Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42836 results

8TGH
DownloadVisualize
BU of 8tgh by Molmil
VMAT1 dimer with amphetamine and reserpine
Descriptor: (2S)-1-phenylpropan-2-amine, Chromaffin granule amine transporter, reserpine
Authors:Ye, J, Liu, B, Li, W.
Deposit date:2023-07-12
Release date:2024-03-20
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural insights into vesicular monoamine storage and drug interactions.
Nature, 629, 2024
8TGL
DownloadVisualize
BU of 8tgl by Molmil
VMAT1 dimer with norepinephrine and reserpine
Descriptor: Chromaffin granule amine transporter, L-NOREPINEPHRINE, reserpine
Authors:Ye, J, Liu, B, Li, W.
Deposit date:2023-07-12
Release date:2024-03-20
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural insights into vesicular monoamine storage and drug interactions.
Nature, 629, 2024
8TGM
DownloadVisualize
BU of 8tgm by Molmil
VMAT1 dimer with reserpine
Descriptor: VMAT1 dimer with reserpine, reserpine
Authors:Ye, J, Liu, B, Li, W.
Deposit date:2023-07-12
Release date:2024-03-20
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural insights into vesicular monoamine storage and drug interactions.
Nature, 629, 2024
8TOB
DownloadVisualize
BU of 8tob by Molmil
Acinetobacter GP16 Type IV pilus
Descriptor: Fimbrial protein
Authors:Meng, R, Xing, Z, Zhang, J.
Deposit date:2023-08-03
Release date:2024-03-06
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Structural basis of Acinetobacter type IV pili targeting by an RNA virus.
Nat Commun, 15, 2024
8TGI
DownloadVisualize
BU of 8tgi by Molmil
VMAT1 dimer with dopamine and reserpine
Descriptor: Chromaffin granule amine transporter, L-DOPAMINE, reserpine
Authors:Ye, J, Liu, B, Li, W.
Deposit date:2023-07-12
Release date:2024-03-20
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural insights into vesicular monoamine storage and drug interactions.
Nature, 629, 2024
8TGJ
DownloadVisualize
BU of 8tgj by Molmil
VMAT1 dimer in unbound form and with reserpine
Descriptor: VMAT1 dimer in unbound form and with reserpine, reserpine
Authors:Ye, J, Liu, B, Li, W.
Deposit date:2023-07-12
Release date:2024-03-20
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural insights into vesicular monoamine storage and drug interactions.
Nature, 629, 2024
8TGK
DownloadVisualize
BU of 8tgk by Molmil
VMAT1 dimer with histamine and reserpine
Descriptor: Chromaffin granule amine transporter, HISTAMINE, reserpine
Authors:Ye, J, Liu, B, Li, W.
Deposit date:2023-07-12
Release date:2024-03-20
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural insights into vesicular monoamine storage and drug interactions.
Nature, 629, 2024
4WCZ
DownloadVisualize
BU of 4wcz by Molmil
Crystal structure of a putative enoyl-CoA hydratase/isomerase from Novosphingobium aromaticivorans
Descriptor: Enoyl-CoA hydratase/isomerase
Authors:Tkaczuk, K.L, Cooper, D.R, Chapman, H.C, Niedzialkowska, E, Cymborowski, M.T, Hillerich, B.S, Stead, M, Ahmed, M, Hammonds, J, Bonanno, J, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-09-05
Release date:2014-12-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structure of a putative enoyl-CoA hydratase/isomerase from Novosphingobium aromaticivorans
to be published
8TQ9
DownloadVisualize
BU of 8tq9 by Molmil
Crystal structure of Fab.S19.8 in complex with MHC-I (H2-Dd)
Descriptor: Beta-2-microglobulin, Fab.S19.8 Heavy Chain, Fab.S19.8 Light Chain, ...
Authors:Jiang, J, Boyd, L.F, Natarajan, K, Margulies, D.H.
Deposit date:2023-08-06
Release date:2024-03-20
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Experimental Structures of Antibody/MHC-I Complexes Reveal Details of Epitopes Overlooked by Computational Prediction.
J Immunol., 212, 2024
4V6O
DownloadVisualize
BU of 4v6o by Molmil
Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Agirrezabala, X, Liao, H, Schreiner, E, Fu, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J.
Deposit date:2011-12-07
Release date:2014-07-09
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (14.7 Å)
Cite:Structural characterization of mRNA-tRNA translocation intermediates.
