Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 2523 results

7ART
DownloadVisualize
BU of 7art by Molmil
48 helix bundle DNA origami brick
Descriptor: SCAFFOLD STRAND, STAPLE STRAND
Authors:Feigl, E, Kube, M, Kohler, F, Nagel-Yuksel, B, Willner, E.M, Funke, J.J, Gerling, T, Stommer, P, Honemann, M.N, Martin, T.G, Scheres, S.H.W, Dietz, H.
Deposit date:2020-10-26
Release date:2020-11-11
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (10 Å)
Cite:Revealing the structures of megadalton-scale DNA complexes with nucleotide resolution.
Nat Commun, 11, 2020
3BBA
DownloadVisualize
BU of 3bba by Molmil
Structure of active wild-type Prevotella intermedia interpain A cysteine protease
Descriptor: interpain A
Authors:Mallorqui-Fernandez, N, Manandhar, S.P, Mallorqui-Fernandez, G, Uson, I, Wawrzonek, K, Kantyka, T, Sola, M, Thogersen, I.B, Enghild, J.J, Potempa, J, Gomis-Ruth, F.X.
Deposit date:2007-11-09
Release date:2007-11-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:A New Autocatalytic Activation Mechanism for Cysteine Proteases Revealed by Prevotella intermedia Interpain A
J.Biol.Chem., 283, 2008
4GP3
DownloadVisualize
BU of 4gp3 by Molmil
The crystal structure of human fascin 1 K358A mutant
Descriptor: BROMIDE ION, CHLORIDE ION, Fascin, ...
Authors:Yang, S.Y, Huang, F.K, Huang, J, Chen, S, Jakoncic, J, Leo-Macias, A, Diaz-Avalos, R, Chen, L, Zhang, J.J, Huang, X.Y.
Deposit date:2012-08-20
Release date:2012-11-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Molecular mechanism of fascin function in filopodial formation.
J.Biol.Chem., 288, 2013
2EHO
DownloadVisualize
BU of 2eho by Molmil
Crystal structure of human GINS complex
Descriptor: DNA replication complex GINS protein PSF1, DNA replication complex GINS protein PSF2, GINS complex subunit 3, ...
Authors:Choi, J.M, Lim, H.S, Kim, J.J, Song, O.K, Cho, Y.
Deposit date:2007-03-07
Release date:2007-06-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of the human GINS complex
Genes Dev., 21, 2007
7CIX
DownloadVisualize
BU of 7cix by Molmil
Crystal Structure of Agmatine N-Acetyltransferase mutant S171A in complex with CoA
Descriptor: Agmatine N-acetyltransferase, COENZYME A
Authors:Chen, J.J, Hu, I.C, Wu, C.Y, Lyu, P.C.
Deposit date:2020-07-08
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.748 Å)
Cite:Crystal Structure of Agmatine N-Acetyltransferase mutant S171A in complex with CoA
To Be Published
7CIW
DownloadVisualize
BU of 7ciw by Molmil
Crystal Structure of Agmatine N-Acetyltransferase mutant S171A in complex with Ac-Agm and CoA
Descriptor: Agmatine N-acetyltransferase, COENZYME A, N-(4-carbamimidamidobutyl)ethanamide
Authors:Chen, J.J, Hu, I.C, Wu, C.Y, Lyu, P.C.
Deposit date:2020-07-08
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of Agmatine N-Acetyltransferase mutant S171A in complex with Ac-Agm and CoA
To Be Published
7CIU
DownloadVisualize
BU of 7ciu by Molmil
Crystal Structure of Agmatine N-Acetyltransferase mutant S171A apo form
Descriptor: Agmatine N-acetyltransferase
Authors:Chen, J.J, Hu, I.C, Lai, C.H, Lyu, P.C.
Deposit date:2020-07-08
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.825 Å)
Cite:Crystal Structure of Agmatine N-Acetyltransferase mutant S171A
To Be Published
2AK4
DownloadVisualize
BU of 2ak4 by Molmil
Crystal Structure of SB27 TCR in complex with HLA-B*3508-13mer peptide
Descriptor: Beta-2-microglobulin, EBV peptide LPEPLPQGQLTAY, HLA-B35 variant, ...
Authors:Tynan, F.E, Burrows, S.R, Buckle, A.M, Clements, C.S, Borg, N.A, Miles, J.J, Beddoe, T, Whisstock, J.C, Wilce, M.C, Silins, S.L, Burrows, J.M, Kjer-Nielsen, L, Konstenko, L, Purcell, A.W, McCluskey, J, Rossjohn, J.
