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PDB: 42880 件

4INK
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Crystal structure of SplD protease from Staphylococcus aureus at 1.56 A resolution
分子名称: Serine protease SplD
著者Zdzalik, M, Kalinska, M, Cichon, P, Wysocka, M, Stec-Niemczyk, J, Stennicke, H.R, Jabaiah, A, Markiewicz, M, Wladyka, B, Daugherty, P.S, Lesner, A, Rolka, K, Dubin, A, Potempa, J, Dubin, G.
登録日2013-01-04
公開日2013-10-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Biochemical and Structural Characterization of SplD Protease from Staphylococcus aureus.
Plos One, 8, 2013
3ZP0
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INFLUENZA VIRUS (VN1194) H5 HA with LSTa
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, HEMAGGLUTININ, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose
著者Liu, J, Stevens, D.J, Gamblin, S.J, Skehel, J.J.
登録日2013-02-26
公開日2013-10-02
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Changes in the Hemagglutinin of H5N1 Viruses During Human Infection - Influence on Receptor Binding.
Virology, 447, 2013
2HEH
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BU of 2heh by Molmil
Crystal Structure of the KIF2C motor domain
分子名称: ADENOSINE-5'-DIPHOSPHATE, KIF2C protein, MAGNESIUM ION, ...
著者Wang, J, Shen, Y, Tempel, W, Landry, R, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
登録日2006-06-21
公開日2006-07-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure of the kif2c motor domain
to be published
4EJR
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Crystal structure of major capsid protein S domain from rabbit hemorrhagic disease virus
分子名称: Major capsid protein VP60
著者Xu, F, Ma, J, Zhang, K, Wang, X, Sun, F.
登録日2012-04-07
公開日2013-01-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Atomic model of rabbit hemorrhagic disease virus by cryo-electron microscopy and crystallography.
Plos Pathog., 9, 2013
4INL
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Crystal structure of SplD protease from Staphylococcus aureus at 2.1 A resolution
分子名称: Serine protease SplD
著者Cichon, P, Zdzalik, M, Kalinska, M, Wysocka, M, Stec-Niemczyk, J, Stennicke, H.R, Jabaiah, A, Markiewicz, M, Wladyka, B, Daugherty, P.S, Lesner, A, Rolka, K, Dubin, A, Potempa, J, Dubin, G.
登録日2013-01-04
公開日2013-10-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Biochemical and Structural Characterization of SplD Protease from Staphylococcus aureus.
Plos One, 8, 2013
4E40
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The haptoglobin-hemoglobin receptor of Trypanosoma congolense
分子名称: Putative uncharacterized protein
著者Higgins, M.K, Tkachenko, O, Brown, A, Reed, J, Carrington, M.
登録日2012-03-11
公開日2013-01-16
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of the trypanosome haptoglobin-hemoglobin receptor and implications for nutrient uptake and innate immunity.
Proc.Natl.Acad.Sci.USA, 110, 2013
8AJZ
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Serial femtosecond crystallography structure of CO bound ba3- type cytochrome c oxidase at 2 milliseconds after irradiation by a 532 nm laser
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CARBON MONOXIDE, COPPER (II) ION, ...
著者Safari, C, Ghosh, S, Andersson, R, Johannesson, J, Donoso, A.V, Bath, P, Bosman, R, Dahl, P, Nango, E, Tanaka, R, Zoric, D, Svensson, E, Nakane, T, Iwata, S, Neutze, R, Branden, G.
登録日2022-07-29
公開日2023-08-16
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Time-resolved serial crystallography to track the dynamics of carbon monoxide in the active site of cytochrome c oxidase.
Sci Adv, 9, 2023
5Y1Z
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Crystal structure of ZMYND8 PHD-BROMO-PWWP tandem in complex with Drebrin ADF-H domain
分子名称: Drebrin, GLYCEROL, Protein kinase C-binding protein 1, ...
著者Yao, N, Li, J, Liu, H, Wan, J, Liu, W, Zhang, M.
登録日2017-07-22
公開日2017-10-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.676 Å)
主引用文献The Structure of the ZMYND8/Drebrin Complex Suggests a Cytoplasmic Sequestering Mechanism of ZMYND8 by Drebrin
Structure, 25, 2017
8AFM
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Cryo-EM structure of crescentin filaments (wildtype, C2 symmetry and small box)
分子名称: Crescentin, Crescentin-specific megabody MB13
著者Liu, Y, Lowe, J.
登録日2022-07-18
公開日2023-08-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Filament structure and subcellular organization of the bacterial intermediate filament-like protein crescentin.
Proc.Natl.Acad.Sci.USA, 121, 2024
6PC5
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E. coli 50S ribosome bound to compounds 46 and VS1
分子名称: (2R)-2-[(3S,4R,5E,10E,12E,14S,16R,26aR)-16-fluoro-14-hydroxy-4,12-dimethyl-1,7,22-trioxo-4,7,8,9,14,15,16,17,24,25,26,26a-dodecahydro-1H,3H,22H-21,18-(azeno)pyrrolo[2,1-c][1,8,4,19]dioxadiazacyclotetracosin-3-yl]propyl isoquinolin-3-ylcarbamate, 23S ribosomal RNA, 50S ribosomal protein L13, ...
著者Pellegrino, J, Lee, D.J, Fraser, J.S, Seiple, I.B.
登録日2019-06-16
公開日2020-06-17
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Synthetic group A streptogramin antibiotics that overcome Vat resistance.
Nature, 586, 2020
3DKG
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BU of 3dkg by Molmil
Structure of Mutant(Y1248L) MET receptor tyrosine kinase in complex with inhibitor SGX-523
分子名称: 6-{[6-(1-methyl-1H-pyrazol-4-yl)[1,2,4]triazolo[4,3-b]pyridazin-3-yl]sulfanyl}quinoline, CHLORIDE ION, Hepatocyte growth factor receptor
著者Hendle, J.
登録日2008-06-24
公開日2009-07-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献SGX523 is an exquisitely selective, ATP-competitive inhibitor of the MET receptor tyrosine kinase with antitumor activity in vivo.
Mol.Cancer Ther., 8, 2009
5UCZ
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BU of 5ucz by Molmil
Class II fructose-1,6-bisphosphate aldolase E149A variant of Helicobacter pylori with DHAP
分子名称: 1,3-DIHYDROXYACETONEPHOSPHATE, Fructose-bisphosphate aldolase, SODIUM ION, ...
著者Jacques, B, Sygusch, J.
登録日2016-12-23
公開日2018-04-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Active site remodeling during the catalytic cycle in metal-dependent fructose-1,6-bisphosphate aldolases.
J. Biol. Chem., 293, 2018
8AFL
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BU of 8afl by Molmil
Cryo-EM structure of crescentin filaments (wildtype, C1 symmetry and small box)
分子名称: Crescentin, Crescentin-specific megabody MB13
著者Liu, Y, Lowe, J.
登録日2022-07-18
公開日2023-08-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Filament structure and subcellular organization of the bacterial intermediate filament-like protein crescentin.
Proc.Natl.Acad.Sci.USA, 121, 2024
8AGY
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BU of 8agy by Molmil
The Corramycin phosphotransferase in complex with Corramycin
分子名称: ABCD, Corramycin phosphotransferase, GLYCEROL
著者Adam, S, Mueller, R, Koehnke, J.
登録日2022-07-20
公開日2023-08-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The Corramycin phosphotransferase in complex with Corramycin
To Be Published
2OWL
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BU of 2owl by Molmil
Crystal structure of E. coli RdgC
分子名称: CALCIUM ION, Recombination-associated protein rdgC
著者Briggs, G.S, McEwan, P.A, Yu, J, Moore, T, Emsley, J, Lloyd, R.G.
登録日2007-02-16
公開日2007-03-20
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Ring Structure of the Escherichia coli DNA-binding Protein RdgC Associated with Recombination and Replication Fork Repair.
J.Biol.Chem., 282, 2007
7TYJ
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BU of 7tyj by Molmil
Cryo-EM Structure of insulin receptor-related receptor (IRR) in apo-state captured at pH 7. The 3D refinement was focused on one of two halves with C1 symmetry applied
分子名称: Insulin receptor-related protein
著者Wang, L.W, Hall, C, Li, J, Choi, E, Bai, X.C.
登録日2022-02-13
公開日2023-02-15
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis of the alkaline pH-dependent activation of insulin receptor-related receptor.
Nat.Struct.Mol.Biol., 30, 2023
2OYC
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Crystal structure of human pyridoxal phosphate phosphatase
分子名称: Pyridoxal phosphate phosphatase, SODIUM ION, TUNGSTATE(VI)ION
著者Ramagopal, U.A, Freeman, J, Izuka, M, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-02-21
公開日2007-03-13
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structural genomics of protein phosphatases.
J.Struct.Funct.Genom., 8, 2007
3ZPA
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INFLUENZA VIRUS (VN1194) H5 I155F mutant HA
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, HEMAGGLUTININ
著者Liu, J, Chen, Z, Stevens, D.J, Gamblin, S.J, Skehel, J.J.
