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PDB: 6628 件
7M4H
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BU of 7m4h by Molmil
DNA Polymerase Lambda, dCTP:At Mn2+ Reaction State Ternary Complex, 225 min
分子名称: 1,2-ETHANEDIOL, 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*GP*TP*AP*CP*C)-3'), ...
著者Jamsen, J.A, Wilson, S.H.
登録日2021-03-21
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.923 Å)
主引用文献Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M47
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BU of 7m47 by Molmil
DNA Polymerase Lambda, TTP:At Mg2+ Product State Ternary Complex, 60 min
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*CP*AP*GP*TP*AP*CP*T)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
著者Jamsen, J.A, Wilson, S.H.
登録日2021-03-21
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.648 Å)
主引用文献Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M43
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BU of 7m43 by Molmil
DNA Polymerase Lambda, TTP:At Ca2+ Ground State Ternary Complex
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, DNA (5'-D(*CP*AP*GP*TP*AP*C)-3'), ...
著者Jamsen, J.A, Wilson, S.H.
登録日2021-03-21
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.978 Å)
主引用文献Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M4F
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BU of 7m4f by Molmil
DNA Polymerase Lambda, dCTP:At Mg2+ Product State Ternary Complex, 300 min
分子名称: CHLORIDE ION, DNA (5'-D(*CP*AP*GP*TP*AP*CP*C)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
著者Jamsen, J.A, Wilson, S.H.
登録日2021-03-21
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.947 Å)
主引用文献Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M4J
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BU of 7m4j by Molmil
DNA Polymerase Lambda, dCTP:At Mn2+ Product State Ternary Complex, 960 min
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*CP*AP*GP*TP*AP*CP*C)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
著者Jamsen, J.A, Wilson, S.H.
登録日2021-03-21
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.377 Å)
主引用文献Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M4A
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BU of 7m4a by Molmil
DNA Polymerase Lambda, TTP:At Mn2+ Product State Ternary Complex, 20 min
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*CP*AP*GP*TP*AP*CP*T)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
著者Jamsen, J.A, Wilson, S.H.
登録日2021-03-21
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.868 Å)
主引用文献Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M4E
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BU of 7m4e by Molmil
DNA Polymerase Lambda, dCTP:At Mg2+ Reaction State Ternary Complex, 120 min
分子名称: 1,2-ETHANEDIOL, 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*GP*TP*AP*CP*C)-3'), ...
著者Jamsen, J.A, Wilson, S.H.
登録日2021-03-21
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M45
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BU of 7m45 by Molmil
DNA Polymerase Lambda, TTP:At Mg2+ Reaction State Ternary Complex, 120 sec
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*CP*AP*GP*TP*AP*CP*T)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
著者Jamsen, J.A, Wilson, S.H.
登録日2021-03-21
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.889 Å)
主引用文献Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M4C
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BU of 7m4c by Molmil
DNA Polymerase Lambda, TTP:At Mn2+ Product State Ternary Complex, 960 min
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*CP*AP*GP*TP*AP*CP*T)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
著者Jamsen, J.A, Wilson, S.H.
登録日2021-03-21
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M4K
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BU of 7m4k by Molmil
DNA Polymerase Lambda, TTPaS:At Ca2+ Ground State Ternary Complex
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, DNA (5'-D(*CP*AP*GP*TP*AP*C)-3'), ...
著者Jamsen, J.A, Wilson, S.H.
登録日2021-03-21
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.719 Å)
主引用文献Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M44
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BU of 7m44 by Molmil
DNA Polymerase Lambda, TTP:At Mg2+ Reaction State Ternary Complex, 90 sec
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*CP*AP*GP*TP*AP*CP*T)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
著者Jamsen, J.A, Wilson, S.H.
登録日2021-03-21
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M46
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BU of 7m46 by Molmil
DNA Polymerase Lambda, TTP:At Mg2+ Product State Ternary Complex, 5 min
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*CP*AP*GP*TP*AP*CP*T)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
著者Jamsen, J.A, Wilson, S.H.
登録日2021-03-21
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M4G
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BU of 7m4g by Molmil
DNA Polymerase Lambda, dCTP:At Mg2+ Product State Ternary Complex, 960 min
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*CP*AP*GP*TP*AP*CP*C)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
著者Jamsen, J.A, Wilson, S.H.
登録日2021-03-21
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M4D
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BU of 7m4d by Molmil
DNA Polymerase Lambda, dCTP:At Ca2+ Ground State Ternary Complex
分子名称: 1,2-ETHANEDIOL, 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
著者Jamsen, J.A, Wilson, S.H.
登録日2021-03-21
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.817 Å)
主引用文献Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M4I
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BU of 7m4i by Molmil
DNA Polymerase Lambda, dCTP:At Mn2+ Product State Ternary Complex, 420 min
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*CP*AP*GP*TP*AP*CP*C)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
著者Jamsen, J.A, Wilson, S.H.
