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PDB: 42550 件

4BGP
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Crystal structure of La Crosse virus nucleoprotein
分子名称: GLYCEROL, NUCLEOPROTEIN, SULFATE ION
著者Reguera, J, Malet, H, Weber, F, Cusack, S.
登録日2013-03-28
公開日2013-04-24
最終更新日2013-05-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Basis for Encapsidation of Genomic RNA by La Crosse Orthobunyavirus Nucleoprotein
Proc.Natl.Acad.Sci.USA, 110, 2013
4B0R
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Structure of the Deamidase-Depupylase Dop of the Prokaryotic Ubiquitin-like Modification Pathway
分子名称: DEAMIDASE-DEPUPYLASE DOP
著者Ozcelik, D, Barandun, J, Schmitz, N, Sutter, M, Guth, E, Damberger, F.F, Allain, F.H.-T, Ban, N, Weber-Ban, E.
登録日2012-07-04
公開日2012-09-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of Pup ligase PafA and depupylase Dop from the prokaryotic ubiquitin-like modification pathway.
Nat Commun, 3, 2012
4B0T
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Structure of the Pup Ligase PafA of the Prokaryotic Ubiquitin-like Modification Pathway in Complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PUP--PROTEIN LIGASE
著者Ozcelik, D, Barandun, J, Schmitz, N, Sutter, M, Guth, E, Damberger, F.F, Allain, F.H.-T, Ban, N, Weber-Ban, E.
登録日2012-07-04
公開日2012-09-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.159 Å)
主引用文献Structures of Pup Ligase Pafa and Depupylase Dop from the Prokaryotic Ubiquitin-Like Modification Pathway.
Nat.Commun., 3, 2012
4B5H
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Substate bound inactive mutant of Neisseria AP endonuclease in presence of metal ions
分子名称: 5'-D(*CP*GP*AP*TP*GP*GP*GP*TP*AP*GP*CP)-3', 5'-D(*GP*CP*TP*AP*CP*3DRP*CP*AP*TP*CP*GP)-3', MANGANESE (II) ION, ...
著者Lu, D, Silhan, J, MacDonald, J.T, Carpenter, E.P, Jensen, K, Tang, C.M, Baldwin, G.S, Freemont, P.S.
登録日2012-08-03
公開日2012-10-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structural basis for the recognition and cleavage of abasic DNA in Neisseria meningitidis.
Proc. Natl. Acad. Sci. U.S.A., 109, 2012
4B5M
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Neisseria AP endonuclease bound to the substrate with a cytosine orphan base
分子名称: 5'-D(*3DRP*CP*AP*TP*CP*GP)-3', 5'-D(*CP*GP*AP*TP*GP*CP*GP*TP*AP*GP*CP)-3', 5'-D(*GP*CP*TP*AP*CP)-3', ...
著者Lu, D, Silhan, J, MacDonald, J.T, Carpenter, E.P, Jensen, K, Tang, C.M, Baldwin, G.S, Freemont, P.S.
登録日2012-08-06
公開日2012-10-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.758 Å)
主引用文献Structural basis for the recognition and cleavage of abasic DNA in Neisseria meningitidis.
Proc. Natl. Acad. Sci. U.S.A., 109, 2012
4BIJ
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Threading model of T7 large terminase
分子名称: DNA MATURASE B
著者Dauden, M.I, Martin-Benito, J, Sanchez-Ferrero, J.C, Pulido-Cid, M, Valpuesta, J.M, Carrascosa, J.L.
登録日2013-04-10
公開日2013-05-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (16 Å)
主引用文献Large Terminase Conformational Change Induced by Connector Binding in Bacteriophage T7
J.Biol.Chem., 288, 2013
4BEV
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ATPase crystal structure with bound phosphate analogue
分子名称: COPPER EFFLUX ATPASE, MAGNESIUM ION, TRIFLUOROMAGNESATE
著者Mattle, D, Drachmann, N.D, Liu, X.Y, Gourdon, P, Pedersen, B.P, Morth, P, Wang, J, Nissen, P.
登録日2013-03-12
公開日2014-04-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.583 Å)
主引用文献ATPase Crystal Structure with Bound Phosphate Analogue
To be Published
4BEC
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MUTANT (K220A) OF THE HSDR SUBUNIT OF THE ECOR124I RESTRICTION ENZYME IN COMPLEX WITH ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, TYPE I RESTRICTION ENZYME HSDR
著者Csefalvay, E, Lapkouski, M, Guzanova, A, Csefalvay, L, Baikova, T, Shevelev, I, Janscak, P, Smatanova, I.K, Panjikar, S, Carey, J, Weiserova, M, Ettrich, R.
登録日2013-03-07
公開日2014-03-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Functional Coupling of Duplex Translocation to DNA Cleavage in a Type I Restriction Enzyme.
Plos One, 10, 2015
1USQ
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Complex of E. Coli DraE adhesin with Chloramphenicol
分子名称: 1,2-ETHANEDIOL, CHLORAMPHENICOL, DR HEMAGGLUTININ STRUCTURAL SUBUNIT, ...
著者Anderson, K.L, Billington, J, Pettigrew, D, Cota, E, Roversi, P, Simpson, P, Chen, H.A, Urvil, P, Dumerle, L, Barlow, P, Medof, E, Smith, R.A.G, Nowicki, B, Le Bouguenec, C, Lea, S.M, Matthews, S.
登録日2003-11-27
公開日2004-08-31
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献High Resolution Studies of the Afa/Dr Adhesin Drae and its Interaction with Chloramphenicol
J.Biol.Chem., 279, 2004
4NQV
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Crystal Structure of HLA A*0101 in complex with NP44, an 9-mer influenza epitope
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-1 alpha chain, ...
著者Rossjohn, J, Gras, S.
登録日2013-11-25
公開日2013-12-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Preexisting CD8+ T-cell immunity to the H7N9 influenza A virus varies across ethnicities.
Proc.Natl.Acad.Sci.USA, 111, 2014
4BE7
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MUTANT (K220R) OF THE HSDR SUBUNIT OF THE ECOR124I RESTRICTION ENZYME IN COMPLEX WITH ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Csefalvay, E, Lapkouski, M, Guzanova, A, Csefalvay, L, Baikova, T, Shevelev, I, Janscak, P, Smatanova, I.K, Panjikar, S, Carey, J, Weiserova, M, Ettrich, R.
登録日2013-03-06
公開日2014-03-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.744 Å)
主引用文献Functional Coupling of Duplex Translocation to DNA Cleavage in a Type I Restriction Enzyme.
Plos One, 10, 2015
1UN2
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Crystal structure of circularly permuted CPDSBA_Q100T99: Preserved Global Fold and Local Structural Adjustments
分子名称: THIOL-DISULFIDE INTERCHANGE PROTEIN
著者Manjasetty, B.A, Hennecke, J, Glockshuber, R, Heinemann, U.
登録日2003-09-03
公開日2003-09-26
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of Circularly Permuted Dsba(Q100T99): Preserved Global Fold and Local Structural Adjustments
Acta Crystallogr.,Sect.D, 60, 2004
1UT1
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DraE adhesin from Escherichia Coli
分子名称: 1,2-ETHANEDIOL, DR HEMAGGLUTININ STRUCTURAL SUBUNIT, SULFATE ION
著者Anderson, K.L, Billington, J, Pettigrew, D, Cota, E, Roversi, P, Simpson, P, Chen, H.A, Urvil, P, Dumerle, L, Barlow, P, Medof, E, Smith, R.A.G, Nowicki, B, Le Bouguenec, C, Lea, S.M, Matthews, S.
登録日2003-12-02
公開日2004-08-31
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献High Resolution Studies of the Afa/Dr Adhesin Drae and its Interaction with Chloramphenicol
J.Biol.Chem., 279, 2004
1QOZ
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Catalytic core domain of acetyl xylan esterase from Trichoderma reesei
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYL XYLAN ESTERASE
著者Hakulinen, N, Rouvinen, J.
登録日1999-11-25
公開日2000-11-24
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Three-Dimensional Structure of the Catalytic Core of Acetylxylan Esterase from Trichoderma Reesei: Insights Into the Deacetylation Mechanism
J.Struct.Biol., 132, 2000
4NX1
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Crystal structure of a trap periplasmic solute binding protein from Sulfitobacter sp. nas-14.1, target EFI-510292, with bound alpha-D-taluronate
分子名称: C4-dicarboxylate transport system substrate-binding protein, alpha-D-talopyranuronic acid
著者Vetting, M.W, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Stead, M, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2013-12-08
公開日2014-01-22
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015
4O45
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WDR5 in complex with influenza NS1 C-terminal tail
分子名称: Nonstructural protein 1, UNKNOWN ATOM OR ION, WD repeat-containing protein 5
著者Qin, S, Xu, C, Tempel, W, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2013-12-18
公開日2014-04-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Structural basis for histone mimicry and hijacking of host proteins by influenza virus protein NS1.
Nat Commun, 5, 2014
4O2W
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Crystal structure of the third RCC1-like domain of HERC1
分子名称: CHLORIDE ION, E3 ubiquitin-protein ligase HERC1, MAGNESIUM ION, ...
著者Dong, A, Hu, J, Li, Y, Walker, J.R, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Tong, Y, Structural Genomics Consortium (SGC)
登録日2013-12-17
公開日2014-01-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the third RCC1-like domain of HERC1
To be Published
4O34
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Room temperature macromolecular serial crystallography using synchrotron radiation
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Stellato, F, Oberthuer, D, Liang, M, Bean, R, Gati, C, Yefanov, O, Barty, A, Burkhardt, A, Fischer, P, Galli, L, Kirian, R.A, Mayer, J, Pannerselvam, S, Yoon, C.H, Chervinskii, F, Speller, E, White, T.A, Betzel, C, Meents, A, Chapman, H.N.
登録日2013-12-18
公開日2014-06-11
最終更新日2019-07-17
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Room-temperature macromolecular serial crystallography using synchrotron radiation.
IUCrJ, 1, 2014
4O46
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14-3-3-gamma in complex with influenza NS1 C-terminal tail phosphorylated at S228
分子名称: 14-3-3 protein gamma, Nonstructural protein 1, UNKNOWN ATOM OR ION, ...
著者Qin, S, Liu, Y, Tempel, W, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2013-12-18
公開日2014-04-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis for histone mimicry and hijacking of host proteins by influenza virus protein NS1.
Nat Commun, 5, 2014
4O42
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Tandem chromodomains of human CHD1 in complex with influenza NS1 C-terminal tail dimethylated at K229
分子名称: Chromodomain-helicase-DNA-binding protein 1, GLYCEROL, Nonstructural protein 1, ...
著者Qin, S, Xu, C, Tempel, W, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2013-12-18
公開日2014-04-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Structural basis for histone mimicry and hijacking of host proteins by influenza virus protein NS1.
Nat Commun, 5, 2014
1UT2
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AfaE-3 adhesin from Escherichia Coli
分子名称: AFIMBRIAL ADHESIN AFA-III, SULFATE ION
著者Anderson, K.L, Billington, J, Pettigrew, D, Cota, E, Roversi, P, Simpson, P, Chen, H.A, Urvil, P, Dumerle, L, Barlow, P, Medof, E, Smith, R.A.G, Nowicki, B, Le Bouguenec, C, Lea, S.M, Matthews, S.
登録日2003-12-02
公開日2004-08-31
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献High Resolution Studies of the Afa/Dr Adhesin Drae and its Interaction with Chloramphenicol
J.Biol.Chem., 279, 2004
4O94
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Crystal structure of a trap periplasmic solute binding protein from Rhodopseudomonas palustris HaA2 (RPB_3329), Target EFI-510223, with bound succinate
分子名称: CHLORIDE ION, SUCCINIC ACID, TRAP dicarboxylate transporter DctP subunit
著者Vetting, M.W, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Stead, M, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2014-01-01
公開日2014-01-22
最終更新日2015-02-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015
4O7S
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SAICAR synthetase (Type-2) in complex with TMP/TDP
分子名称: ACETATE ION, PHOSPHATE ION, Phosphoribosylaminoimidazole-succinocarboxamide synthase, ...
著者Manjunath, K, Jeyakanthan, J, Sekar, K.
登録日2013-12-26
公開日2014-12-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献SAICAR synthetase (Type-2) in complex with TMP/TDP
To be Published
4O86
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SAICAR synthetase (Type-2) in complex with ADP and CDP
分子名称: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, CYTIDINE-5'-DIPHOSPHATE, ...
著者Manjunath, K, Jeyakanthan, J, Sekar, K.
登録日2013-12-26
公開日2014-12-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献SAICAR synthetase (Type-2) in complex with ADP and CDP
To be Published
4OMO
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Crystal structure of the c-Src tyrosine kinase SH3 domain mutant Q128E
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, NICKEL (II) ION, Proto-oncogene tyrosine-protein kinase Src
著者Camara-Artigas, A, Bacarizo, J.
登録日2014-01-27
公開日2014-12-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.04 Å)
主引用文献Electrostatic Effects in the Folding of the SH3 Domain of the c-Src Tyrosine Kinase: pH-Dependence in 3D-Domain Swapping and Amyloid Formation.
Plos One, 9, 2014

224004

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