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PDB: 42836 results

6V23
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BU of 6v23 by Molmil
Ligand-free L-aspraginase II from E. coli (EcAII)
Descriptor: L-asparaginase 2
Authors:Lubkowski, J, Wlodawer, A.
Deposit date:2019-11-22
Release date:2020-05-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Mechanism of Catalysis by l-Asparaginase.
Biochemistry, 59, 2020
6V2B
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BU of 6v2b by Molmil
Complex of double mutant (T89V,K162T) of E. coli L-asparaginase II with L-Asn
Descriptor: ASPARAGINE, CITRIC ACID, L-asparaginase 2
Authors:Lubkowski, J, Wlodawer, A.
Deposit date:2019-11-22
Release date:2020-05-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Mechanism of Catalysis by l-Asparaginase.
Biochemistry, 59, 2020
1S1X
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BU of 1s1x by Molmil
Crystal structure of V108I mutant HIV-1 reverse transcriptase in complex with nevirapine
Descriptor: 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE, Reverse transcriptase
Authors:Ren, J, Nichols, C.E, Chamberlain, P.P, Stammers, D.K.
Deposit date:2004-01-07
Release date:2004-06-29
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structures of HIV-1 reverse transcriptases mutated at codons 100, 106 and 108 and mechanisms of resistance to non-nucleoside inhibitors
J.Mol.Biol., 336, 2004
8QEA
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BU of 8qea by Molmil
Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution: 96 fs structure
Descriptor: Azo-Combretastatin A4 (cis), CALCIUM ION, Designed Ankyrin Repeat Protein (DARPIN) D1, ...
Authors:Weinert, T, Wranik, M, Seidel, H.-P, Church, J, Steinmetz, M.O, Schapiro, I, Standfuss, J.
Deposit date:2023-08-31
Release date:2024-09-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution
To Be Published
7R69
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BU of 7r69 by Molmil
Crystal structure of mutant R43D/C273S of L-Asparaginase I from Yersinia pestis
Descriptor: 1,2-ETHANEDIOL, L-asparaginase I
Authors:Strzelczyk, P, Wlodawer, A, Lubkowski, J.
Deposit date:2021-06-22
Release date:2022-07-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The dimeric form of bacterial l-asparaginase YpAI is fully active.
Febs J., 290, 2023
6VDN
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BU of 6vdn by Molmil
HCV NS3/4A protease A156T mutant
Descriptor: GLYCEROL, Non-structural protein 4A, Serine protease NS3, ...
Authors:Timm, J, Schiffer, C.A.
Deposit date:2019-12-27
Release date:2020-12-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:apo HCV protease A156T
To Be Published
6V28
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BU of 6v28 by Molmil
Complex of double mutant (T89V,K162T) of E. coli L-asparaginase II with L-Asp
Descriptor: GLYCEROL, IMIDAZOLE, L-asparaginase 2
Authors:Lubkowski, J, Wlodawer, A.
Deposit date:2019-11-22
Release date:2020-05-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Mechanism of Catalysis by l-Asparaginase.
Biochemistry, 59, 2020
6V48
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BU of 6v48 by Molmil
The crystal structure of hemagglutinin from A/mallard/Gurjev/263/1982 (H14N5)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, ...
Authors:Yang, H, Stevens, J.
Deposit date:2019-11-27
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.004 Å)
Cite:Molecular characterization and three-dimensional structures of avian H8, H11, H14, H15 and swine H4 influenza virus hemagglutinins
Heliyon, 6, 2020
7R0J
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BU of 7r0j by Molmil
Structure of the V2 receptor Cter-arrestin2-ScFv30 complex
Descriptor: Arrestin2, ScFv30, V2R Cter
Authors:Bous, J, Fouillen, A, Trapani, S, Granier, S, Mouillac, B, Bron, P.
Deposit date:2022-02-02
Release date:2022-09-14
Method:ELECTRON MICROSCOPY (4.23 Å)
Cite:Structure of the vasopressin hormone-V2 receptor-beta-arrestin1 ternary complex.
