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PDB: 42880 results

5L8V
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BU of 5l8v by Molmil
Apo-structure of humanised RadA-mutant humRadA4
Descriptor: DNA repair and recombination protein RadA, PHOSPHATE ION
Authors:Marsh, M, Fischer, G, Moschetti, T, Sharpe, T, Scott, D, Morgan, M, Ng, H, Skidmore, J, Venkitaraman, A, Abell, C, Blundell, T.L, Hyvonen, M.
Deposit date:2016-06-08
Release date:2016-10-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Engineering Archeal Surrogate Systems for the Development of Protein-Protein Interaction Inhibitors against Human RAD51.
J.Mol.Biol., 428, 2016
1N2R
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BU of 1n2r by Molmil
A natural selected dimorphism in HLA B*44 alters self, peptide reportoire and T cell recognition.
Descriptor: ACETIC ACID, Beta-2-microglobulin, HLA DPA*0201 PEPTIDE, ...
Authors:Macdonald, W.A, Purcell, A.W, Williams, D.S, Mifsud, N, Ely, L.K, Gorman, J.J, Clements, C.S, Kjer-Nielsen, L, Koelle, D.M, Brooks, A.G, Lovrecz, G.O, Lu, L, Rossjohn, J, McCluskey, J.
Deposit date:2002-10-24
Release date:2004-03-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A naturally selected dimorphism within the HLA-B44 supertype alters class I structure, peptide repertoire, and T cell recognition.
J.Exp.Med., 198, 2003
2HUZ
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BU of 2huz by Molmil
Crystal structure of GNPNAT1
Descriptor: Glucosamine 6-phosphate N-acetyltransferase
Authors:Min, J, Wu, H, Zeng, H, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
Deposit date:2006-07-27
Release date:2006-08-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Crystal structure of glucosamine-phosphate N-acetyltransferase 1
To be Published
5LA5
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BU of 5la5 by Molmil
Room temperature X-ray diffraction of tetragonal HEWL. Second data set (0.62 MGy)
Descriptor: ACETATE ION, CHLORIDE ION, Lysozyme C
Authors:Castellvi, A, Juanhuix, J.
Deposit date:2016-06-13
Release date:2016-12-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Uridine as a new scavenger for synchrotron-based structural biology techniques.
J Synchrotron Radiat, 24, 2017
5L89
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BU of 5l89 by Molmil
Crystal structure of Rhodospirillum rubrum Rru_A0973 mutant E32A
Descriptor: CALCIUM ION, Rru_A0973
Authors:He, D, Hughes, S, Vanden-Hehir, S, Georgiev, A, Altenbach, K, Tarrant, E, Mackay, C.L, Waldron, K.J, Clarke, D.J, Marles-Wright, J.
Deposit date:2016-06-07
Release date:2016-08-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structural characterization of encapsulated ferritin provides insight into iron storage in bacterial nanocompartments.
Elife, 5, 2016
7WRH
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BU of 7wrh by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron BA.1 spike protein in complex with mouse ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
Authors:Han, P, Xie, Y, Qi, J.
Deposit date:2022-01-26
Release date:2023-02-01
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:Broader-species receptor binding and structural bases of Omicron SARS-CoV-2 to both mouse and palm-civet ACE2s.
Cell Discov, 8, 2022
5LAU
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BU of 5lau by Molmil
Oceanobacillus iheyensis macrodomain mutant G37V with ADPR
Descriptor: GLYCEROL, MacroD-type macrodomain, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Gil-Ortiz, F, Zapata-Perez, R, Martinez, A.B, Juanhuix, J, Sanchez-Ferrer, A.
Deposit date:2016-06-15
Release date:2017-05-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural and functional analysis of Oceanobacillus iheyensis macrodomain reveals a network of waters involved in substrate binding and catalysis.
Open Biol, 7, 2017
3T7K
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BU of 3t7k by Molmil
Complex structure of Rtt107p and phosphorylated histone H2A
Descriptor: Histone H2A.1, Regulator of Ty1 transposition protein 107
Authors:Li, X, Li, F, Wu, J, Shi, Y.
Deposit date:2011-07-30
Release date:2012-02-15
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.028 Å)
Cite:Structure of C-terminal Tandem BRCT Repeats of Rtt107 Protein Reveals Critical Role in Interaction with Phosphorylated Histone H2A during DNA Damage Repair
J.Biol.Chem., 287, 2012
5LB4
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BU of 5lb4 by Molmil
Apo-structure of humanised RadA-mutant humRadA14
Descriptor: DNA repair and recombination protein RadA
Authors:Marsh, M, Fischer, G, Moschetti, T, Sharpe, T, Scott, D, Morgan, M, Ng, H, Skidmore, J, Venkitaraman, A, Abell, C, Blundell, T.L, Hyvonen, M.
Deposit date:2016-06-15
Release date:2016-10-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Engineering Archeal Surrogate Systems for the Development of Protein-Protein Interaction Inhibitors against Human RAD51.
