Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42550 results

4BGP
DownloadVisualize
BU of 4bgp by Molmil
Crystal structure of La Crosse virus nucleoprotein
Descriptor: GLYCEROL, NUCLEOPROTEIN, SULFATE ION
Authors:Reguera, J, Malet, H, Weber, F, Cusack, S.
Deposit date:2013-03-28
Release date:2013-04-24
Last modified:2013-05-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for Encapsidation of Genomic RNA by La Crosse Orthobunyavirus Nucleoprotein
Proc.Natl.Acad.Sci.USA, 110, 2013
4B0R
DownloadVisualize
BU of 4b0r by Molmil
Structure of the Deamidase-Depupylase Dop of the Prokaryotic Ubiquitin-like Modification Pathway
Descriptor: DEAMIDASE-DEPUPYLASE DOP
Authors:Ozcelik, D, Barandun, J, Schmitz, N, Sutter, M, Guth, E, Damberger, F.F, Allain, F.H.-T, Ban, N, Weber-Ban, E.
Deposit date:2012-07-04
Release date:2012-09-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of Pup ligase PafA and depupylase Dop from the prokaryotic ubiquitin-like modification pathway.
Nat Commun, 3, 2012
4B0T
DownloadVisualize
BU of 4b0t by Molmil
Structure of the Pup Ligase PafA of the Prokaryotic Ubiquitin-like Modification Pathway in Complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PUP--PROTEIN LIGASE
Authors:Ozcelik, D, Barandun, J, Schmitz, N, Sutter, M, Guth, E, Damberger, F.F, Allain, F.H.-T, Ban, N, Weber-Ban, E.
Deposit date:2012-07-04
Release date:2012-09-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.159 Å)
Cite:Structures of Pup Ligase Pafa and Depupylase Dop from the Prokaryotic Ubiquitin-Like Modification Pathway.
Nat.Commun., 3, 2012
4B5H
DownloadVisualize
BU of 4b5h by Molmil
Substate bound inactive mutant of Neisseria AP endonuclease in presence of metal ions
Descriptor: 5'-D(*CP*GP*AP*TP*GP*GP*GP*TP*AP*GP*CP)-3', 5'-D(*GP*CP*TP*AP*CP*3DRP*CP*AP*TP*CP*GP)-3', MANGANESE (II) ION, ...
Authors:Lu, D, Silhan, J, MacDonald, J.T, Carpenter, E.P, Jensen, K, Tang, C.M, Baldwin, G.S, Freemont, P.S.
Deposit date:2012-08-03
Release date:2012-10-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structural basis for the recognition and cleavage of abasic DNA in Neisseria meningitidis.
Proc. Natl. Acad. Sci. U.S.A., 109, 2012
4B5M
DownloadVisualize
BU of 4b5m by Molmil
Neisseria AP endonuclease bound to the substrate with a cytosine orphan base
Descriptor: 5'-D(*3DRP*CP*AP*TP*CP*GP)-3', 5'-D(*CP*GP*AP*TP*GP*CP*GP*TP*AP*GP*CP)-3', 5'-D(*GP*CP*TP*AP*CP)-3', ...
Authors:Lu, D, Silhan, J, MacDonald, J.T, Carpenter, E.P, Jensen, K, Tang, C.M, Baldwin, G.S, Freemont, P.S.
Deposit date:2012-08-06
Release date:2012-10-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.758 Å)
Cite:Structural basis for the recognition and cleavage of abasic DNA in Neisseria meningitidis.
Proc. Natl. Acad. Sci. U.S.A., 109, 2012
4BIJ
DownloadVisualize
BU of 4bij by Molmil
Threading model of T7 large terminase
Descriptor: DNA MATURASE B
Authors:Dauden, M.I, Martin-Benito, J, Sanchez-Ferrero, J.C, Pulido-Cid, M, Valpuesta, J.M, Carrascosa, J.L.
Deposit date:2013-04-10
Release date:2013-05-08
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (16 Å)
Cite:Large Terminase Conformational Change Induced by Connector Binding in Bacteriophage T7
J.Biol.Chem., 288, 2013
4BEV
DownloadVisualize
BU of 4bev by Molmil
ATPase crystal structure with bound phosphate analogue
Descriptor: COPPER EFFLUX ATPASE, MAGNESIUM ION, TRIFLUOROMAGNESATE
Authors:Mattle, D, Drachmann, N.D, Liu, X.Y, Gourdon, P, Pedersen, B.P, Morth, P, Wang, J, Nissen, P.
Deposit date:2013-03-12
Release date:2014-04-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.583 Å)
Cite:ATPase Crystal Structure with Bound Phosphate Analogue
To be Published
4BEC
DownloadVisualize
BU of 4bec by Molmil
MUTANT (K220A) OF THE HSDR SUBUNIT OF THE ECOR124I RESTRICTION ENZYME IN COMPLEX WITH ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, TYPE I RESTRICTION ENZYME HSDR
Authors:Csefalvay, E, Lapkouski, M, Guzanova, A, Csefalvay, L, Baikova, T, Shevelev, I, Janscak, P, Smatanova, I.K, Panjikar, S, Carey, J, Weiserova, M, Ettrich, R.
