of 5j9a by Molmil
Ambient temperature transition state structure of arginine kinase - crystal 11/Form II
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ARGININE, Arginine kinase, ...
Authors:Godsey, M, Davulcu, O, Nix, J, Skalicky, J.J, Bruschweiler, R, Chapman, M.S.
Deposit date:2016-04-08
Release date:2016-08-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:The Sampling of Conformational Dynamics in Ambient-Temperature Crystal Structures of Arginine Kinase.
Structure, 24, 2016
2XM9
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BU of 2xm9 by Molmil
Structure of a small molecule inhibitor with the kinase domain of Chk2
Descriptor: 4-(1H-pyrazol-5-yl)-2-{4-[(3S)-pyrrolidin-3-ylamino]quinazolin-2-yl}phenol, NITRATE ION, SERINE/THREONINE-PROTEIN KINASE CHK2
Authors:Caldwell, J.J, Welsh, E.J, Matijssen, C, Anderson, V.E, Antoni, L, Boxall, K, Urban, F, Hayes, A, Raynaud, F.I, Rigoreau, L.J, Raynham, T, Aherne, G.W, Pearl, L.H, Oliver, A.W, Garrett, M.D, Collins, I.
Deposit date:2010-07-26
Release date:2011-01-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-Based Design of Potent and Selective 2-(Quinazolin-2-Yl)Phenol Inhibitors of Checkpoint Kinase 2.
J.Med.Chem., 54, 2011
2BIS
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BU of 2bis by Molmil
Structure of glycogen synthase from Pyrococcus abyssi
Descriptor: 1,4-DIETHYLENE DIOXIDE, GLGA GLYCOGEN SYNTHASE, GLYCEROL, ...
Authors:Horcajada, C, Guinovart, J.J, Fita, I, Ferrer, J.C.
Deposit date:2005-01-25
Release date:2005-11-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of an Archaeal Glycogen Synthase: Insights Into Oligomerisation and Substrate Binding of Eukaryotic Glycogen Synthases.
J.Biol.Chem., 281, 2006
2XKW
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BU of 2xkw by Molmil
LIGAND BINDING DOMAIN OF HUMAN PPAR-GAMMA IN COMPLEX WITH THE AGONIST PIOGLITAZONE
Descriptor: (5R)-5-{4-[2-(5-ethylpyridin-2-yl)ethoxy]benzyl}-1,3-thiazolidine-2,4-dione, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Mueller, J.J, Schupp, M, Unger, T, Kintscher, U, Heinemann, U.
Deposit date:2010-07-14
Release date:2011-08-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Binding Diversity of Pioglitazone by Peroxisome Proliferator-Activated Receptor-Gamma
To be Published
2BID
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BU of 2bid by Molmil
HUMAN PRO-APOPTOTIC PROTEIN BID
Descriptor: PROTEIN (BID)
Authors:Chou, J.J, Li, H, Salvesen, G.S, Yuan, J, Wagner, G.
Deposit date:1999-01-27
Release date:2000-02-02
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of BID, an intracellular amplifier of apoptotic signaling.
Cell(Cambridge,Mass.), 96, 1999
1FE8
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BU of 1fe8 by Molmil
CRYSTAL STRUCTURE OF THE VON WILLEBRAND FACTOR A3 DOMAIN IN COMPLEX WITH A FAB FRAGMENT OF IGG RU5 THAT INHIBITS COLLAGEN BINDING
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CACODYLATE ION, IMMUNOGLOBULIN IGG RU5, ...
Authors:Bouma, B, Huizinga, E.G, Schiphorst, M.E, Sixma, J.J, Kroon, J, Gros, P.
Deposit date:2000-07-21
Release date:2001-04-04
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Identification of the collagen-binding site of the von Willebrand factor A3-domain.
J.Biol.Chem., 276, 2001
4LVW
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BU of 4lvw by Molmil
Structure of the THF riboswitch bound to 7-deazaguanine
Descriptor: 7-DEAZAGUANINE, THF riboswitch
Authors:Trausch, J.J, Batey, R.T.
Deposit date:2013-07-26
Release date:2014-03-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.768 Å)
Cite:A Disconnect between High-Affinity Binding and Efficient Regulation by Antifolates and Purines in the Tetrahydrofolate Riboswitch.
Chem.Biol., 21, 2014
6BDD
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BU of 6bdd by Molmil
Crystal structure of Fe(II) unliganded H-NOX protein from K. algicida
Descriptor: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Bruegger, J.J, Hespen, C.W, Marletta, M.A.
Deposit date:2017-10-22
Release date:2018-05-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Native Alanine Substitution in the Glycine Hinge Modulates Conformational Flexibility of Heme Nitric Oxide/Oxygen (H-NOX) Sensing Proteins.
ACS Chem. Biol., 13, 2018

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