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PDB: 42550 results

3ZXG
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BU of 3zxg by Molmil
lysenin sphingomyelin complex
Descriptor: LYSENIN, SULFATE ION, TRIMETHYL-[2-[[(2S,3S)-2-(OCTADECANOYLAMINO)-3-OXIDANYL-BUTOXY]-OXIDANYL-PHOSPHORYL]OXYETHYL]AZANIUM
Authors:De Colibus, L, Sonnen, A.F.P, Morris, K.J, Siebert, C.A, Abrusci, P, Plitzko, J, Hodnik, V, Leippe, M, Volpi, E, Anderluh, G, Gilbert, R.J.C.
Deposit date:2011-08-10
Release date:2012-09-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.12 Å)
Cite:Structures of Lysenin Reveal a Shared Evolutionary Origin for Pore-Forming Proteins and its Mode of Sphingomyelin Recognition.
Structure, 20, 2012
3JTO
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BU of 3jto by Molmil
Crystal structure of the c-terminal domain of YpbH
Descriptor: Adapter protein mecA 2
Authors:Wang, F, Mei, Z, Qi, Y, Yan, C, Wang, J, Shi, Y.
Deposit date:2009-09-14
Release date:2009-09-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of the MecA Degradation Tag
To be Published
3ZS4
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BU of 3zs4 by Molmil
CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS PHOSPHORIBOSYL ISOMERASE WITH BOUND PRFAR
Descriptor: PHOSPHORIBOSYL ISOMERASE A, PHOSPHORIC ACID MONO-[5-({[5-CARBAMOYL-3-(5-PHOSPHONOOXY-5-DEOXY-RIBOFURANOSYL)- 3H-IMIDAZOL-4-YLAMINO]-METHYL}-AMINO)-2,3,4-TRIHYDROXY-PENTYL] ESTER
Authors:Due, A.V, Kuper, J, Geerlof, A, Wilmanns, M.
Deposit date:2011-06-22
Release date:2012-07-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Mycobacterium Tuberculosis Phosphoribosyl Isomerase with Bound Prfar
To be Published
3JV9
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BU of 3jv9 by Molmil
The structure of a reduced form of OxyR from N. meningitidis
Descriptor: CHLORIDE ION, Transcriptional regulator, LysR family
Authors:Sainsbury, S, Ren, J, Stuart, D.I, Owens, R.J, Oxford Protein Production Facility (OPPF)
Deposit date:2009-09-16
Release date:2010-06-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:The structure of a reduced form of OxyR from Neisseria meningitidis
Bmc Struct.Biol., 10, 2010
1NVB
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BU of 1nvb by Molmil
Crystal structure of 3-dehydroquinate synthase (DHQS) in complex with ZN2+ and carbaphosphonate
Descriptor: 3-DEHYDROQUINATE SYNTHASE, CHLORIDE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Nichols, C.E, Ren, J, Lamb, H.K, Hawkins, A.R, Stammers, D.K.
Deposit date:2003-02-03
Release date:2003-03-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Ligand-induced Conformational Changes and a Mechanism for Domain Closure in Aspergillus nidulans Dehydroquinate Synthase
J.MOL.BIOL., 327, 2003
3ZMZ
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LSD1-CoREST in complex with PRSFAV peptide
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A, PEPTIDE, ...
Authors:Tortorici, M, Borrello, M.T, Tardugno, M, Chiarelli, L.R, Pilotto, S, Ciossani, G, Vellore, N.A, Cowan, J, O'Connell, M, Mai, A, Baron, R, Ganesan, A, Mattevi, A.
Deposit date:2013-02-13
Release date:2013-06-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Protein Recognition by Small Peptide Reversible Inhibitors of the Chromatin-Modifying Lsd1/Corest Lysine Demethylase.
Acs Chem.Biol., 8, 2013
3ZOW
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Crystal Structure of Wild Type Nitrosomonas europaea Cytochrome c552
Descriptor: CYTOCHROME C-552, HEME C
Authors:Hersleth, H.-P, Can, M, Krucinska, J, Zoppellaro, G, Andersen, N.H, Karlsen, S, Wedekind, J.E, Andersson, K.K, Bren, K.L.
Deposit date:2013-02-25
Release date:2013-08-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural Characterization of Nitrosomonas Europaea Cytochrome C-552 Variants with Marked Differences in Electronic Structure.
Chembiochem, 14, 2013
3ZON
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BU of 3zon by Molmil
Human TYK2 pseudokinase domain bound to a kinase inhibitor
Descriptor: 5-PHENYL-2-UREIDOTHIOPHENE-3-CARBOXAMIDE, NON-RECEPTOR TYROSINE-PROTEIN KINASE TYK2
Authors:Elkins, J.M, Wang, J, Krojer, T, Savitsky, P, Chalk, R, Daga, N, Salah, E, Berridge, G, Picaud, S, von Delft, F, Bountra, C, Edwards, A, Knapp, S.
Deposit date:2013-02-22
Release date:2013-04-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Human Tyk2 Pseudokinase Domain Bound to a Kinase Inhibitor
To be Published
4JZT
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BU of 4jzt by Molmil
Crystal structure of the Bacillus subtilis pyrophosphohydrolase BsRppH (E68A mutant) bound to GTP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, dGTP pyrophosphohydrolase
Authors:Piton, J, Larue, V, Thillier, Y, Dorleans, A, Pellegrini, O, Li de la Sierra-Gallay, I, Vasseur, J.J, Debart, F, Tisne, C, Condon, C.
Deposit date:2013-04-03
Release date:2013-05-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Bacillus subtilis RNA deprotection enzyme RppH recognizes guanosine in the second position of its substrates.
Proc.Natl.Acad.Sci.USA, 110, 2013
3ZOR
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BU of 3zor by Molmil
Structure of BsUDG
Descriptor: URACIL-DNA GLYCOSYLASE
Authors:Banos-Sanz, J.I, Mojardin, L, Sanz-Aparicio, J, Gonzalez, B, Salas, M.
Deposit date:2013-02-22
Release date:2013-05-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal Structure and Functional Insights Into Uracil-DNA Glycosylase Inhibition by Phage Phi29 DNA Mimic Protein P56
Nucleic Acids Res., 41, 2013
3K3D
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BU of 3k3d by Molmil
The N-terminal PAS domain crystal structure of RV1364C from Mycobacterium Tuberculosis at 2.3 angstrom
Descriptor: Protein Rv1364c/MT1410
Authors:King-Scott, J, Panjikar, S, Tucker, P.A.
Deposit date:2009-10-02
Release date:2010-09-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The N-Terminal Pas Domain Crystal Structure of Rv1364C from Mycobacterium Tuberculosis at 2.3 Angstrom.
To be Published
3ZOX
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BU of 3zox by Molmil
Crystal Structure of N64Del Mutant of Nitrosomonas europaea Cytochrome c552 (monoclinic space group)
Descriptor: CYTOCHROME C-552, HEME C
Authors:Hersleth, H.-P, Can, M, Krucinska, J, Zoppellaro, G, Andersen, N.H, Wedekind, J.E, Andersson, K.K, Bren, K.L.
Deposit date:2013-02-26
Release date:2013-08-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Characterization of Nitrosomonas Europaea Cytochrome C-552 Variants with Marked Differences in Electronic Structure.
Chembiochem, 14, 2013
3K3H
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BU of 3k3h by Molmil
Crystal structure of the PDE9A catalytic domain in complex with (S)-BAY73-6691
Descriptor: 1-(2-chlorophenyl)-6-[(2S)-3,3,3-trifluoro-2-methylpropyl]-1,7-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one, High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, MAGNESIUM ION, ...
Authors:Wang, H, Luo, X, Ye, M, Hou, J, Robinson, H, Ke, H.
Deposit date:2009-10-02
Release date:2010-02-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Insight into Binding of Phosphodiesterase-9A Selective Inhibitors by Crystal Structures and Mutagenesis
J.Med.Chem., 53, 2010
3J3O
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BU of 3j3o by Molmil
Conformational Shift of a Major Poliovirus Antigen Confirmed by Immuno-Cryogenic Electron Microscopy: 160S Poliovirus and C3-Fab Complex
Descriptor: C3 antibody, heavy chain, light chain, ...
Authors:Lin, J, Cheng, N, Hogle, J.M, Steven, A.C, Belnap, D.M.
Deposit date:2013-04-10
Release date:2013-07-03
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (11.1 Å)
Cite:Conformational shift of a major poliovirus antigen confirmed by immuno-cryogenic electron microscopy.
J.Immunol., 191, 2013
3J68
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BU of 3j68 by Molmil
Structural mechanism of the dynein powerstroke (pre-powerstroke state)
Descriptor: Dynein motor domain
Authors:Lin, J, Okada, K, Raytchev, M, Smith, M.C, Nicastro, D.
Deposit date:2013-12-23
Release date:2014-04-23
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (30 Å)
Cite:Structural mechanism of the dynein power stroke.
Nat.Cell Biol., 16, 2014
3ZJM
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BU of 3zjm by Molmil
Ile(149)G11Phe mutation of M.acetivorans protoglobin in complex with cyanide
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CYANIDE ION, GLYCEROL, ...
Authors:Pesce, A, Tilleman, L, Donne, J, Aste, E, Ascenzi, P, Ciaccio, C, Coletta, M, Moens, L, Viappiani, C, Dewilde, S, Bolognesi, M, Nardini, M.
Deposit date:2013-01-18
Release date:2013-06-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure and Haem-Distal Site Plasticity in Methanosarcina Acetivorans Protoglobin.
Plos One, 8, 2013
1TTD
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BU of 1ttd by Molmil
SOLUTION-STATE STRUCTURE OF A DNA DODECAMER DUPLEX CONTAINING A CIS-SYN THYMINE CYCLOBUTANE DIMER
Descriptor: DNA (5'-D(*CP*TP*TP*AP*AP*TP*TP*CP*GP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*CP*GP*AP*AP*(TTD)P*AP*AP*G)-3')
Authors:Mcateer, K, Jing, Y, Kao, J, Taylor, J.-S, Kennedy, M.A.
Deposit date:1999-01-20
Release date:1999-02-02
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution-state structure of a DNA dodecamer duplex containing a Cis-syn thymine cyclobutane dimer, the major UV photoproduct of DNA.
J.Mol.Biol., 282, 1998
3J9Z
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BU of 3j9z by Molmil
Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Li, W, Liu, Z, Koripella, R.K, Langlois, R, Sanyal, S, Frank, J.
Deposit date:2015-03-27
Release date:2015-07-01
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Activation of GTP hydrolysis in mRNA-tRNA translocation by elongation factor G.
Sci Adv, 1, 2015
3ZXD
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BU of 3zxd by Molmil
wild-type lysenin
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, GLYCEROL, ...
Authors:De Colibus, L, Sonnen, A.F.P, Morris, K.J, Siebert, C.A, Abrusci, P, Plitzko, J, Hodnik, V, Leippe, M, Volpi, E, Anderluh, G, Gilbert, R.J.C.
Deposit date:2011-08-09
Release date:2012-09-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structures of Lysenin Reveal a Shared Evolutionary Origin for Pore-Forming Proteins and its Mode of Sphingomyelin Recognition.
Structure, 20, 2012
3K7H
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BU of 3k7h by Molmil
Crystal structure of the E95K mutant of the Indian Hedgehog N-terminal signalling domain
Descriptor: Indian hedgehog protein, SULFATE ION, ZINC ION
Authors:He, Y.-X, Kang, Y, Zhang, W.J, Yu, J, Ma, G, Zhou, C.-Z.
Deposit date:2009-10-13
Release date:2011-01-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of the E95K mutant of the Indian Hedgehog N-terminal signalling domain
To be Published
3ZY6
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BU of 3zy6 by Molmil
Crystal structure of POFUT1 in complex with GDP-fucose (crystal-form-II)
Descriptor: GUANOSINE-5'-DIPHOSPHATE-BETA-L-FUCOPYRANOSE, PUTATIVE GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1
Authors:Lira-Navarrete, E, Valero-Gonzalez, J, Villanueva, R, Martinez-Julvez, M, Tejero, T, Merino, P, Panjikar, S, Hurtado-Guerrero, R.
Deposit date:2011-08-17
Release date:2011-09-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structural Insights Into the Mechanism of Protein O-Fucosylation.
Plos One, 6, 2011
3K7X
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BU of 3k7x by Molmil
Crystal structure of the Lin0763 protein from Listeria innocua. Northeast Structural Genomics Consortium Target LkR23.
Descriptor: Lin0763 protein, PHOSPHATE ION
Authors:Vorobiev, S, Su, M, Seetharaman, J, Maglaqui, M, Ciccosanti, C, Buchwald, W.A, Sahdev, S, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-10-13
Release date:2009-10-27
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (1.889 Å)
Cite:Crystal structure of the Lin0763 protein from Listeria innocua.
To be Published
3ZXN
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BU of 3zxn by Molmil
Moorella thermoacetica RsbS S58E
Descriptor: ANTI-SIGMA-FACTOR ANTAGONIST (STAS) DOMAIN PROTEIN, THIOCYANATE ION
Authors:Quin, M.B, Berrisford, J.M, Newman, J.A, Basle, A, Lewis, R.J, Marles-Wright, J.
Deposit date:2011-08-12
Release date:2012-02-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Bacterial Stressosome: A Modular System that Has Been Adapted to Control Secondary Messenger Signaling.
Structure, 20, 2012
3ZY3
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BU of 3zy3 by Molmil
Crystal structure of POFUT1 in complex with GDP (crystal-form-III)
Descriptor: GUANOSINE-5'-DIPHOSPHATE, PUTATIVE GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1, SULFATE ION
Authors:Lira-Navarrete, E, Valero-Gonzalez, J, Villanueva, R, Martinez-Julvez, M, Tejero, T, Merino, P, Panjikar, S, Hurtado-Guerrero, R.
Deposit date:2011-08-17
Release date:2011-09-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structural Insights Into the Mechanism of Protein O-Fucosylation.
Plos One, 6, 2011
3J67
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BU of 3j67 by Molmil
Structural mechanism of the dynein powerstroke (post-powerstroke state)
Descriptor: Dynein motor domain
Authors:Lin, J, Okada, K, Raytchev, M, Smith, M.C, Nicastro, D.
Deposit date:2013-12-22
Release date:2014-04-23
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (34 Å)
Cite:Structural mechanism of the dynein power stroke.
Nat.Cell Biol., 16, 2014

224004

数据于2024-08-21公开中

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