J.Mol.Biol., 428, 2016
2HX0
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BU of 2hx0 by Molmil
Three-dimensional structure of the hypothetical protein from Salmonella cholerae-suis (aka Salmonella enterica) at the resolution 1.55 A. Northeast Structural Genomics target ScR59.
Descriptor: MAGNESIUM ION, Putative DNA-binding protein
Authors:Kuzin, A.P, Abashidze, M, Seetharaman, J, Shastry, R, Conover, K, Ma, L.C, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-08-02
Release date:2006-09-19
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Three-dimensional structure of the hypothetical protein from Salmonella cholerae-suis (aka Salmonella enterica) at the resolution 1.55 A. Northeast Structural Genomics target ScR59.
To be Published
7W5N
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BU of 7w5n by Molmil
The crystal structure of the reduced form of Gluconobacter oxydans WSH-004 SNDH
Descriptor: L-sorbosone dehydrogenase, NAD(P) dependent, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Li, D, Hou, X.D, Rao, Y.J, Yin, D.J, Zhou, J.W, Chen, J.
Deposit date:2021-11-30
Release date:2023-03-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.988 Å)
Cite:Structural Insight into the Catalytic Mechanisms of an L-Sorbosone Dehydrogenase.
Adv Sci, 10, 2023
7W5K
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BU of 7w5k by Molmil
The C296A mutant of L-sorbosone dehydrogenase (SNDH) from Gluconobacter Oxydans WSH-004
Descriptor: L-sorbosone dehydrogenase, NAD(P) dependent, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Li, D, Hou, X.D, Rao, Y.J, Zhou, J.W, Chen, J.
Deposit date:2021-11-30
Release date:2023-03-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structural Insight into the Catalytic Mechanisms of an L-Sorbosone Dehydrogenase.
Adv Sci, 10, 2023
5KQW
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BU of 5kqw by Molmil
Directed Evolution of Transaminases By Ancestral Reconstruction. Using Old Proteins for New Chemistries
Descriptor: 1,2-ETHANEDIOL, 4-aminobutyrate transaminase, DI(HYDROXYETHYL)ETHER, ...
Authors:Wilding, M, Newman, J, Peat, T.S, Scott, C.
Deposit date:2016-07-06
Release date:2017-07-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Reverse engineering: transaminase biocatalyst development using ancestral sequence reconstruction
Green Chemistry, 19, 2017
2Q18
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BU of 2q18 by Molmil
2-keto-3-deoxy-D-arabinonate dehydratase
Descriptor: 2-keto-3-deoxy-D-arabinonate dehydratase, PHOSPHATE ION
Authors:Barends, T, Brouns, S, Worm, P, Akerboom, J, Turnbull, A, Salmon, L.
Deposit date:2007-05-24
Release date:2008-04-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insight into substrate binding and catalysis of a novel 2-keto-3-deoxy-D-arabinonate dehydratase illustrates common mechanistic features of the FAH superfamily.
J.Mol.Biol., 379, 2008
3T3A
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BU of 3t3a by Molmil
Crystal structure of H107R mutant of extracellular domain of mouse receptor NKR-P1A
Descriptor: Killer cell lectin-like receptor subfamily B member 1A, PHOSPHATE ION
Authors:Kolenko, P, Rozbesky, D, Bezouska, K, Hasek, J, Dohnalek, J.
Deposit date:2011-07-25
Release date:2011-08-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the H107R variant of the extracellular domain of mouse NKR-P1A at 2.3 A resolution.
Acta Crystallogr.,Sect.F, 67, 2011
7VYV
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BU of 7vyv by Molmil
Cryo-EM structure of Depo32, a Klebsiella phage depolymerase targets the K2 serotype K. pneumoniae
Descriptor: Depolymerase
Authors:Cai, R, Ren, Z, Zhao, R, Wang, X, Guo, Z, Du, R, Han, W, Ru, H, Gu, J.
Deposit date:2021-11-15
Release date:2023-08-30
Last modified:2024-09-11
Method:ELECTRON MICROSCOPY (2.32 Å)
Cite:Structural biology and functional features of phage-derived depolymerase Depo32 on Klebsiella pneumoniae with K2 serotype capsular polysaccharides.
Microbiol Spectr, 11, 2023
7VZ3
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BU of 7vz3 by Molmil
Cryo-EM structure of Depo32, a Klebsiella phage depolymerase targets the K2 serotype K. pneumoniae
Descriptor: Depolymerase
Authors:Cai, R, Ren, Z, Zhao, R, Wang, X, Guo, Z, Du, R, Han, W, Ru, H, Gu, J.
Deposit date:2021-11-15
Release date:2023-08-30
Last modified:2024-09-11
Method:ELECTRON MICROSCOPY (2.46 Å)
Cite:Structural biology and functional features of phage-derived depolymerase Depo32 on Klebsiella pneumoniae with K2 serotype capsular polysaccharides.