Proc.Natl.Acad.Sci.USA, 109, 2012
8TWC
DownloadVisualize
BU of 8twc by Molmil
Acinetobacter phage AP205 T=3 VLP
Descriptor: Coat protein
Authors:Meng, R, Xing, Z, Zhang, J.
Deposit date:2023-08-20
Release date:2024-03-06
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis of Acinetobacter type IV pili targeting by an RNA virus.
Nat Commun, 15, 2024
8U8L
DownloadVisualize
BU of 8u8l by Molmil
X-ray crystal structure of TEBP-2 MCD3 with ds DNA
Descriptor: CESIUM ION, DNA (5'-D(*CP*TP*GP*TP*TP*AP*GP*GP*CP*TP*TP*AP*GP*GP*CP*TP*TP*AP*G)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*GP*CP*CP*TP*AP*AP*GP*CP*CP*TP*AP*AP*CP*A)-3'), ...
Authors:Nandakumar, J, Padmanaban, S.
Deposit date:2023-09-18
Release date:2024-04-03
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Caenorhabditis elegans telomere-binding proteins TEBP-1 and TEBP-2 adapt the Myb module to dimerize and bind telomeric DNA.
Proc.Natl.Acad.Sci.USA, 121, 2024
8U8M
DownloadVisualize
BU of 8u8m by Molmil
X-ray crystal structure of TEBP-1 MCD2 homodimer
Descriptor: COBALT (II) ION, Double-strand telomeric DNA-binding proteins 1
Authors:Nandakumar, J, Padmanaban, S.
Deposit date:2023-09-18
Release date:2024-04-03
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Caenorhabditis elegans telomere-binding proteins TEBP-1 and TEBP-2 adapt the Myb module to dimerize and bind telomeric DNA.
Proc.Natl.Acad.Sci.USA, 121, 2024
2FQN
DownloadVisualize
BU of 2fqn by Molmil
Crystal structure of the Homo sapiens cytoplasmic ribosomal decoding A site
Descriptor: 5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3', COBALT HEXAMMINE(III), MAGNESIUM ION
Authors:Kondo, J, Urzhumtsev, A, Westhof, E.
Deposit date:2006-01-18
Release date:2006-02-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Two conformational states in the crystal structure of the Homo sapiens cytoplasmic ribosomal decoding A site.
Nucleic Acids Res., 34, 2006
2FSP
DownloadVisualize
BU of 2fsp by Molmil
NMR SOLUTION STRUCTURE OF BACILLUS SUBTILIS SPO0F PROTEIN, MINIMIZED AVERAGE STRUCTURE
Descriptor: STAGE 0 SPORULATION PROTEIN F
Authors:Feher, V.A, Skelton, N.J, Dahlquist, F.W, Cavanagh, J.
Deposit date:1997-06-06
Release date:1997-12-10
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:High-resolution NMR structure and backbone dynamics of the Bacillus subtilis response regulator, Spo0F: implications for phosphorylation and molecular recognition.
Biochemistry, 36, 1997
7XB4
DownloadVisualize
BU of 7xb4 by Molmil
Crystal structure of SARS-Cov-2 main protease D48N mutant in complex with PF07321332
Descriptor: (1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, Replicase polyprotein 1a
Authors:Hu, X.H, Li, J, Zhang, J.
Deposit date:2022-03-20
Release date:2023-03-22
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structural Basis for the Inhibition of SARS-CoV-2 M pro D48N Mutant by Shikonin and PF-07321332.
Viruses, 16, 2023
4V0B
DownloadVisualize
BU of 4v0b by Molmil
Escherichia coli FtsH hexameric N-domain
Descriptor: ATP-DEPENDENT ZINC METALLOPROTEASE FTSH, SULFATE ION
Authors:Serek-Heuberger, J, Martin, J, Lupas, A.N, Hartmann, M.D.
Deposit date:2014-09-13
Release date:2015-01-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structure and Evolution of N-Domains in Aaa Metalloproteases.
J.Mol.Biol., 427, 2015
4V06
DownloadVisualize
BU of 4v06 by Molmil
Crystal structure of human tryptophan hydroxylase 2 (TPH2), catalytic domain
Descriptor: FE (III) ION, IMIDAZOLE, TRYPTOPHAN 5-HYDROXYLASE 2
Authors:Kopec, J, Oberholzer, A, Fitzpatrick, F, Newman, J, Tallant, C, Kiyani, W, Shrestha, L, Burgess-Brown, N, von Delft, F, Arrowsmith, C, Edwards, A, Bountra, C, Yue, W.W.