Deposit date:2013-03-07
Release date:2014-03-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Functional Coupling of Duplex Translocation to DNA Cleavage in a Type I Restriction Enzyme.
Plos One, 10, 2015
1USQ
DownloadVisualize
BU of 1usq by Molmil
Complex of E. Coli DraE adhesin with Chloramphenicol
Descriptor: 1,2-ETHANEDIOL, CHLORAMPHENICOL, DR HEMAGGLUTININ STRUCTURAL SUBUNIT, ...
Authors:Anderson, K.L, Billington, J, Pettigrew, D, Cota, E, Roversi, P, Simpson, P, Chen, H.A, Urvil, P, Dumerle, L, Barlow, P, Medof, E, Smith, R.A.G, Nowicki, B, Le Bouguenec, C, Lea, S.M, Matthews, S.
Deposit date:2003-11-27
Release date:2004-08-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:High Resolution Studies of the Afa/Dr Adhesin Drae and its Interaction with Chloramphenicol
J.Biol.Chem., 279, 2004
4NQV
DownloadVisualize
BU of 4nqv by Molmil
Crystal Structure of HLA A*0101 in complex with NP44, an 9-mer influenza epitope
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-1 alpha chain, ...
Authors:Rossjohn, J, Gras, S.
Deposit date:2013-11-25
Release date:2013-12-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Preexisting CD8+ T-cell immunity to the H7N9 influenza A virus varies across ethnicities.
Proc.Natl.Acad.Sci.USA, 111, 2014
4BE7
DownloadVisualize
BU of 4be7 by Molmil
MUTANT (K220R) OF THE HSDR SUBUNIT OF THE ECOR124I RESTRICTION ENZYME IN COMPLEX WITH ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Csefalvay, E, Lapkouski, M, Guzanova, A, Csefalvay, L, Baikova, T, Shevelev, I, Janscak, P, Smatanova, I.K, Panjikar, S, Carey, J, Weiserova, M, Ettrich, R.
Deposit date:2013-03-06
Release date:2014-03-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.744 Å)
Cite:Functional Coupling of Duplex Translocation to DNA Cleavage in a Type I Restriction Enzyme.
Plos One, 10, 2015
1UN2
DownloadVisualize
BU of 1un2 by Molmil
Crystal structure of circularly permuted CPDSBA_Q100T99: Preserved Global Fold and Local Structural Adjustments
Descriptor: THIOL-DISULFIDE INTERCHANGE PROTEIN
Authors:Manjasetty, B.A, Hennecke, J, Glockshuber, R, Heinemann, U.
Deposit date:2003-09-03
Release date:2003-09-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of Circularly Permuted Dsba(Q100T99): Preserved Global Fold and Local Structural Adjustments
Acta Crystallogr.,Sect.D, 60, 2004
1QOZ
DownloadVisualize
BU of 1qoz by Molmil
Catalytic core domain of acetyl xylan esterase from Trichoderma reesei
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYL XYLAN ESTERASE
Authors:Hakulinen, N, Rouvinen, J.
Deposit date:1999-11-25
Release date:2000-11-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Three-Dimensional Structure of the Catalytic Core of Acetylxylan Esterase from Trichoderma Reesei: Insights Into the Deacetylation Mechanism
J.Struct.Biol., 132, 2000
1UT1
DownloadVisualize
BU of 1ut1 by Molmil
DraE adhesin from Escherichia Coli
Descriptor: 1,2-ETHANEDIOL, DR HEMAGGLUTININ STRUCTURAL SUBUNIT, SULFATE ION
Authors:Anderson, K.L, Billington, J, Pettigrew, D, Cota, E, Roversi, P, Simpson, P, Chen, H.A, Urvil, P, Dumerle, L, Barlow, P, Medof, E, Smith, R.A.G, Nowicki, B, Le Bouguenec, C, Lea, S.M, Matthews, S.
Deposit date:2003-12-02
Release date:2004-08-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:High Resolution Studies of the Afa/Dr Adhesin Drae and its Interaction with Chloramphenicol
J.Biol.Chem., 279, 2004
4NX1
DownloadVisualize
BU of 4nx1 by Molmil
Crystal structure of a trap periplasmic solute binding protein from Sulfitobacter sp. nas-14.1, target EFI-510292, with bound alpha-D-taluronate
Descriptor: C4-dicarboxylate transport system substrate-binding protein, alpha-D-talopyranuronic acid
Authors:Vetting, M.W, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Stead, M, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-12-08
Release date:2014-01-22
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015
4O45
DownloadVisualize
BU of 4o45 by Molmil
WDR5 in complex with influenza NS1 C-terminal tail
Descriptor: Nonstructural protein 1, UNKNOWN ATOM OR ION, WD repeat-containing protein 5
Authors:Qin, S, Xu, C, Tempel, W, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2013-12-18
Release date:2014-04-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural basis for histone mimicry and hijacking of host proteins by influenza virus protein NS1.