登録日2021-03-21
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.005 Å)
主引用文献Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
2AV8
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BU of 2av8 by Molmil
Y122F MUTANT OF RIBONUCLEOTIDE REDUCTASE FROM ESCHERICHIA COLI
分子名称: FE (II) ION, MU-OXO-DIIRON, RIBONUCLEOTIDE REDUCTASE R2
著者Han, S, Arvai, A, Tainer, J.A.
登録日1997-09-30
公開日1998-10-28
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Characterization of Y122F R2 of Escherichia coli ribonucleotide reductase by time-resolved physical biochemical methods and X-ray crystallography.
Biochemistry, 37, 1998
7M48
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BU of 7m48 by Molmil
DNA Polymerase Lambda, TTP:At Mg2+ Product State Ternary Complex, 960 min
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*CP*AP*GP*TP*AP*CP*T)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
著者Jamsen, J.A, Wilson, S.H.
登録日2021-03-21
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M4L
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BU of 7m4l by Molmil
DNA Polymerase Lambda, TTPaS:At Mn2+ Product State Ternary Complex, 60 min
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*CP*AP*GP*TP*AP*CP*(YQS))-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
著者Jamsen, J.A, Wilson, S.H.
登録日2021-03-21
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7MDC
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BU of 7mdc by Molmil
Full-length wildtype ClbP inhibited by hexanoyl-D-asparagine boronic acid
分子名称: (2S)-2,3-dihydroxypropyl (9Z)-hexadec-9-enoate, Beta-lactamase, CHLORIDE ION, ...
著者Velilla, J.A, Volpe, M.R, Gaudet, R.
登録日2021-04-03
公開日2022-09-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A small molecule inhibitor prevents gut bacterial genotoxin production.
Nat.Chem.Biol., 19, 2023
7MDE
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BU of 7mde by Molmil
Full-length S95A ClbP
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Beta-lactamase, CHLORIDE ION, ...
著者Velilla, J.A, Volpe, M.R, Gaudet, R.
登録日2021-04-04
公開日2022-09-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of colibactin activation by the ClbP peptidase.
Nat.Chem.Biol., 19, 2023
5AMY
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BU of 5amy by Molmil
Crystal Structure of Hen egg white lysozyme processed with the CrystalDirect automated mounting and cryo-cooling technology
分子名称: LYSOZYME C
著者Zander, U, Hoffmann, G, Cornaciu, I, Cipriani, F, Marquez, J.A.
登録日2015-09-02
公開日2016-10-05
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Automated Harvesting and Processing of Protein Crystals Through Laser Photoablation.
To be Published
7MDF
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BU of 7mdf by Molmil
Full-length S95A ClbP bound to N-acyl-D-asparagine analog
分子名称: (2S)-2,3-dihydroxypropyl (9Z)-hexadec-9-enoate, Beta-lactamase, CHLORIDE ION, ...
著者Velilla, J.A, Volpe, M.R, Gaudet, R.
登録日2021-04-04
公開日2022-09-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis of colibactin activation by the ClbP peptidase.
Nat.Chem.Biol., 19, 2023
5AXG
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BU of 5axg by Molmil
Crystal structure of thermophilic dextranase from Thermoanaerobacter pseudethanolicus
分子名称: 1,2-ETHANEDIOL, 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, Dextranase, ...
著者Suzuki, N, Kishine, N, Fujimoto, Z, Sakurai, M, Momma, M, Ko, J.A, Nam, S.H, Kimura, A, Kim, Y.M.
登録日2015-07-29
公開日2015-11-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of thermophilic dextranase from Thermoanaerobacter pseudethanolicus
J.Biochem., 159, 2016
5AYB
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BU of 5ayb by Molmil
Crystal structure of GH1 Beta-Glucosidase TD2F2 N223G mutant
分子名称: 1,2-ETHANEDIOL, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, BETA-GLUCOSIDASE, ...
著者Jo, T, Manninen, J.A, Matsuzawa, T, Uchiyama, T, Yaoi, K, Arakawa, T, Fushinobu, S.
登録日2015-08-12
公開日2016-04-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure and identification of a key amino acid for glucose tolerance, substrate specificity, and transglycosylation activity of metagenomic beta-glucosidase Td2F2
Febs J., 283, 2016
4JYX
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BU of 4jyx by Molmil
Crystal structure of polyprenyl synthase PATL_3739 (TARGET EFI-509195) FROM PSEUDOALTEROMONAS ATLANTICA, COMPLEX WITH INORGANIC PHOSPHATE AND AN UNKNOWN LIGAND
分子名称: PHOSPHATE ION, Trans-hexaprenyltranstransferase, UNKNOWN LIGAND
著者Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Al Obaidi, N, Stead, M, Love, J, Poulter, C.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2013-04-01
公開日2013-04-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of Isoprenoid Synthase Patl_3739 from Pseudoalteromonas Atlantica
To be Published

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件を2024-07-24に公開中

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