Deposit date:2005-08-03
Release date:2005-10-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:T cell receptor recognition of a 'super-bulged' major histocompatibility complex class I-bound peptide
Nat.Immunol., 6, 2005
7CIV
DownloadVisualize
BU of 7civ by Molmil
Crystal Structure of Agmatine N-Acetyltransferase mutant S171A in complex with Ac-CoA
Descriptor: ACETYL COENZYME *A, Agmatine N-acetyltransferase
Authors:Chen, J.J, Hu, I.C, Lai, C.H, Lyu, P.C.
Deposit date:2020-07-08
Release date:2021-08-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.848 Å)
Cite:Crystal Structure of Agmatine N-Acetyltransferase mutant S171A in complex with Ac-CoA
To Be Published
2B37
DownloadVisualize
BU of 2b37 by Molmil
Crystal structure of Mycobacterium tuberculosis enoyl reductase (InhA) inhibited by 5-octyl-2-phenoxyphenol
Descriptor: 5-OCTYL-2-PHENOXYPHENOL, Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Sullivan, T.J, Truglio, J.J, Novichenok, P, Stratton, C, Zhang, X, Kaur, T, Johnson, F, Boyne, M.S, Amin, A.
Deposit date:2005-09-19
Release date:2006-03-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:High Affinity InhA Inhibitors with Activity against Drug-Resistant Strains of Mycobacterium tuberculosis
ACS Chem.Biol., 1, 2006
5WAH
DownloadVisualize
BU of 5wah by Molmil
SOLUTION NMR STRUCTURE OF SIGLEC-5 BINDING DOMAIN FROM STREPTOCOCCAL BETA PROTEIN
Descriptor: IgA FC receptor
Authors:ELETSKY, A, CHEN, C, FONG, J.J, NIZET, V, VARKI, A, PRESTEGARD, J.H.
Deposit date:2017-06-26
Release date:2018-06-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:SOLUTION NMR STRUCTURE OF SIGLEC-5 BINDING DOMAIN FROM STREPTOCOCCAL BETA PROTEIN
To Be Published
4I55
DownloadVisualize
BU of 4i55 by Molmil
Crystal structure of tubulin-stathmin-TTL complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Prota, A.E, Bargsten, K, Zurwerra, D, Field, J.J, Diaz, J.F, Altmann, K.H, Steinmetz, M.O.
Deposit date:2012-11-28
Release date:2013-01-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular Mechanism of Action of Microtubule-Stabilizing Anticancer Agents.
Science, 339, 2013
7TSR
DownloadVisualize
BU of 7tsr by Molmil
Room temperature rsEospa Cis-state structure at pH 8.4
Descriptor: Cis-state rsEospa
Authors:Baxter, J.M, van Thor, J.J.
Deposit date:2022-01-31
Release date:2022-11-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Observation of Cation Chromophore Photoisomerization of a Fluorescent Protein Using Millisecond Synchrotron Serial Crystallography and Infrared Vibrational and Visible Spectroscopy.
J.Phys.Chem.B, 126, 2022
4ICN
DownloadVisualize
BU of 4icn by Molmil
Dihydrodipicolinate synthase from shewanella benthica
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, DIHYDRODIPICOLINATE SYNTHASE, ...
Authors:Wubben, J.M, Paxman, J.J, Dogovski, C, Parker, M.W, Perugini, M.A.
Deposit date:2012-12-10
Release date:2013-12-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Cold enzymology offers insight into molecular evolution in quaternary structure
To be Published
7TSU
DownloadVisualize
BU of 7tsu by Molmil
Room temperature rsEospa Cis-state structure at pH 5.5
Descriptor: Cis-state rsEospa
Authors:Baxter, J.M, van Thor, J.J.
Deposit date:2022-01-31
Release date:2022-12-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Observation of Cation Chromophore Photoisomerization of a Fluorescent Protein Using Millisecond Synchrotron Serial Crystallography and Infrared Vibrational and Visible Spectroscopy.
J.Phys.Chem.B, 126, 2022
7TSS
DownloadVisualize
BU of 7tss by Molmil
Room temperature rsEospa Trans-state structure at pH 8.4
Descriptor: Trans-state rsEospa
Authors:Baxter, J.M, van Thor, J.J.
Deposit date:2022-01-31
Release date:2022-12-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Observation of Cation Chromophore Photoisomerization of a Fluorescent Protein Using Millisecond Synchrotron Serial Crystallography and Infrared Vibrational and Visible Spectroscopy.
J.Phys.Chem.B, 126, 2022
4GDE
DownloadVisualize
BU of 4gde by Molmil
Crystal structure of NADPH-reduced Aspergillus fumigatus UDP-galactopyranose
Descriptor: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, SULFATE ION, UDP-galactopyranose mutase
Authors:Tanner, J.J, Dhatwalia, R.D, Singh, H.
Deposit date:2012-07-31
Release date:2012-10-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Identification of the NAD(P)H Binding Site of Eukaryotic UDP-Galactopyranose Mutase.
J.Am.Chem.Soc., 134, 2012
4GGK
DownloadVisualize
BU of 4ggk by Molmil
Crystal structure of Zucchini from mouse (mZuc / PLD6 / MitoPLD) bound to tungstate
Descriptor: Mitochondrial cardiolipin hydrolase, TUNGSTATE(VI)ION, ZINC ION
Authors:Ipsaro, J.J, Haase, A.D, Hannon, G.J, Joshua-Tor, L.
Deposit date:2012-08-06
Release date:2012-10-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structural biochemistry of Zucchini implicates it as a nuclease in piRNA biogenesis.
Nature, 491, 2012
6UFP
DownloadVisualize
BU of 6ufp by Molmil
Structure of proline utilization A with the FAD covalently modified by L-thiazolidine-2-carboxylate and three cysteines (Cys46, Cys470, Cys638) modified to S,S-(2-HYDROXYETHYL)THIOCYSTEINE
Descriptor: (2S)-1,3-thiazolidine-2-carboxylic acid, Bifunctional protein PutA, DI(HYDROXYETHYL)ETHER, ...
Authors:Campbell, A.C, Tanner, J.J.
Deposit date:2019-09-24
Release date:2020-03-18
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.737 Å)
Cite:Covalent Modification of the Flavin in Proline Dehydrogenase by Thiazolidine-2-Carboxylate.
Acs Chem.Biol., 15, 2020
7UIC
DownloadVisualize
BU of 7uic by Molmil
Mediator-PIC Early (Tail A)
Descriptor: Mediator of RNA polymerase II transcription subunit 14, Mediator of RNA polymerase II transcription subunit 15, Mediator of RNA polymerase II transcription subunit 16, ...
Authors:Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K.
Deposit date:2022-03-29
Release date:2023-02-15
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis of a transcription pre-initiation complex on a divergent promoter.
Mol.Cell, 83, 2023
5UR2
DownloadVisualize
BU of 5ur2 by Molmil
Crystal structure of proline utilization A (PutA) from Bdellovibrio bacteriovorus inactivated by N-propargylglycine
Descriptor: Bifunctional protein PutA, N-propargylglycine-modified flavin adenine dinucleotide
Authors:Tanner, J.J.
Deposit date:2017-02-09
Release date:2017-08-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Biophysical investigation of type A PutAs reveals a conserved core oligomeric structure.
FEBS J., 284, 2017
7UIL
DownloadVisualize
BU of 7uil by Molmil
Mediator-PIC Early (Tail A/B Dimer)
Descriptor: Mediator of RNA polymerase II transcription subunit 1, Mediator of RNA polymerase II transcription subunit 14, Mediator of RNA polymerase II transcription subunit 15, ...
Authors:Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K.
Deposit date:2022-03-29
Release date:2023-02-15
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structural basis of a transcription pre-initiation complex on a divergent promoter.
Mol.Cell, 83, 2023
7UIF
DownloadVisualize
BU of 7uif by Molmil
Mediator-PIC Early (Core B)
Descriptor: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
Authors:Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K.
Deposit date:2022-03-29
Release date:2023-02-15
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structural basis of a transcription pre-initiation complex on a divergent promoter.
Mol.Cell, 83, 2023
7UIG
DownloadVisualize
BU of 7uig by Molmil
Mediator-PIC Early (Mediator A)
Descriptor: DNA-directed RNA polymerase II subunit RPB1, Mediator of RNA polymerase II transcription subunit 1, Mediator of RNA polymerase II transcription subunit 10, ...
Authors:Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K.
Deposit date:2022-03-29
Release date:2023-02-15
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structural basis of a transcription pre-initiation complex on a divergent promoter.
Mol.Cell, 83, 2023
7UI9
DownloadVisualize
BU of 7ui9 by Molmil
Core Mediator-PICearly (Copy A)
Descriptor: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
Authors:Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K.
Deposit date:2022-03-28
Release date:2023-02-15
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis of a transcription pre-initiation complex on a divergent promoter.
Mol.Cell, 83, 2023

236060

PDB entries from 2025-05-14

PDB statisticsPDBj update infoContact PDBjnumon