Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 6628 件
1G00
DownloadVisualize
BU of 1g00 by Molmil
ALTERNATION OF DNA AND SOLVENT LAYERS IN THE A FORM OF D(GGCGCC) OBTAINED BY ETHANOL CRYSTALLIZATION
分子名称: 5'-D(*GP*GP*CP*GP*CP*C)-3'
著者Urpi, L, Navaza, J, Subirana, J.A.
登録日2000-10-05
公開日2001-02-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Alternation of DNA and solvent layers in the A form of d(GGCGCC) obtained by ethanol crystallization.
J.Biomol.Struct.Dyn., 18, 2000
3VKE
DownloadVisualize
BU of 3vke by Molmil
Contribution of the first K-homology domain of poly(C)-binding protein 1 to its affinity and specificity for C-rich oligonucleotides
分子名称: DNA (5'-D(P*AP*CP*CP*CP*CP*A)-3'), Poly(rC)-binding protein 1
著者Traore, D.A.K, Wilce, M.C.J, Wilce, J.A.
登録日2011-11-15
公開日2012-02-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Contribution of the first K-homology domain of poly(C)-binding protein 1 to its affinity and specificity for C-rich oligonucleotides
Nucleic Acids Res., 40, 2012
1GM8
DownloadVisualize
BU of 1gm8 by Molmil
Crystal structures of penicillin acylase enzyme-substrate complexes: Structural insights into the catalytic mechanism
分子名称: CALCIUM ION, N-[(2S,4S,6R)-2-(DIHYDROXYMETHYL)-4-HYDROXY-3,3-DIMETHYL-7-OXO-4LAMBDA~4~-THIA-1-AZABICYCLO[3.2.0]HEPT-6-YL]-2-PHENYLAC ETAMIDE, PENICILLIN G ACYLASE ALPHA SUBUNIT, ...
著者McVey, C.E, Walsh, M.A, Dodson, G.G, Wilson, K.S, Brannigan, J.A.
登録日2001-09-11
公開日2001-11-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structures of Penicillin Acylase Enzyme- Substrate Complexes: Structural Insights Into the Catalytic Mechanism
J.Mol.Biol., 313, 2001
6C3K
DownloadVisualize
BU of 6c3k by Molmil
Apo crystal structure of S. aureus penicillin binding protein 4 (PBP4) mutant (E183A, F241R)
分子名称: CHLORIDE ION, Penicillin-binding protein 4, SODIUM ION, ...
著者Alexander, J.A.N, Strynadka, N.C.J.
登録日2018-01-10
公開日2018-11-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and kinetic analyses of penicillin-binding protein 4 (PBP4)-mediated antibiotic resistance inStaphylococcus aureus.
J. Biol. Chem., 293, 2018
3V5C
DownloadVisualize
BU of 3v5c by Molmil
Crystal structure of the mutant E234A of Galacturonate Dehydratase from GEOBACILLUS SP. complexed with Mg
分子名称: DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, Mandelate racemase/muconate lactonizing protein
著者Fedorov, A.A, Fedorov, E.V, Groninger-Poe, F, Gerlt, J.A, Almo, S.C.
登録日2011-12-16
公開日2012-12-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Crystal structure of the mutant E234A of Galacturonate Dehydratase from GEOBACILLUS SP. complexed with Mg
To be Published
4E4J
DownloadVisualize
BU of 4e4j by Molmil
Crystal structure of arginine deiminase from Mycoplasma penetrans
分子名称: Arginine deiminase, CHLORIDE ION
著者Benach, J, Gallego, P, Planell, R, Querol, E, Perez Pons, J.A, Reverter, D.
登録日2012-03-13
公開日2012-10-31
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Characterization of the Enzymes Composing the Arginine Deiminase Pathway in Mycoplasma penetrans.
Plos One, 7, 2012
3UXW
DownloadVisualize
BU of 3uxw by Molmil
Crystal Structures of an A-T-hook/DNA complex
分子名称: A-T hook peptide, dodecamer DNA
著者Fonfria-Subiros, E, Acosta-Reyes, F.J, Saperas, N, Pous, J, Subirana, J.A, Campos, J.L.
登録日2011-12-05
公開日2012-05-23
最終更新日2013-03-27
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Crystal structure of a complex of DNA with one AT-hook of HMGA1.
Plos One, 7, 2012
1G3V
DownloadVisualize
BU of 1g3v by Molmil
CRYSTAL STRUCTURE OF NICKEL-D[CGTGTACACG]2
分子名称: 5'-D(*CP*GP*TP*GP*TP*AP*CP*AP*CP*G)-3', NICKEL (II) ION
著者Subirana, J.A, Abrescia, N.G.A.
登録日2000-10-25
公開日2002-01-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Nickel-guanine interactions in DNA: crystal structure of nickel-d[CGTGTACACG]2.
J.Biol.Inorg.Chem., 7, 2002
3UOT
DownloadVisualize
BU of 3uot by Molmil
Crystal Structure of MDC1 FHA Domain in Complex with a Phosphorylated Peptide from the MDC1 N-terminus
分子名称: Mediator of DNA damage checkpoint protein 1
著者Clapperton, J.A, Lloyd, J, Haire, L.F, Li, J, Smerdon, S.J.