Microbiol Spectr, 11, 2023
1N46
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BU of 1n46 by Molmil
CRYSTAL STRUCTURE OF HUMAN TR BETA LIGAND-BINDING DOMAIN COMPLEXED WITH A POTENT SUBTYPE-SELECTIVE THYROMIMETIC
Descriptor: Thyroid hormone receptor Beta-1, [4-(4-HYDROXY-3-ISOPROPYL-PHENOXY)-3,5-DIMETHYL-PHENYL]-6-AZAURACIL
Authors:Dow, R.L, Schneider, S.R, Paight, E.S, Hank, R.F, Chiang, P, Cornelius, P, Lee, E, Newsome, W.P, Swick, A.G, Spitzer, J, Hargrove, D.M, Patterson, T.A, Pandit, J, Chrunyk, B.A, LeMotte, P.K, Danley, D.E, Rosner, M.H, Ammirati, M.J, Simons, S.P, Schulte, G.K, Tate, B.F, DaSilva-Jardine, P.
Deposit date:2002-10-30
Release date:2003-04-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of a Novel Series of 6-Azauracil-Based Thyroid Hormone Receptor Ligands: Potent, TRbeta Subtype-Selective Thyromimetics
Bioorg.Med.Chem.Lett., 13, 2003
2Q1A
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BU of 2q1a by Molmil
2-keto-3-deoxy-D-arabinonate dehydratase complexed with magnesium and 2-oxobutyrate
Descriptor: 2-KETOBUTYRIC ACID, 2-keto-3-deoxy-D-arabinonate dehydratase, MAGNESIUM ION
Authors:Barends, T, Brouns, S, Worm, P, Akerboom, J, Turnbull, A, Salmon, L.
Deposit date:2007-05-24
Release date:2008-04-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural insight into substrate binding and catalysis of a novel 2-keto-3-deoxy-D-arabinonate dehydratase illustrates common mechanistic features of the FAH superfamily.
J.Mol.Biol., 379, 2008
2Q9O
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BU of 2q9o by Molmil
Near-atomic resolution structure of a Melanocarpus albomyces laccase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Hakulinen, N, Rouvinen, J.
Deposit date:2007-06-13
Release date:2008-03-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:A near atomic resolution structure of a Melanocarpus albomyces laccase.
J.Struct.Biol., 162, 2008
3IYA
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BU of 3iya by Molmil
Association of the pr peptides with dengue virus blocks membrane fusion at acidic pH
Descriptor: Envelope protein, prM protein
Authors:Yu, I, Holdaway, H.A, Chipman, P.R, Kuhn, R.J, Rossmann, M.G, Chen, J.
Deposit date:2009-06-01
Release date:2010-04-14
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (22 Å)
Cite:Association of the pr peptides with dengue virus at acidic pH blocks membrane fusion.
J.Virol., 83, 2009
1YJI
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BU of 1yji by Molmil
RDC-refined Solution NMR structure of reduced putidaredoxin
Descriptor: FE2/S2 (INORGANIC) CLUSTER, Putidaredoxin
Authors:Jain, N.U, Tjioe, E, Savidor, A, Boulie, J.
Deposit date:2005-01-14
Release date:2005-06-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Redox-dependent structural differences in putidaredoxin derived from homologous structure refinement via residual dipolar couplings.
Biochemistry, 44, 2005
1KKL
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BU of 1kkl by Molmil
L.casei HprK/P in complex with B.subtilis HPr
Descriptor: CALCIUM ION, HprK protein, PHOSPHOCARRIER PROTEIN HPR
Authors:Fieulaine, S, Morera, S, Poncet, S, Galinier, A, Janin, J, Deutscher, J, Nessler, S.
Deposit date:2001-12-10
Release date:2002-08-28
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:X-ray structure of a bifunctional protein kinase in complex with its protein substrate HPr.
Proc.Natl.Acad.Sci.USA, 99, 2002
7WZE
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BU of 7wze by Molmil
Structure of Transcriptional regulator from Bacillus subtilis (strain 168)
Descriptor: Uncharacterized HTH-type transcriptional regulator YetL
Authors:Hong, M, Park, J.
Deposit date:2022-02-17
Release date:2022-04-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure-based molecular characterization of the YetL transcription factor from Bacillus subtilis.
Biochem.Biophys.Res.Commun., 607, 2022
1YJJ
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BU of 1yjj by Molmil
RDC-refined Solution NMR structure of oxidized putidaredoxin
Descriptor: FE2/S2 (INORGANIC) CLUSTER, Putidaredoxin
Authors:Jain, N.U, Tjioe, E, Savidor, A, Boulie, J.
Deposit date:2005-01-14
Release date:2005-06-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Redox-dependent structural differences in putidaredoxin derived from homologous structure refinement via residual dipolar couplings.
Biochemistry, 44, 2005

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