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PDB: 45 件
8R2C
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BU of 8r2c by Molmil
Crystal structure of the Vint domain from Tetrahymena thermophila
分子名称: DI(HYDROXYETHYL)ETHER, SULFATE ION, von willebrand factor type A (VWA) domain was originally protein
著者Iwai, H, Beyer, H.M, Johannson, J.E, Li, M, Wlodawer, A.
登録日2023-11-03
公開日2024-02-28
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The three-dimensional structure of the Vint domain from Tetrahymena thermophila suggests a ligand-regulated cleavage mechanism by the HINT fold.
Febs Lett., 598, 2024
8RD6
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BU of 8rd6 by Molmil
the C-terminal domain of TonB protein from Salmonella enterica.
分子名称: Protein TonB
著者Iwai, H, Ciragan, A, Oeemig, J.S.
登録日2023-12-07
公開日2024-01-17
実験手法SOLUTION NMR
主引用文献The 100-protein NMR spectra dataset: A resource for biomolecular NMR data analysis.
Sci Data, 11, 2024
1VD0
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BU of 1vd0 by Molmil
Capsid stabilizing protein GPD, NMR, 20 Structures
分子名称: Head decoration protein
著者Iwai, H, Forrer, P, Pluckthun, A, Guntert, P, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-17
公開日2005-03-29
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献NMR solution structure of the monomeric form of the bacteriophage lambda capsid stabilizing protein gpD.
J.Biomol.Nmr, 31, 2005
1SQ8
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BU of 1sq8 by Molmil
a variant 434 repressor DNA binding domain devoid of hydroxyl groups, NMR, 20 STRUCTURES
分子名称: dh434
著者Iwai, H, Wider, G, Wuthrich, K.
登録日2004-03-18
公開日2004-07-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR Structure of a Variant 434 Repressor DNA-binding Domain Devoid of Hydroxyl Groups
J.Biomol.Nmr, 29, 2004
5OBN
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BU of 5obn by Molmil
NMR solution structure of U11/U12 65K protein's C-terminal RRM domain (381-516)
分子名称: RNA-binding protein 40
著者Norppa, A.J, Kauppala, T.M, Heikkinen, H.A, Verma, B, Iwai, H, Frilander, M.J.
登録日2017-06-28
公開日2018-01-24
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Mutations in the U11/U12-65K protein associated with isolated growth hormone deficiency lead to structural destabilization and impaired binding of U12 snRNA.
RNA, 24, 2018
7OEC
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BU of 7oec by Molmil
Crystal structure of an intein from a hyperthermophile
分子名称: DI(HYDROXYETHYL)ETHER, DNA polymerase II large subunit, SULFATE ION, ...
著者Hannes, B, Hiltunen, M, Iwai, H.
登録日2021-05-03
公開日2021-05-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Mini-Intein Structures from Extremophiles Suggest a Strategy for Finding Novel Robust Inteins.
Microorganisms, 9, 2021
7QST
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BU of 7qst by Molmil
Crystal structure of homing endonuclease-associated PhoVMA intein (C1A)
分子名称: CADMIUM ION, NICKEL (II) ION, V-type ATP synthase subunit A
著者Beyer, H.M, Iwai, H.
登録日2022-01-14
公開日2022-03-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Structural Basis for the Propagation of Homing Endonuclease-Associated Inteins.
Front Mol Biosci, 9, 2022
7QSU
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BU of 7qsu by Molmil
Crystal structure of homing endonuclease-associated TliVMA intein (C1A, d333-339)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, V-ATPase
著者Beyer, H.M, Iwai, H.
登録日2022-01-14
公開日2022-03-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Basis for the Propagation of Homing Endonuclease-Associated Inteins.
Front Mol Biosci, 9, 2022
7QSS
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BU of 7qss by Molmil
Crystal structure of homing endonuclease-associated TliVMA intein (C1A)
分子名称: FORMIC ACID, V-type ATP synthase alpha chain
著者Beyer, H.M, Iwai, H.
登録日2022-01-14
公開日2022-03-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Structural Basis for the Propagation of Homing Endonuclease-Associated Inteins.
Front Mol Biosci, 9, 2022
7QIL
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BU of 7qil by Molmil
Solution NMR structure of halophilic DnaE intein
分子名称: DnaE intein
著者Heikkinen, H.A, Aranko, S.A, Iwai, H.
登録日2021-12-15
公開日2022-04-27
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献The NMR structure of the engineered halophilic DnaE intein for segmental isotopic labeling using conditional protein splicing.
J.Magn.Reson., 338, 2022
1KP5
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BU of 1kp5 by Molmil
Cyclic Green Fluorescent Protein
分子名称: Green Fluorescent Protein, SULFATE ION
著者Hofmann, A, Iwai, H, Plueckthun, A, Wlodawer, A.
登録日2001-12-28
公開日2002-08-28
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of cyclized green fluorescent protein.
Acta Crystallogr.,Sect.D, 58, 2002
8BFG
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BU of 8bfg by Molmil
Solution structure of human apo/Calmodulin G113R (G114R)
分子名称: Calmodulin-1
著者Wimmer, R, Holler, C.V, Petersson, N.M, Brohus, M.B, Niemelae, M, Overgaard, M.T, Iwai, H.
登録日2022-10-25
公開日2023-10-04
最終更新日2024-01-17
実験手法SOLUTION NMR
主引用文献Allosteric changes in protein stability and dynamics as pathogenic mechanism for calmodulin variants not affecting Ca 2+ coordinating residues.
Cell Calcium, 117, 2023
8BD2
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BU of 8bd2 by Molmil
Calcium-bound Calmodulin variant G113R
分子名称: CALCIUM ION, Calmodulin-3
著者Wimmer, R, Holler, C.V, Petersson, N.M, Iwai, H, Niemelae, M.A, Brohus, M, Overgaard, M.T.
登録日2022-10-18
公開日2023-11-08
最終更新日2024-01-17
実験手法SOLUTION NMR
主引用文献Allosteric changes in protein stability and dynamics as pathogenic mechanism for calmodulin variants not affecting Ca 2+ coordinating residues.
Cell Calcium, 117, 2023
6FIP
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BU of 6fip by Molmil
Solution NMR structure of Pseudomonas aeruginosa TonB CTD
分子名称: Protein TonB
著者Oeemig, J.S, Samuli Ollila, O.H, Heikkinen, H.A, Iwai, H.
登録日2018-01-19
公開日2018-08-29
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献NMR structure of the C-terminal domain of TonB protein fromPseudomonas aeruginosa.
PeerJ, 6, 2018
6FFQ
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BU of 6ffq by Molmil
Solution NMR structure of CBM64 from S.thermophila
分子名称: Glycosyl hydrolase family 5 cellulase CBM64
著者Heikkinen, H.A, Iwai, H.
登録日2018-01-09
公開日2019-01-30
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献NMR Structure Determinations of Small Proteins Using only One Fractionally 20% 13 C- and Uniformly 100% 15 N-Labeled Sample.
Molecules, 26, 2021
6FFU
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BU of 6ffu by Molmil
Solution NMR structure of CBM64 from S.thermophila using 20% 13C, 100% 15N
分子名称: Glycosyl hydrolase family 5 cellulase CBM64
著者Heikkinen, H.A, Iwai, H.
登録日2018-01-09
公開日2019-01-30
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献NMR Structure Determinations of Small Proteins Using only One Fractionally 20% 13 C- and Uniformly 100% 15 N-Labeled Sample.
Molecules, 26, 2021
6QAZ
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BU of 6qaz by Molmil
Crystal structure of gp41-1 intein
分子名称: CITRATE ANION, DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, ...
著者Mikula, K.M, Beyer, H.M, Li, M, Wlodawer, A, Iwai, H.
登録日2018-12-20
公開日2019-11-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献The crystal structure of the naturally split gp41-1 intein guides the engineering of orthogonal split inteins from cis-splicing inteins.
Febs J., 287, 2020
4KL6
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BU of 4kl6 by Molmil
Crystal structure of dimeric form of NpuDnaE intein
分子名称: DNA-directed DNA polymerase,Nucleic acid binding, OB-fold, tRNA/helicase-type
著者Aranko, A.S, Oeemig, J.S, Kajander, T, Iwai, H.
登録日2013-05-07
公開日2013-09-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Intermolecular domain swapping induces intein-mediated protein alternative splicing.
Nat.Chem.Biol., 9, 2013
6QKV
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BU of 6qkv by Molmil
Structure of YibK from P. aeruginosa
分子名称: GLYCEROL, SULFATE ION, tRNA (cytidine(34)-2'-O)-methyltransferase
著者Mikula, K.M, Tascon, I, Iwai, H.
登録日2019-01-30
公開日2020-02-19
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Tying up the Loose Ends: A Mathematically Knotted Protein.
Front Chem, 9, 2021
6QH8
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BU of 6qh8 by Molmil
Structure of knotted YibK from P. aeruginosa
分子名称: DI(HYDROXYETHYL)ETHER, SULFATE ION, tRNA (cytidine(34)-2'-O)-methyltransferase
著者Mikula, K.M, Tascon, I, Iwai, H.
登録日2019-01-16
公開日2020-07-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Tying up the Loose Ends: A Mathematically Knotted Protein.
Front Chem, 9, 2021
4KL5
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BU of 4kl5 by Molmil
Crystal structure of NpuDnaE intein
分子名称: CITRIC ACID, DNA polymerase III, alpha subunit, ...
著者Aranko, A.S, Oeemig, J.S, Kajander, T, Iwai, H.
登録日2013-05-07
公開日2013-09-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Intermolecular domain swapping induces intein-mediated protein alternative splicing.
Nat.Chem.Biol., 9, 2013
5O9J
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BU of 5o9j by Molmil
Crystal structure of transcription factor IIB Mja mini-intein
分子名称: 1,4-DIETHYLENE DIOXIDE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, AMMONIUM ION, ...
著者Mikula, K.M, Iwai, H, Zhou, D, Wlodawer, A.
登録日2017-06-19
公開日2017-11-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis for the Persistence of Homing Endonucleases in Transcription Factor IIB Inteins.
J. Mol. Biol., 429, 2017
5N2N
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BU of 5n2n by Molmil
Crystal structure of the receiver domain of the histidine kinase CKI1 from Arabidopsis thaliana complexed with Mg2+ and BeF3-
分子名称: BERYLLIUM TRIFLUORIDE ION, Histidine kinase CKI1, MAGNESIUM ION
著者Otrusinova, O, Demo, G, Padrta, P, Jasenakova, Z, Pekarova, B, Gelova, Z, Szmitkowska, A, Kaderavek, P, Jansen, S, Zachrdla, M, Klumpler, T, Marek, J, Hritz, J, Janda, L, Iwai, H, Wimmerova, M, Hejatko, J, Zidek, L.
登録日2017-02-08
公開日2017-09-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Conformational dynamics are a key factor in signaling mediated by the receiver domain of a sensor histidine kinase from Arabidopsis thaliana.
J. Biol. Chem., 292, 2017
1OAW
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BU of 1oaw by Molmil
OMEGA-AGATOXIN IVA
分子名称: OMEGA-AGATOXIN IVA
著者Kim, J.I, Konishi, S, Iwai, H, Kohno, T, Gouda, H, Shimada, I, Sato, K, Arata, Y.
登録日1995-06-28
公開日1995-10-15
最終更新日2024-10-09
実験手法SOLUTION NMR
主引用文献Three-dimensional solution structure of the calcium channel antagonist omega-agatoxin IVA: consensus molecular folding of calcium channel blockers.
J.Mol.Biol., 250, 1995
5LW8
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BU of 5lw8 by Molmil
NMR solution structure of Helicobacter pylori TonB-CTD (residues 194-285)
分子名称: Protein TonB
著者Ciragan, A, Aranko, A.S, Tascon, I, Iwai, H.
登録日2016-09-15
公開日2016-10-19
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Salt-inducible Protein Splicing in cis and trans by Inteins from Extremely Halophilic Archaea as a Novel Protein-Engineering Tool.
J.Mol.Biol., 428, 2016

 

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