登録日2011-11-17
公開日2011-12-28
最終更新日2012-07-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The molecular basis of ATM-dependent dimerization of the Mdc1 DNA damage checkpoint mediator.
Nucleic Acids Res., 40, 2012
1G5S
DownloadVisualize
BU of 1g5s by Molmil
CRYSTAL STRUCTURE OF HUMAN CYCLIN DEPENDENT KINASE 2 (CDK2) IN COMPLEX WITH THE INHIBITOR H717
分子名称: 2-[TRANS-(4-AMINOCYCLOHEXYL)AMINO]-6-(BENZYL-AMINO)-9-CYCLOPENTYLPURINE, CELL DIVISION PROTEIN KINASE 2
著者Dreyer, M.K, Borcherding, D.R, Dumont, J.A, Peet, N.P, Tsay, J.T, Wright, P.S, Bitonti, A.J, Shen, J, Kim, S.-H.
登録日2000-11-02
公開日2001-11-02
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Crystal structure of human cyclin-dependent kinase 2 in complex with the adenine-derived inhibitor H717.
J.Med.Chem., 44, 2001
3VC6
DownloadVisualize
BU of 3vc6 by Molmil
Crystal structure of enolase Tbis_1083(TARGET EFI-502310) FROM Thermobispora bispora DSM 43833 complexed with magnesium and formate
分子名称: FORMIC ACID, MAGNESIUM ION, Mandelate racemase/muconate lactonizing protein
著者Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2012-01-03
公開日2012-02-01
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Crystal structure of enolase Tbis_1083 FROM Thermobispora bispora DSM 43833
To be Published
1GKF
DownloadVisualize
BU of 1gkf by Molmil
Crystal structures of penicillin acylase enzyme-substrate complexes: Structural insights into the catalytic mechanism
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, PENICILLIN G ACYLASE ALPHA SUBUNIT, ...
著者McVey, C.E, Walsh, M.A, Dodson, G.G, Wilson, K.S, Brannigan, J.A.
登録日2001-08-13
公開日2002-01-04
最終更新日2019-07-24
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Crystal Structures of Penicillin Acylase Enzyme- Substrate Complexes: Structural Insights Into the Catalytic Mechanism
J.Mol.Biol., 313, 2001
3VC5
DownloadVisualize
BU of 3vc5 by Molmil
Crystal structure of enolase Tbis_1083(TARGET EFI-502310) FROM Thermobispora bispora DSM 43833 complexed with phosphate
分子名称: Mandelate racemase/muconate lactonizing protein, PHOSPHATE ION
著者Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2012-01-03
公開日2012-02-01
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of enolase Tbis_1083 FROM Thermobispora bispora DSM 43833
To be Published
3H79
DownloadVisualize
BU of 3h79 by Molmil
Crystal structure of Trypanosoma cruzi thioredoxin-like hypothetical protein Q4DV70
分子名称: THIOCYANATE ION, Thioredoxin-like protein
著者Santos, C.R, Fessel, M.R, Vieira, L.C, Krieger, M.A, Goldenberg, S, Guimaraes, B.G, Zanchin, N.I.T, Barbosa, J.A.R.G.
登録日2009-04-24
公開日2009-05-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of Trypanosoma cruzi thioredoxin-like hypothetical protein Q4DV70
TO BE PUBLISHED
3VDG
DownloadVisualize
BU of 3vdg by Molmil
Crystal structure of enolase MSMEG_6132 (TARGET EFI-502282) from Mycobacterium smegmatis str. MC2 155 complexed with formate and acetate
分子名称: ACETATE ION, CHLORIDE ION, FORMIC ACID, ...
著者Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2012-01-05
公開日2012-01-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of enolase MSMEG_6132 FROM Mycobacterium smegmatis
To be Published
1GK9
DownloadVisualize
BU of 1gk9 by Molmil
Crystal structures of penicillin acylase enzyme-substrate complexes: Structural insights into the catalytic mechanism
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, PENICILLIN G ACYLASE ALPHA SUBUNIT, ...
著者McVey, C.E, Walsh, M.A, Dodson, G.G, Wilson, K.S, Brannigan, J.A.
登録日2001-08-10
公開日2002-01-04
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal Structures of Penicillin Acylase Enzyme-Substrate Complexes: Structural Insights Into the Catalytic Mechanism
J.Mol.Biol., 313, 2001
3VFH
DownloadVisualize
BU of 3vfh by Molmil
BlaC E166A CDC-1 Acyl-Intermediate
分子名称: (2R)-5-methylidene-2-{(1R)-2-oxo-1-[(phenylacetyl)amino]ethyl}-5,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, Beta-lactamase, PHOSPHATE ION
著者Mire, J.A, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC)
登録日2012-01-09
公開日2012-09-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献BlaC-Specific Fluorogenic Probes for Rapid Tuberculosis Detection
To be Published
1FZJ
DownloadVisualize
BU of 1fzj by Molmil
MHC CLASS I NATURAL MUTANT H-2KBM1 HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND VESICULAR STOMATITIS VIRUS NUCLEOPROTEIN
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Rudolph, M.G, Speir, J.A, Brunmark, A, Mattsson, N, Jackson, M.R, Peterson, P.A, Teyton, L, Wilson, I.A.
登録日2000-10-03
公開日2001-03-28
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The crystal structures of K(bm1) and K(bm8) reveal that subtle changes in the peptide environment impact thermostability and alloreactivity.
Immunity, 14, 2001
1IN7
DownloadVisualize
BU of 1in7 by Molmil
THERMOTOGA MARITIMA RUVB R170A
分子名称: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, HOLLIDAY JUNCTION DNA HELICASE RUVB
著者Putnam, C.D, Clancy, S.B, Tsuruta, H, Wetmur, J.G, Tainer, J.A.
登録日2001-05-12
公開日2001-08-08
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and mechanism of the RuvB Holliday junction branch migration motor.
J.Mol.Biol., 311, 2001
1IN6
DownloadVisualize
BU of 1in6 by Molmil
THERMOTOGA MARITIMA RUVB K64R MUTANT
分子名称: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, COBALT (II) ION, ...
著者Putnam, C.D, Clancy, S.B, Tsuruta, H, Wetmur, J.G, Tainer, J.A.
登録日2001-05-12
公開日2001-08-08
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure and mechanism of the RuvB Holliday junction branch migration motor.
J.Mol.Biol., 311, 2001
3TOU
DownloadVisualize
BU of 3tou by Molmil
Crystal structure of GLUTATHIONE TRANSFERASE (TARGET EFI-501058) from Ralstonia solanacearum GMI1000 with GSH bound
分子名称: ACETATE ION, GLUTATHIONE, Glutathione s-transferase protein
著者Patskovsky, Y, Toro, R, Bhosle, R, Zencheck, W.D, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Imker, H.J, Armstrong, R.N, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2011-09-06
公開日2011-09-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of GLUTATHIONE S-TRANSFERASE from Ralstonia solanacearum
To be Published
1J8A
DownloadVisualize
BU of 1j8a by Molmil
CRYSTAL STRUCTURE OF BENZAMIDINE INHIBITED BOVINE PANCREATIC TRYPSIN AT 105K TO 1.21A RESOLUTION FROM LABORATORY SOURCE WITH HIGH NUMBER OF WATERS MODELLED
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BENZAMIDINE, CALCIUM ION, ...
著者Cuesta-Seijo, J.A, Garcia-Granda, S.
登録日2001-05-21
公開日2001-09-12
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Trypsin as a model for high resolution X-ray diffraction in proteins.
BOL.R.SOC.HIST.NAT.SEC.GEOL., 97, 2002
3TVU
DownloadVisualize
BU of 3tvu by Molmil
Crystal Structure of the humanized carboxyltransferase domain of yeast Acetyl-coA caroxylase in complex with compound 3
分子名称: 4-({4-[(2-methylquinolin-6-yl)methyl]piperidin-1-yl}carbonyl)-2-phenylquinoline, Acetyl-CoA carboxylase
著者Rajamohan, F, Marr, E, Reyes, A, Landro, J.A, Anderson, M.D, Corbett, J.W, Dirico, K.J, Harwood, J.H, Tu, M, Vajdos, F.F.
登録日2011-09-20
公開日2011-10-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure-guided Inhibitor Design for Human Acetyl-coenzyme A Carboxylase by Interspecies Active Site Conversion.
J.Biol.Chem., 286, 2011
1IN5
DownloadVisualize
BU of 1in5 by Molmil
THERMOGOTA MARITIMA RUVB A156S MUTANT
分子名称: ADENOSINE-5'-DIPHOSPHATE, HOLLIDAY JUNCTION DNA HELICASE RUVB
著者Putnam, C.D, Clancy, S.B, Tsuruta, H, Gonzalez, S, Wetmur, J.G, Tainer, J.A.
登録日2001-05-12
公開日2001-08-08
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and mechanism of the RuvB Holliday junction branch migration motor.
J.Mol.Biol., 311, 2001
3TZ3
DownloadVisualize
BU of 3tz3 by Molmil
Crystal Structure of the humanized carboxyltransferase domain of yeast Acetyl-coA caroxylase in complex with compound 2
分子名称: 6-{[1-(anthracen-9-ylcarbonyl)piperidin-4-yl]methyl}-2-methylquinoline, Acetyl-CoA carboxylase
著者Rajamohan, F, Marr, E, Reyes, A, Landro, J.A, Anderson, M.D, Corbett, J.W, Dirico, K.J, Harwood, J.H, Tu, M, Vajdos, F.F.
登録日2011-09-26
公開日2011-10-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure-guided Inhibitor Design for Human Acetyl-coenzyme A Carboxylase by Interspecies Active Site Conversion.
J.Biol.Chem., 286, 2011

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon