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PDB: 2523 results

5JCE
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Crystal structure of OsCEBiP complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitin elicitor-binding protein
Authors:Chai, J.J, Liu, S.M, Wang, J.Z.
Deposit date:2016-04-15
Release date:2016-06-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Molecular Mechanism for Fungal Cell Wall Recognition by Rice Chitin Receptor OsCEBiP
Structure, 24, 2016
1JSM
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STRUCTURE OF H5 AVIAN HAEMAGGLUTININ
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HAEMAGGLUTININ (HA1 CHAIN), ...
Authors:Ha, Y, Stevens, D.J, Skehel, J.J, Wiley, D.C.
Deposit date:2001-08-17
Release date:2001-09-26
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:H5 avian and H9 swine influenza virus haemagglutinin structures: possible origin of influenza subtypes.
EMBO J., 21, 2002
5JFT
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Zebra Fish Caspase-3
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ACE-ASP-GLU-VAL-ASK, ...
Authors:Tucker, M.B, MacKenzie, S.H, Maciag, J.J, Dirscherl, H, Swartz, P.D, Yoder, J.A, Hamilton, P.T, Clark, A.C.
Deposit date:2016-04-19
Release date:2016-10-26
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Phage display and structural studies reveal plasticity in substrate specificity of caspase-3a from zebrafish.
Protein Sci., 25, 2016
5JJ8
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Crystal Structure of the Beta Carbonic Anhydrase psCA3 isolated from Pseudomonas aeruginosa - alternate crystal packing form
Descriptor: Carbonic anhydrase, ZINC ION
Authors:Pinard, M.A, Kurian, J.J, Aggarwal, M, Agbandje-McKenna, M, McKenna, R.
Deposit date:2016-04-22
Release date:2016-07-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.585 Å)
Cite:Cryoannealing-induced space-group transition of crystals of the carbonic anhydrase psCA3.
Acta Crystallogr.,Sect.F, 72, 2016
1J7P
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BU of 1j7p by Molmil
Solution structure of Calcium calmodulin C-terminal domain
Descriptor: CALCIUM ION, Calmodulin
Authors:Chou, J.J, Klee, C.B, Bax, A.
Deposit date:2001-05-17
Release date:2001-11-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of Ca(2+)-calmodulin reveals flexible hand-like properties of its domains.
Nat.Struct.Biol., 8, 2001
1TGG
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BU of 1tgg by Molmil
RH3 DESIGNED RIGHT-HANDED COILED COIL TRIMER
Descriptor: CHLORIDE ION, NICKEL (II) ION, right-handed coiled coil trimer
Authors:Plecs, J.J, Harbury, P.B, Kim, P.S, Alber, T.
Deposit date:2004-05-28
Release date:2004-10-12
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural test of the parameterized-backbone method for protein design
J.Mol.Biol., 342, 2004
3ZSX
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Small molecule inhibitors of the LEDGF site of HIV type 1 integrase identified by fragment screening and structure based drug design
Descriptor: 1,2-ETHANEDIOL, 5-({[2-(benzylcarbamoyl)benzyl](prop-2-en-1-yl)amino}methyl)-1,3-benzodioxole-4-carboxylate, ACETATE ION, ...
Authors:Peat, T.S, Newman, J, Rhodes, D.I, Vandergraaff, N, Le, G, Jones, E.D, Smith, J.A, Coates, J.A.V, Thienthong, N, Dolezal, O, Ryan, J.H, Savage, G.P, Francis, C.L, Deadman, J.J.
Deposit date:2011-07-01
Release date:2012-07-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Small Molecule Inhibitors of the Ledgf Site of Human Immunodeficiency Virus Integrase Identified by Fragment Screening and Structure Based Design.
Plos One, 7, 2012
1TJ2
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Crystal structure of E. coli PutA proline dehydrogenase domain (residues 86-669) complexed with acetate
Descriptor: ACETATE ION, Bifunctional putA protein, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Tanner, J.J, Zhang, M, White, T.A, Schuermann, J.P, Baban, B.A, Becker, D.F.
Deposit date:2004-06-03
Release date:2004-10-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structures of the Escherichia coli PutA proline dehydrogenase domain in complex with competitive inhibitors
Biochemistry, 43, 2004
1JSD
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CRYSTAL STRUCTURE OF SWINE H9 HAEMAGGLUTININ
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HAEMAGGLUTININ (HA1 CHAIN), ...
Authors:Ha, Y, Steven, D.J, Skehel, J.J, Wiley, D.C.
Deposit date:2001-08-17
Release date:2001-09-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:H5 avian and H9 swine influenza virus haemagglutinin structures: possible origin of influenza subtypes.