登録日2013-02-27
公開日2013-10-02
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Changes in the Hemagglutinin of H5N1 Viruses During Human Infection - Influence on Receptor Binding.
Virology, 447, 2013
7TYK
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BU of 7tyk by Molmil
Cryo-EM Structure of insulin receptor-related receptor (IRR) in apo-state captured at pH 7. The 3D refinement was applied with C2 symmetry
分子名称: Insulin receptor-related protein
著者Wang, L.W, Hall, C, Li, J, Choi, E, Bai, X.C.
登録日2022-02-13
公開日2023-02-15
最終更新日2023-05-31
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural basis of the alkaline pH-dependent activation of insulin receptor-related receptor.
Nat.Struct.Mol.Biol., 30, 2023
3DSM
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BU of 3dsm by Molmil
Crystal structure of the surface layer protein BACUNI_02894 from Bacteroides uniformis, Northeast Structural Genomics Consortium Target BtR193D.
分子名称: CHLORIDE ION, uncharacterized protein BACUNI_02894
著者Forouhar, F, Lew, S, Seetharaman, J, Mao, L, Janjua, H, Xiao, R, Foote, E.L, Ciccosanti, C, Maglaqui, M, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2008-07-13
公開日2008-09-09
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the surface layer protein BACUNI_02894 from Bacteroides uniformis, Northeast Structural Genomics Consortium Target BtR193D.
To be Published
7U08
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BU of 7u08 by Molmil
Structure of CD148 fibronectin type III domain 1 and 2
分子名称: PLATINUM (II) ION, Receptor-type tyrosine-protein phosphatase eta
著者Zhou, D, Zhu, J.
登録日2022-02-17
公開日2023-02-22
実験手法X-RAY DIFFRACTION (3.30691743 Å)
主引用文献Structure of CD148 fibronectin type III domain 1 and 2
To Be Published
7TYM
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Cryo-EM Structure of insulin receptor-related receptor (IRR) in active-state captured at pH 9. The 3D refinement was applied with C2 symmetry
分子名称: Insulin receptor-related protein
著者Wang, L.W, Hall, C, Li, J, Choi, E, Bai, X.C.
登録日2022-02-13
公開日2023-02-15
最終更新日2023-05-31
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis of the alkaline pH-dependent activation of insulin receptor-related receptor.
Nat.Struct.Mol.Biol., 30, 2023
6P3E
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BU of 6p3e by Molmil
Mobile loops and electrostatic interactions maintain the flexible lambda tail tube
分子名称: Tail tube protein
著者Campbell, P, Duda, R.L, Nassur, J, Hendrix, R.W, Conway, J.F, Huet, A.
登録日2019-05-23
公開日2019-11-27
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (5.4 Å)
主引用文献Mobile Loops and Electrostatic Interactions Maintain the Flexible Tail Tube of Bacteriophage Lambda.
J.Mol.Biol., 432, 2020
1A8K
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CRYSTALLOGRAPHIC ANALYSIS OF HUMAN IMMUNODEFICIENCY VIRUS 1 PROTEASE WITH AN ANALOG OF THE CONSERVED CA-P2 SUBSTRATE: INTERACTIONS WITH FREQUENTLY OCCURRING GLUTAMIC ACID RESIDUE AT P2' POSITION OF SUBSTRATES
分子名称: HIV PROTEASE, N-[(2R)-2-({N~5~-[amino(iminio)methyl]-L-ornithyl-L-valyl}amino)-4-methylpentyl]-L-phenylalanyl-L-alpha-glutamyl-L-alanyl-L-norleucinamide
著者Weber, I.T, Wu, J, Adomat, J, Harrison, R.W, Kimmel, A.R, Wondrak, E.M, Louis, J.M.
登録日1998-03-27
公開日1999-01-13
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic analysis of human immunodeficiency virus 1 protease with an analog of the conserved CA-p2 substrate -- interactions with frequently occurring glutamic acid residue at P2' position of substrates.
Eur.J.Biochem., 249, 1997
7U01
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Structure of CD148 fibronectin type III domain 2
分子名称: Receptor-type tyrosine-protein phosphatase eta
著者Zhou, D, Zhu, J.
登録日2022-02-17
公開日2023-02-22
実験手法X-RAY DIFFRACTION (2.297079 Å)
主引用文献Structure of CD148 fibronectin type III domain 1 and 2
To Be Published

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件を2024-10-16に公開中

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