Sci Adv, 8, 2022
8QKF
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BU of 8qkf by Molmil
SmtB protein of Mycobacterium smegmatis
Descriptor: ArsR family transcriptional regulator
Authors:Potocki, S, Pyra, A, Nowak, E, Rola, A, Plaskowka, K, Trojanowski, D, Holowka, J, Pasikowski, P, Gumienna-Kontecka, E, Zakrzewska-Czerwinska, J.
Deposit date:2023-09-15
Release date:2024-09-25
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:SmtB protein of Mycobacterium smegmatis
To Be Published
7R0C
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BU of 7r0c by Molmil
Structure of the AVP-V2R-arrestin2-ScFv30 complex
Descriptor: AVP, Arrestin2, ScFv30, ...
Authors:Bous, J, Fouillen, A, Trapani, S, Granier, S, Mouillac, B, Bron, P.
Deposit date:2022-02-01
Release date:2022-09-14
Method:ELECTRON MICROSCOPY (4.73 Å)
Cite:Structure of the vasopressin hormone-V2 receptor-beta-arrestin1 ternary complex.
Sci Adv, 8, 2022
6V29
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BU of 6v29 by Molmil
Complex of double mutant (T89V,K162T) of E. coli L-asparaginase II with L-Asp
Descriptor: ASPARTIC ACID, GLYCEROL, L-asparaginase 2
Authors:Lubkowski, J, Wlodawer, A.
Deposit date:2019-11-22
Release date:2020-05-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanism of Catalysis by l-Asparaginase.
Biochemistry, 59, 2020
8QL6
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BU of 8ql6 by Molmil
Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution: 25 ps structure
Descriptor: Azo-Combretastatin A4 (trans), CALCIUM ION, Designed Ankyrin Repeat Protein (DARPIN) D1, ...
Authors:Weinert, T, Wranik, M, Seidel, H.-P, Church, J, Steinmetz, M.O, Schapiro, I, Standfuss, J.
Deposit date:2023-09-19
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution
To Be Published
6V9M
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BU of 6v9m by Molmil
Expanding the Chemical Landscape of SOS1 Activators Using Fragment Based Methods
Descriptor: 4-fluoro-2-methyl-N-propylbenzene-1-sulfonamide, FORMIC ACID, GLYCEROL, ...
Authors:Phan, J, Fesik, S.W.
Deposit date:2019-12-13
Release date:2020-08-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.648 Å)
Cite:Discovery of Sulfonamide-Derived Agonists of SOS1-Mediated Nucleotide Exchange on RAS Using Fragment-Based Methods.
J.Med.Chem., 63, 2020
8QMW
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BU of 8qmw by Molmil
Non-obligately L8S8-complex forming RubisCO derived from ancestral sequence reconstruction and rational engineering in L8S8 complex with substitutions R269W, E271R, L273N
Descriptor: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MAGNESIUM ION, ...
Authors:Zarzycki, J, Schulz, L, Erb, T.J, Hochberg, G.K.A.
Deposit date:2023-09-25
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Layered entrenchment maintains essentiality in protein-protein interactions
Embo J., 2024
8QTZ
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BU of 8qtz by Molmil
Cryo-EM reconstruction of VP5*/VP8* assembly from SA11 Rotavirus Tripsinized Triple Layered Particle
Descriptor: Outer capsid protein VP4
Authors:Asensio-Cob, D, Perez-Mata, C, Gomez-Blanco, J, Vargas, J, Rodriguez, J.M, Luque, D.
Deposit date:2023-10-13
Release date:2024-09-25
Method:ELECTRON MICROSCOPY (4.27 Å)
Cite:Structural basis of rotavirus spike proteolytic activation
To Be Published
8QMQ
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BU of 8qmq by Molmil
Succinic semialdehyde dehydrogenase from E. coli with bound NAD+
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Succinate semialdehyde dehydrogenase [NAD(P)+] Sad
Authors:He, H, Zarzycki, J, Erb, T.J.
Deposit date:2023-09-25
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Adaptive laboratory evolution recruits the promiscuity of succinate semialdehyde dehydrogenase to repair different metabolic deficiencies
Nat Commun, 2024
8QL8
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BU of 8ql8 by Molmil
Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution: 125 ps structure
Descriptor: Azo-Combretastatin A4 (trans), CALCIUM ION, Designed Ankyrin Repeat Protein (DARPIN) D1, ...
Authors:Weinert, T, Wranik, M, Seidel, H.-P, Church, J, Steinmetz, M.O, Schapiro, I, Standfuss, J.
Deposit date:2023-09-19
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution
To Be Published
8QL4
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BU of 8ql4 by Molmil
Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution: 349 fs structure
Descriptor: Azo-Combretastatin A4 (cis), CALCIUM ION, Designed Ankyrin Repeat Protein (DARPIN) D1, ...
Authors:Weinert, T, Wranik, M, Seidel, H.-P, Church, J, Steinmetz, M.O, Schapiro, I, Standfuss, J.
Deposit date:2023-09-19
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution
To Be Published
8QMR
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BU of 8qmr by Molmil
Succinic semialdehyde dehydrogenase from E. coli with bound NAD+ and succinic semialdehyde
Descriptor: 4-oxobutanoic acid, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Succinate semialdehyde dehydrogenase [NAD(P)+] Sad
Authors:He, H, Zarzycki, J, Erb, T.J.
Deposit date:2023-09-25
Release date:2024-10-02
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Adaptive laboratory evolution recruits the promiscuity of succinate semialdehyde dehydrogenase to repair different metabolic deficiencies
Nat Commun, 2024
6VDL
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BU of 6vdl by Molmil
HCV NS3/4A protease A156T mutant in complex with glecaprevir
Descriptor: (3aR,7S,10S,12R,21E,24aR)-7-tert-butyl-N-[(1R,2R)-2-(difluoromethyl)-1-{[(1-methylcyclopropyl)sulfonyl]carbamoyl}cyclop ropyl]-20,20-difluoro-5,8-dioxo-2,3,3a,5,6,7,8,11,12,20,23,24a-dodecahydro-1H,10H-9,12-methanocyclopenta[18,19][1,10,17, 3,6]trioxadiazacyclononadecino[11,12-b]quinoxaline-10-carboxamide, GLYCEROL, ...
Authors:Timm, J, Schiffer, C.A.
Deposit date:2019-12-27
Release date:2020-12-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:RAS at position 156 of HCV NS3/4A protease abolish inhibition by current HCV drugs
To Be Published
8QMS
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BU of 8qms by Molmil
Succinic semialdehyde dehydrogenase from E. coli with Q262R substitution and bound NAD+
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Succinate semialdehyde dehydrogenase [NAD(P)+] Sad
Authors:He, H, Zarzycki, J, Erb, T.J.
Deposit date:2023-09-25
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Adaptive laboratory evolution recruits the promiscuity of succinate semialdehyde dehydrogenase to repair different metabolic deficiencies
Nat Commun, 2024
8QMT
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BU of 8qmt by Molmil
Succinic semialdehyde dehydrogenase from E. coli with Q262R substitution and bound NAD+, succinic semialdehyde
Descriptor: 4-oxobutanoic acid, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Succinate semialdehyde dehydrogenase [NAD(P)+] Sad
Authors:He, H, Zarzycki, J, Erb, T.J.
Deposit date:2023-09-25
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Adaptive laboratory evolution recruits the promiscuity of succinate semialdehyde dehydrogenase to repair different metabolic deficiencies
Nat Commun, 2024
8QL3
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BU of 8ql3 by Molmil
Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution: 233 fs structure
Descriptor: Azo-Combretastatin A4 (cis), CALCIUM ION, Designed Ankyrin Repeat Protein (DARPIN) D1, ...
Authors:Weinert, T, Wranik, M, Seidel, H.-P, Church, J, Steinmetz, M.O, Schapiro, I, Standfuss, J.
Deposit date:2023-09-19
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution
To Be Published
8QLB
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BU of 8qlb by Molmil
Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution: 100 ns structure
Descriptor: Azo-Combretastatin A4 (trans), CALCIUM ION, Designed Ankyrin Repeat Protein (DARPIN) D1, ...
Authors:Weinert, T, Wranik, M, Seidel, H.-P, Church, J, Steinmetz, M.O, Schapiro, I, Standfuss, J.
Deposit date:2023-09-19
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution
To Be Published

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PDB entries from 2024-10-09

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