EMBO J., 21, 2002
1JY1
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CRYSTAL STRUCTURE OF HUMAN TYROSYL-DNA PHOSPHODIESTERASE (TDP1)
Descriptor: TYROSYL-DNA PHOSPHODIESTERASE
Authors:Davies, D.R, Interthal, H, Champoux, J.J, Hol, W.G.J.
Deposit date:2001-09-10
Release date:2002-02-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:The crystal structure of human tyrosyl-DNA phosphodiesterase, Tdp1.
Structure, 10, 2002
2RE8
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BU of 2re8 by Molmil
Glutaminyl-tRNA synthetase mutant C229R with bound analog 5'-O-[N-(L-GLUTAMYL)-SULFAMOYL]ADENOSINE
Descriptor: Glutamine tRNA, Glutaminyl-tRNA synthetase, O5'-(L-GLUTAMYL-SULFAMOYL)-ADENOSINE, ...
Authors:Bullock, T.L, Perona, J.J.
Deposit date:2007-09-25
Release date:2008-01-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A rationally engineered misacylating aminoacyl-tRNA synthetase.
Proc.Natl.Acad.Sci.Usa, 105, 2008
1BRC
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BU of 1brc by Molmil
RELOCATING A NEGATIVE CHARGE IN THE BINDING POCKET OF TRYPSIN
Descriptor: AMYLOID BETA-PROTEIN PRECURSOR INHIBITOR DOMAIN (APPI), TRYPSIN
Authors:Perona, J.J, Fletterick, R.J.
Deposit date:1992-12-17
Release date:1994-05-31
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Relocating a negative charge in the binding pocket of trypsin.
J.Mol.Biol., 230, 1993
1BSU
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STRUCTURAL AND ENERGETIC ORIGINS OF INDIRECT READOUT IN SITE-SPECIFIC DNA CLEAVAGE BY A RESTRICTION ENDONUCLEASE
Descriptor: CALCIUM ION, DNA (5'-D(*AP*AP*AP*GP*AP*(5CM)P*IP*TP*CP*TP*T)-3'), DNA (5'-D(P*AP*AP*GP*AP*(5CM)P*IP*TP*CP*TP*T)-3'), ...
Authors:Perona, J.J, Martin, A.M.
Deposit date:1998-08-30
Release date:1998-09-09
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and energetic origins of indirect readout in site-specific DNA cleavage by a restriction endonuclease.
Nat.Struct.Biol., 6, 1999
1JNI
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BU of 1jni by Molmil
Structure of the NapB subunit of the periplasmic nitrate reductase from Haemophilus influenzae.
Descriptor: DIHEME CYTOCHROME C NAPB, HEME C
Authors:Brige, A, Leys, D, Meyer, T.E, Cusanovich, M.A, Van Beeumen, J.J.
Deposit date:2001-07-24
Release date:2002-05-17
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:The 1.25 A resolution structure of the diheme NapB subunit of soluble nitrate reductase reveals a novel cytochrome c fold with a stacked heme arrangement.
Biochemistry, 41, 2002
1TJ1
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BU of 1tj1 by Molmil
Crystal structure of E. coli PutA proline dehydrogenase domain (residues 86-669) complexed with L-lactate
Descriptor: (2S)-2-HYDROXYPROPANOIC ACID, Bifunctional putA protein, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Tanner, J.J, Zhang, M, White, T.A, Schuermann, J.P, Baban, B.A, Becker, D.F.
Deposit date:2004-06-03
Release date:2004-10-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of the Escherichia coli PutA proline dehydrogenase domain in complex with competitive inhibitors
Biochemistry, 43, 2004
1JSN
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BU of 1jsn by Molmil
STRUCTURE OF AVIAN H5 HAEMAGGLUTININ COMPLEXED WITH LSTA RECEPTRO ANALOG
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HAEMAGGLUTININ (HA1 CHAIN), ...
Authors:Ha, Y, Stevens, D.J, Skehel, J.J, Wiley, D.C.
Deposit date:2001-08-17
Release date:2001-09-26
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray structures of H5 avian and H9 swine influenza virus hemagglutinins bound to avian and human receptor analogs.
Proc.Natl.Acad.Sci.USA, 98, 2001
1JWT
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BU of 1jwt by Molmil
CRYSTAL STRUCTURE OF THROMBIN IN COMPLEX WITH A NOVEL BICYCLIC LACTAM INHIBITOR
Descriptor: 4-OXO-2-PHENYLMETHANESULFONYL-OCTAHYDRO-PYRROLO[1,2-A]PYRAZINE-6-CARBOXYLIC ACID [1-(N-HYDROXYCARBAMIMIDOYL)-PIPERIDIN-4-YLMETHYL]-AMIDE, Prothrombin
Authors:Levesque, S, St-Denis, Y, Bachand, B, Preville, P, Leblond, L, Winocour, P.D, Edmunds, J.J, Rubin, J.R, Siddiqui, M.A.