Nat Commun, 5, 2014
4O2W
DownloadVisualize
BU of 4o2w by Molmil
Crystal structure of the third RCC1-like domain of HERC1
Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase HERC1, MAGNESIUM ION, ...
Authors:Dong, A, Hu, J, Li, Y, Walker, J.R, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Tong, Y, Structural Genomics Consortium (SGC)
Deposit date:2013-12-17
Release date:2014-01-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the third RCC1-like domain of HERC1
To be Published
4O34
DownloadVisualize
BU of 4o34 by Molmil
Room temperature macromolecular serial crystallography using synchrotron radiation
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Stellato, F, Oberthuer, D, Liang, M, Bean, R, Gati, C, Yefanov, O, Barty, A, Burkhardt, A, Fischer, P, Galli, L, Kirian, R.A, Mayer, J, Pannerselvam, S, Yoon, C.H, Chervinskii, F, Speller, E, White, T.A, Betzel, C, Meents, A, Chapman, H.N.
Deposit date:2013-12-18
Release date:2014-06-11
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Room-temperature macromolecular serial crystallography using synchrotron radiation.
IUCrJ, 1, 2014
4O46
DownloadVisualize
BU of 4o46 by Molmil
14-3-3-gamma in complex with influenza NS1 C-terminal tail phosphorylated at S228
Descriptor: 14-3-3 protein gamma, Nonstructural protein 1, UNKNOWN ATOM OR ION, ...
Authors:Qin, S, Liu, Y, Tempel, W, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2013-12-18
Release date:2014-04-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for histone mimicry and hijacking of host proteins by influenza virus protein NS1.
Nat Commun, 5, 2014
4O42
DownloadVisualize
BU of 4o42 by Molmil
Tandem chromodomains of human CHD1 in complex with influenza NS1 C-terminal tail dimethylated at K229
Descriptor: Chromodomain-helicase-DNA-binding protein 1, GLYCEROL, Nonstructural protein 1, ...
Authors:Qin, S, Xu, C, Tempel, W, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2013-12-18
Release date:2014-04-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural basis for histone mimicry and hijacking of host proteins by influenza virus protein NS1.
Nat Commun, 5, 2014
1UT2
DownloadVisualize
BU of 1ut2 by Molmil
AfaE-3 adhesin from Escherichia Coli
Descriptor: AFIMBRIAL ADHESIN AFA-III, SULFATE ION
Authors:Anderson, K.L, Billington, J, Pettigrew, D, Cota, E, Roversi, P, Simpson, P, Chen, H.A, Urvil, P, Dumerle, L, Barlow, P, Medof, E, Smith, R.A.G, Nowicki, B, Le Bouguenec, C, Lea, S.M, Matthews, S.
Deposit date:2003-12-02
Release date:2004-08-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:High Resolution Studies of the Afa/Dr Adhesin Drae and its Interaction with Chloramphenicol
J.Biol.Chem., 279, 2004
4O94
DownloadVisualize
BU of 4o94 by Molmil
Crystal structure of a trap periplasmic solute binding protein from Rhodopseudomonas palustris HaA2 (RPB_3329), Target EFI-510223, with bound succinate
Descriptor: CHLORIDE ION, SUCCINIC ACID, TRAP dicarboxylate transporter DctP subunit
Authors:Vetting, M.W, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Stead, M, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-01-01
Release date:2014-01-22
Last modified:2015-02-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015
4O7S
DownloadVisualize
BU of 4o7s by Molmil
SAICAR synthetase (Type-2) in complex with TMP/TDP
Descriptor: ACETATE ION, PHOSPHATE ION, Phosphoribosylaminoimidazole-succinocarboxamide synthase, ...
Authors:Manjunath, K, Jeyakanthan, J, Sekar, K.
Deposit date:2013-12-26
Release date:2014-12-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:SAICAR synthetase (Type-2) in complex with TMP/TDP
To be Published
4O86
DownloadVisualize
BU of 4o86 by Molmil
SAICAR synthetase (Type-2) in complex with ADP and CDP
Descriptor: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, CYTIDINE-5'-DIPHOSPHATE, ...
Authors:Manjunath, K, Jeyakanthan, J, Sekar, K.
Deposit date:2013-12-26
Release date:2014-12-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:SAICAR synthetase (Type-2) in complex with ADP and CDP
To be Published
4OMO
DownloadVisualize
BU of 4omo by Molmil
Crystal structure of the c-Src tyrosine kinase SH3 domain mutant Q128E
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, NICKEL (II) ION, Proto-oncogene tyrosine-protein kinase Src
Authors:Camara-Artigas, A, Bacarizo, J.
Deposit date:2014-01-27
Release date:2014-12-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Electrostatic Effects in the Folding of the SH3 Domain of the c-Src Tyrosine Kinase: pH-Dependence in 3D-Domain Swapping and Amyloid Formation.
Plos One, 9, 2014

224004

数据于2024-08-21公开中

PDB statisticsPDBj update infoContact PDBjnumon