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PDB: 42507 results

8OGS
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BU of 8ogs by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B08
Descriptor: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, ethyl 1,3-dihydro-2H-pyrrolo[3,4-c]pyridine-2-carboxylate
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B08
To Be Published
5D4O
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BU of 5d4o by Molmil
Structure of CPII, a nitrogen regulatory PII-like protein from Thiomonas intermedia K12, bound to ADP, AMP and bicarbonate.
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, BICARBONATE ION, ...
Authors:Wheatley, N.M, Ngo, J, Cascio, D, Sawaya, M.R, Yeates, T.O.
Deposit date:2015-08-08
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A PII-Like Protein Regulated by Bicarbonate: Structural and Biochemical Studies of the Carboxysome-Associated CPII Protein.
J.Mol.Biol., 428, 2016
8OHG
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BU of 8ohg by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry F09
Descriptor: 4-pyridin-2-ylphenol, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-21
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry F09
To Be Published
8OHE
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BU of 8ohe by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry F03
Descriptor: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, N-(3-fluorophenyl)-2-(2-methoxyethoxy)acetamide
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-21
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry F03
To Be Published
5D5Y
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BU of 5d5y by Molmil
Structure of Chaetomium thermophilum Skn7 coiled-coil domain, crystal form I
Descriptor: Putative transcription factor
Authors:Neudegger, T, Verghese, J, Hayer-Hartl, M, Hartl, F.U, Bracher, A.
Deposit date:2015-08-11
Release date:2015-12-30
Last modified:2016-02-10
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Structure of human heat-shock transcription factor 1 in complex with DNA.
Nat.Struct.Mol.Biol., 23, 2016
8OHK
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BU of 8ohk by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry H01
Descriptor: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, ~{N},~{N}-diethyl-2-(4-nitrophenoxy)ethanamine
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-21
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry H01
To Be Published
5IQ0
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BU of 5iq0 by Molmil
Crystal structure of Esterase mutant - F72G
Descriptor: Esterase
Authors:Seok, S.-H, Seo, M.-D, Kim, J, Ryu, Y.
Deposit date:2016-03-10
Release date:2017-03-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Crystal structure of Esterase mutant - F72G
To Be Published
1H7C
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BU of 1h7c by Molmil
human tubulin chaperone cofactor a
Descriptor: ACETIC ACID, SULFATE ION, TUBULIN-SPECIFIC CHAPERONE A
Authors:Guasch, A, Aloria, K, Perez, R, Campo, R, Avila, J, Zabala, J.C, Coll, M.
Deposit date:2001-07-04
Release date:2002-06-13
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Three-Dimensional Structure of Human Tubulin Chaperone Cofactor A
J.Mol.Biol., 318, 2002
3C6F
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BU of 3c6f by Molmil
Crystal structure of protein Bsu07140 from Bacillus subtilis
Descriptor: GLYCEROL, YetF protein
Authors:Patskovsky, Y, Min, T, Zhang, A, Adams, J, Groshong, C, Wasserman, S.R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-02-04
Release date:2008-02-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of protein Bsu07140 from Bacillus subtilis.
To be Published
3C19
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BU of 3c19 by Molmil
Crystal structure of protein MK0293 from Methanopyrus kandleri AV19
Descriptor: GLYCEROL, PHOSPHATE ION, Uncharacterized protein MK0293
Authors:Patskovsky, Y, Romero, R, Bonanno, J.B, Malashkevich, V, Dickey, M, Chang, S, Koss, J, Bain, K, Wasserman, S.R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-01-22
Release date:2008-02-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of protein MK0293 from Methanopyrus kandleri AV19.
To be Published
5DGF
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BU of 5dgf by Molmil
Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
Authors:Melnikov, S, Mailliot, J, Shin, B.-S, Rigger, L, Yusupova, G, Micura, R, Dever, T.E, Yusupov, M.
Deposit date:2015-08-27
Release date:2016-12-14
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome
To Be Published
8AKJ
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BU of 8akj by Molmil
Acyl-enzyme complex of cephalothin bound to deacylation mutant KPC-2 (E166Q)
Descriptor: 5-METHYLENE-2-[2-OXO-1-(2-THIOPHEN-2-YL-ACETYLAMINO)-ETHYL]-5,6-DIHYDRO-2H-[1,3]THIAZINE-4-CARBOXYLIC ACID, Carbapenem-hydrolyzing beta-lactamase KPC, GLYCEROL, ...
Authors:Tooke, C.L, Hinchliffe, P, Spencer, J.
Deposit date:2022-07-29
Release date:2023-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Tautomer-Specific Deacylation and Omega-Loop Flexibility Explain the Carbapenem-Hydrolyzing Broad-Spectrum Activity of the KPC-2 beta-Lactamase.
J.Am.Chem.Soc., 145, 2023
8OI2
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BU of 8oi2 by Molmil
Crystal structure of Alb1 megabody in complex with human serum albumin
Descriptor: Alb1 Megabody, Albumin
Authors:De Felice, S, Zoia, G, Romanyuk, Z, Pardon, E, Steyaert, J, Angelini, A, Cendron, L.
Deposit date:2023-03-22
Release date:2024-04-03
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structure of human serum albumin in complex with megabody reveals unique human and murine cross-reactive binding site.
Protein Sci., 33, 2024
1H91
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BU of 1h91 by Molmil
The crystal structure of lobster apocrustacyanin A1 using softer X-rays.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CRUSTACYANIN A1 SUBUNIT
Authors:Cianci, M, Rizkallah, P.J, Olczak, A, Raftery, J, Chayen, N.E, Zagalsky, P.F, Helliwell, J.R.
Deposit date:2001-02-21
Release date:2001-09-06
Last modified:2019-05-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of Lobster Apocrustacyanin A1 Using Softer X-Rays
Acta Crystallogr.,Sect.D, 57, 2001
5I50
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BU of 5i50 by Molmil
Structure of OmoMYC bound to double-stranded DNA
Descriptor: DNA (5'-D(P*CP*AP*CP*CP*CP*GP*GP*TP*CP*AP*CP*GP*TP*GP*GP*CP*CP*TP*AP*CP*AP*C)-3'), DNA (5'-D(P*GP*TP*GP*TP*AP*GP*GP*CP*CP*AP*CP*GP*TP*GP*AP*CP*CP*GP*GP*GP*TP*G)-3'), Myc proto-oncogene protein
Authors:Koelmel, W, Jung, L.A, Kuper, J, Eilers, M, Kisker, C.
Deposit date:2016-02-13
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:OmoMYC blunts promoter invasion by oncogenic MYC to inhibit gene expression characteristic of MYC-dependent tumors.
Oncogene, 36, 2017
5CQ5
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BU of 5cq5 by Molmil
Crystal structure of the bromodomain of bromodomain adjacent to zinc finger domain protein 2B (BAZ2B) in complex with 2,3-Ethylenedioxybenzoic Acid (SGC - Diamond I04-1 fragment screening)
Descriptor: 1,2-ETHANEDIOL, 2,3-dihydro-1,4-benzodioxine-5-carboxylic acid, Bromodomain adjacent to zinc finger domain protein 2B
Authors:Bradley, A, Pearce, N, Krojer, T, Ng, J, Talon, R, Vollmar, M, Jose, B, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2015-07-21
Release date:2015-09-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.961 Å)
Cite:Crystal structure of the second bromodomain of bromodomain adjancent to zinc finger domain protein 2B (BAZ2B) in complex with 2,3-Ethylenedioxybenzoic Acid (SGC - Diamond I04-1 fragment screening)
To be published
5IRI
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BU of 5iri by Molmil
Structure of the mouse SAD-B AIS-KA1 fragment
Descriptor: Serine/threonine-protein kinase BRSK1
Authors:Ma, H, Wu, J.X, Wang, J, Wu, J.W.
Deposit date:2016-03-13
Release date:2016-06-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and inhibition analysis of the mouse SAD-B C-terminal fragment
Biosci.Biotechnol.Biochem., 2016
7LUL
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BU of 7lul by Molmil
Structure of the MM2 Erbin PDZ variant in complex with a high-affinity peptide
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Singer, A.U, Teyra, J, McLaughlin, M, Ernst, A, Sicheri, F, Sidhu, S.S.
Deposit date:2021-02-22
Release date:2021-07-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Comprehensive Assessment of the Relationship Between Site -2 Specificity and Helix alpha 2 in the Erbin PDZ Domain.
J.Mol.Biol., 433, 2021
8JTV
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BU of 8jtv by Molmil
hOCT1 in complex with metformin in inward occluded conformation
Descriptor: Metformin, Solute carrier family 22 member 1
Authors:Zhang, S, Zhu, A, Kong, F, Chen, J, Lan, B, He, G, Gao, K, Cheng, L, Yan, C, Chen, L, Liu, X.
Deposit date:2023-06-22
Release date:2024-03-27
Method:ELECTRON MICROSCOPY (3.77 Å)
Cite:Structural insights into human organic cation transporter 1 transport and inhibition.
Cell Discov, 10, 2024
5D78
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BU of 5d78 by Molmil
Structure of RRM3 Domain of Mip6 at 1.25 A Resolution
Descriptor: BETA-MERCAPTOETHANOL, RNA-binding protein MIP6, SULFATE ION
Authors:Mohamad, N, Bravo, J.
Deposit date:2015-08-13
Release date:2016-08-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.251 Å)
Cite:Structure of RRM3 Domain of Mip6 at 1.25 A Resolution
To Be Published
8OGU
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BU of 8ogu by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry C07
Descriptor: 3,4-dihydro-1~{H}-quinolin-2-one, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry C07
To Be Published
3C97
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BU of 3c97 by Molmil
Crystal structure of the response regulator receiver domain of a signal transduction histidine kinase from Aspergillus oryzae
Descriptor: Signal transduction histidine kinase
Authors:Bonanno, J.B, Freeman, J, Bain, K.T, Chang, S, Romero, R, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-02-15
Release date:2008-03-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the response regulator receiver domain of a signal transduction histidine kinase from Aspergillus oryzae.
To be Published
5I1W
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BU of 5i1w by Molmil
Crystal structure of CrmK, a flavoenzyme involved in the shunt product recycling mechanism in caerulomycin biosynthesis
Descriptor: 4-hydroxy[2,2'-bipyridine]-6-carbaldehyde, 6-(hydroxymethyl)[2,2'-bipyridin]-4-ol, CrmK, ...
Authors:Picard, M.-E, Barma, J, Shi, R.
Deposit date:2016-02-07
Release date:2017-02-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Biochemical and structural insights into flavoenzyme CrmK reveals a shunt product recycling mechanism in caerulomycin biosynthesis
to be published
8OGT
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BU of 8ogt by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry C04
Descriptor: 2-hydrazinyl-4-methoxypyrimidine, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry C04
To Be Published
7LX0
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BU of 7lx0 by Molmil
Quantitative assessment of chlorophyll types in cryo-EM maps of photosystem I acclimated to far-red light
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Gisriel, C.J, Wang, J.
Deposit date:2021-03-02
Release date:2021-07-28
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Quantitative assessment of chlorophyll types in cryo-EM maps of photosystem I acclimated to far-red light
BBA Adv, 1, 2021

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PDB entries from 2024-08-14

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