Deposit date:2001-09-05
Release date:2002-02-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Novel bicyclic lactam inhibitors of thrombin: potency and selectivity optimization through P1 residues.
Bioorg.Med.Chem.Lett., 11, 2001
4B8E
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BU of 4b8e by Molmil
PRY-SPRY domain of Trim25
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, E3 UBIQUITIN/ISG15 LIGASE TRIM25
Authors:Kershaw, N.J, D'Cruz, A.A, Nicola, N.A, Nicholson, S.E, Babon, J.J.
Deposit date:2012-08-27
Release date:2013-09-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.779 Å)
Cite:Crystal Structure of the Trim25 B30.2 (Pryspry) Domain: A Key Component of Antiviral Signaling.
Biochem.J., 456, 2013
1ICL
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BU of 1icl by Molmil
SOLUTION STRUCTURE OF DESIGNED BETA-SHEET MINI-PROTEIN TH1OX
Descriptor: TH1OX
Authors:Ottesen, J.J, Imperiali, B.
Deposit date:2001-04-02
Release date:2001-04-11
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Design of a discretely folded mini-protein motif with predominantly beta-structure.
Nat.Struct.Biol., 8, 2001
1JA0
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CYPOR-W677X
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Hubbard, P.A, Shen, A.L, Paschke, R, Kasper, C.B, Kim, J.J.
Deposit date:2001-05-29
Release date:2001-08-22
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:NADPH-cytochrome P450 oxidoreductase. Structural basis for hydride and electron transfer.
J.Biol.Chem., 276, 2001
1M10
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Crystal structure of the complex of Glycoprotein Ib alpha and the von Willebrand Factor A1 Domain
Descriptor: Glycoprotein Ib alpha, von Willebrand Factor
Authors:Huizinga, E.G, Tsuji, S, Romijn, R.A.P, Schiphorst, M.E, de Groot, P.G, Sixma, J.J, Gros, P.
Deposit date:2002-06-16
Release date:2002-08-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of glycoprotein Ibalpha and its complex with von Willebrand factor A1 domain.
Science, 297, 2002
1M1R
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Reduced p222 crystal structure of the tetraheme cytochrome c of Shewanella oneidensis MR1
Descriptor: HEME C, SMALL tetraheme cytochrome c, SULFATE ION
Authors:Leys, D, Meyer, T.E, Tsapin, A.I, Nealson, K.H, Cusanovich, M.A, Van Beeumen, J.J.
Deposit date:2002-06-20
Release date:2002-08-14
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Crystal structures at atomic resolution reveal the novel concept of 'electron-harvesting' as a role for the small tetraheme cytochrome c
J.Biol.Chem., 277, 2002
1JRO
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Crystal Structure of Xanthine Dehydrogenase from Rhodobacter capsulatus
Descriptor: CALCIUM ION, DIOXOTHIOMOLYBDENUM(VI) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Truglio, J.J, Theis, K, Leimkuhler, S, Rappa, R, Rajagopalan, K.V, Kisker, C.
Deposit date:2001-08-14
Release date:2002-01-11
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of the active and alloxanthine-inhibited forms of xanthine dehydrogenase from Rhodobacter capsulatus
Structure, 10, 2002
1JSO
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BU of 1jso by Molmil
STRUCTURE OF AVIAN H5 HAEMAGGLUTININ BOUND TO LSTC RECEPTOR ANALOG
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HAEMAGGLUTININ (HA1 CHAIN), ...
Authors:Ha, Y, Stevens, D.J, Skehel, J.J, Wiley, D.C.
Deposit date:2001-08-17
Release date:2001-09-26
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray structures of H5 avian and H9 swine influenza virus hemagglutinins bound to avian and human receptor analogs.
Proc.Natl.Acad.Sci.USA, 98, 2001
1JR6
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BU of 1jr6 by Molmil
Solution Structure of an Engineered Arginine-rich Subdomain 2 of the Hepatitis C Virus NS3 RNA Helicase
Descriptor: Helicase NS3
Authors:Liu, D, Wyss, D.F, Wang, Y.S, Gesell, J.J.
Deposit date:2001-08-10
Release date:2002-08-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure and backbone dynamics of an engineered arginine-rich subdomain 2 of the hepatitis C virus NS3 RNA helicase.
J.Mol.Biol., 314, 2001

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