Deposit date:2014-09-11
Release date:2014-10-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Crystal Structure of Human Tryptophane Hydroxylase 2 (Tph2), Catalytic Domain
To be Published
4V0Q
DownloadVisualize
BU of 4v0q by Molmil
Dengue Virus Full Length NS5 Complexed with SAH
Descriptor: ACETATE ION, GLYCEROL, NS5 POLYMERASE, ...
Authors:Zhao, Y, Soh, S, Zheng, J, Phoo, W.W, Swaminathan, K, Cornvik, T.C, Lim, S.P, Shi, P.-Y, Lescar, J, Vasudevan, S.G, Luo, D.
Deposit date:2014-09-18
Release date:2015-01-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A Crystal Structure of the Dengue Virus Ns5 Protein Reveals a Novel Inter-Domain Interface Essential for Protein Flexibility and Virus Replication.
Plos Pathog., 11, 2015
2FV7
DownloadVisualize
BU of 2fv7 by Molmil
Crystal structure of human ribokinase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ribokinase, ...
Authors:Rabeh, W.M, Tempel, W, Nedyalkova, L, Arrowsmith, C, Edwards, A, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2006-01-30
Release date:2006-02-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of human ribokinase
to be published
2FZA
DownloadVisualize
BU of 2fza by Molmil
Crystal structure of d(GCGGGAGC): the base-intercalated duplex
Descriptor: 5'-D(*GP*(CBR)P*GP*GP*GP*AP*GP*C)-3', CALCIUM ION, SODIUM ION
Authors:Kondo, J, Ciengshin, T, Juan, E.C.M, Mitomi, K, Takenaka, A.
Deposit date:2006-02-09
Release date:2007-01-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Crystal structure of d(gcGXGAgc) with X=G: a mutation at X is possible to occur in a base-intercalated duplex for multiplex formation
Nucleosides Nucleotides Nucleic Acids, 25, 2006
2FS1
DownloadVisualize
BU of 2fs1 by Molmil
solution structure of PSD-1
Descriptor: PSD-1
Authors:He, Y, Rozak, D.A, Sari, N, Chen, Y, Bryan, P, Orban, J.
Deposit date:2006-01-20
Release date:2006-12-05
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure, dynamics, and stability variation in bacterial albumin binding modules: implications for species specificity.
Biochemistry, 45, 2006
4USD
DownloadVisualize
BU of 4usd by Molmil
Human STK10 (LOK) with SB-633825
Descriptor: 4-{5-(6-methoxynaphthalen-2-yl)-1-methyl-2-[2-methyl-4-(methylsulfonyl)phenyl]-1H-imidazol-4-yl}pyridine, SERINE/THREONINE-PROTEIN KINASE 10
Authors:Elkins, J.M, Salah, E, Szklarz, M, von Delft, F, Canning, P, Raynor, J, Bountra, C, Edwards, A.M, Knapp, S.
Deposit date:2014-07-07
Release date:2015-07-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Comprehensive Characterization of the Published Kinase Inhibitor Set.
Nat.Biotechnol., 34, 2016
7XOF
DownloadVisualize
BU of 7xof by Molmil
Crystal structure of Oryza sativa plastid glycyl-tRNA synthetase
Descriptor: Glycine--tRNA ligase
Authors:Yu, Z, Lu, G, Li, J.
Deposit date:2022-05-01
Release date:2023-05-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Crystal structure of Oryza sativa plastid glycyl-tRNA synthetase
To be published
4WXB
DownloadVisualize
BU of 4wxb by Molmil
Crystal Structure of Serine Hydroxymethyltransferase from Streptococcus thermophilus
Descriptor: CACODYLATE ION, CITRIC ACID, GLYCEROL, ...
Authors:Hernandez, K, Zelen, I, Petrillo, G, Uson, I, Wandtke, C, Bujons, J, Joglar, J, Parella, T, Clapes, P.
Deposit date:2014-11-13
Release date:2015-02-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Engineered L-Serine Hydroxymethyltransferase from Streptococcus thermophilus for the Synthesis of alpha , alpha-Dialkyl-alpha-Amino Acids.
Angew.Chem.Int.Ed.Engl., 54, 2015

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon