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PDB: 199 件
2YVZ
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Crystal structure of magnesium transporter MgtE cytosolic domain, Mg2+-free form
分子名称: Mg2+ transporter MgtE
著者Hattori, M, Tanaka, Y, Fukai, S, Ishitani, R, Nureki, O.
登録日2007-04-18
公開日2007-09-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Crystal structure of the MgtE Mg(2+) transporter
Nature, 448, 2007
2YVY
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Crystal structure of magnesium transporter MgtE cytosolic domain, Mg2+ bound form
分子名称: MAGNESIUM ION, Mg2+ transporter MgtE
著者Hattori, M, Tanaka, Y, Fukai, S, Ishitani, R, Nureki, O.
登録日2007-04-18
公開日2007-09-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the MgtE Mg(2+) transporter
Nature, 448, 2007
2ZW9
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Crystal structure of tRNA wybutosine synthesizing enzyme TYW4
分子名称: Leucine carboxyl methyltransferase 2, S-ADENOSYLMETHIONINE
著者Suzuki, Y, Noma, A, Suzuki, T, Ishitani, R, Nureki, O.
登録日2008-12-01
公開日2009-06-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis of tRNA modification with CO2 fixation and methylation by wybutosine synthesizing enzyme TYW4.
Nucleic Acids Res., 37, 2009
2Z2U
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Crystal structure of archaeal TYW1
分子名称: UPF0026 protein MJ0257
著者Suzuki, Y, Ishitani, R, Nureki, O.
登録日2007-05-28
公開日2007-10-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of the Radical SAM Enzyme Catalyzing Tricyclic Modified Base Formation in tRNA
J.Mol.Biol., 372, 2007
3A1U
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BU of 3a1u by Molmil
Crystal structue of the cytosolic domain of T. maritima FeoB iron iransporter in GMPPNP form
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, Iron(II) transport protein B, MAGNESIUM ION, ...
著者Hattori, M, Ishitani, R, Nureki, O.
登録日2009-04-22
公開日2009-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis of novel interactions between the small-GTPase and GDI-like domains in prokaryotic FeoB iron transporter
Structure, 17, 2009
3A27
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Crystal structure of M. jannaschii TYW2 in complex with AdoMet
分子名称: S-ADENOSYLMETHIONINE, Uncharacterized protein MJ1557
著者Umitsu, M, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2009-04-28
公開日2009-09-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.005 Å)
主引用文献Structural basis of AdoMet-dependent aminocarboxypropyl transfer reaction catalyzed by tRNA-wybutosine synthesizing enzyme, TYW2
Proc.Natl.Acad.Sci.USA, 106, 2009
3A2K
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Crystal structure of TilS complexed with tRNA
分子名称: bacterial tRNA, tRNA(Ile)-lysidine synthase
著者Nakanishi, K, Bonnefond, L, Ishitani, R, Nureki, O.
登録日2009-05-23
公開日2009-10-20
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (3.65 Å)
主引用文献Structural basis for translational fidelity ensured by transfer RNA lysidine synthetase.
Nature, 461, 2009
3A1S
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Crystal structue of the cytosolic domain of T. maritima FeoB iron iransporter in GDP form I
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, GUANOSINE-5'-DIPHOSPHATE, ...
著者Hattori, M, Ishitani, R, Nureki, O.
登録日2009-04-22
公開日2009-09-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis of novel interactions between the small-GTPase and GDI-like domains in prokaryotic FeoB iron transporter
Structure, 17, 2009
3A26
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Crystal structure of P. horikoshii TYW2 in complex with MeSAdo
分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, TETRAETHYLENE GLYCOL, Uncharacterized protein PH0793
著者Umitsu, M, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2009-04-28
公開日2009-09-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis of AdoMet-dependent aminocarboxypropyl transfer reaction catalyzed by tRNA-wybutosine synthesizing enzyme, TYW2
Proc.Natl.Acad.Sci.USA, 106, 2009
2ZZT
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Crystal structure of the cytosolic domain of the cation diffusion facilitator family protein
分子名称: Putative uncharacterized protein, SULFATE ION
著者Higuchi, T, Hattori, M, Tanaka, Y, Ishitani, R, Nureki, O.
登録日2009-02-25
公開日2009-08-18
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.842 Å)
主引用文献Crystal structure of the cytosolic domain of the cation diffusion facilitator family protein
Proteins, 76, 2009
2ZZK
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Crystal structure of tRNA wybutosine synthesizing enzyme TYW4
分子名称: CITRIC ACID, Leucine carboxyl methyltransferase 2, TETRAETHYLENE GLYCOL
著者Suzuki, Y, Noma, A, Suzuki, T, Ishitani, R, Nureki, O.
登録日2009-02-17
公開日2009-06-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.706 Å)
主引用文献Structural basis of tRNA modification with CO2 fixation and methylation by wybutosine synthesizing enzyme TYW4.
Nucleic Acids Res., 37, 2009
3A1W
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Crystal structue of the G domain of T. maritima FeoB iron iransporter
分子名称: Iron(II) transport protein B, SULFATE ION
著者Hattori, M, Ishitani, R, Nureki, O.
登録日2009-04-22
公開日2009-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9001 Å)
主引用文献Structural basis of novel interactions between the small-GTPase and GDI-like domains in prokaryotic FeoB iron transporter
Structure, 17, 2009
3A25
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BU of 3a25 by Molmil
Crystal structure of P. horikoshii TYW2 in complex with AdoMet
分子名称: S-ADENOSYLMETHIONINE, Uncharacterized protein PH0793
著者Umitsu, M, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2009-04-28
公開日2009-09-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis of AdoMet-dependent aminocarboxypropyl transfer reaction catalyzed by tRNA-wybutosine synthesizing enzyme, TYW2
Proc.Natl.Acad.Sci.USA, 106, 2009
3A1V
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BU of 3a1v by Molmil
Crystal structue of the cytosolic domain of T. maritima FeoB iron iransporter in apo form
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Hattori, M, Ishitani, R, Nureki, O.
登録日2009-04-22
公開日2009-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis of novel interactions between the small-GTPase and GDI-like domains in prokaryotic FeoB iron transporter
Structure, 17, 2009
3AQP
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BU of 3aqp by Molmil
Crystal structure of SecDF, a translocon-associated membrane protein, from Thermus thrmophilus
分子名称: Probable SecDF protein-export membrane protein
著者Tsukazaki, T, Mori, H, Echizen, Y, Ishitani, R, Fukai, S, Tanaka, T, Perederina, A, Vassylyev, D.G, Kohno, T, Ito, K, Nureki, O.
登録日2010-11-16
公開日2011-05-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structure and function of a membrane component SecDF that enhances protein export
Nature, 474, 2011
3AGK
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BU of 3agk by Molmil
Crystal structure of archaeal translation termination factor, aRF1
分子名称: Peptide chain release factor subunit 1
著者Kobayashi, K, Kikuno, I, Ishitani, R, Ito, K, Nureki, O.
登録日2010-04-01
公開日2010-11-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Omnipotent role of archaeal elongation factor 1 alpha (EF1{alpha}) in translational elongation and termination, and quality control of protein synthesis
Proc.Natl.Acad.Sci.USA, 107, 2010
3AL6
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BU of 3al6 by Molmil
Crystal structure of Human TYW5
分子名称: 2-OXOGLUTARIC ACID, JmjC domain-containing protein C2orf60, NICKEL (II) ION
著者Kato, M, Araiso, Y, Ishitani, R, Nureki, O.
登録日2010-07-26
公開日2010-12-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of a novel JmjC-domain-containing protein, TYW5, involved in tRNA modification.
Nucleic Acids Res., 39, 2011
2ZNI
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BU of 2zni by Molmil
Crystal structure of Pyrrolysyl-tRNA synthetase-tRNA(Pyl) complex from Desulfitobacterium hafniense
分子名称: CALCIUM ION, Pyrrolysyl-tRNA synthetase, bacterial tRNA
著者Nozawa, K, Araiso, Y, Soll, D, Ishitani, R, Nureki, O.
登録日2008-04-25
公開日2008-12-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Pyrrolysyl-tRNA synthetase-tRNA(Pyl) structure reveals the molecular basis of orthogonality
Nature, 457, 2009
2ZNJ
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BU of 2znj by Molmil
Crystal structure of Pyrrolysyl-tRNA synthetase from Desulfitobacterium hafniense
分子名称: Putative uncharacterized protein
著者Nozawa, K, Araiso, Y, Soll, D, Ishitani, R, Nureki, O.
登録日2008-04-25
公開日2008-12-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Pyrrolysyl-tRNA synthetase-tRNA(Pyl) structure reveals the molecular basis of orthogonality
Nature, 457, 2009
2ZWA
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BU of 2zwa by Molmil
Crystal structure of tRNA wybutosine synthesizing enzyme TYW4
分子名称: 1,2-ETHANEDIOL, CITRIC ACID, Leucine carboxyl methyltransferase 2, ...
著者Suzuki, Y, Noma, A, Suzuki, T, Ishitani, R, Nureki, O.
登録日2008-12-01
公開日2009-06-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis of tRNA modification with CO2 fixation and methylation by wybutosine synthesizing enzyme TYW4.
Nucleic Acids Res., 37, 2009
3A1T
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BU of 3a1t by Molmil
Crystal structue of the cytosolic domain of T. maritima FeoB iron iransporter in GDP form II
分子名称: GUANOSINE-5'-DIPHOSPHATE, Iron(II) transport protein B
著者Hattori, M, Ishitani, R, Nureki, O.
登録日2009-04-22
公開日2009-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis of novel interactions between the small-GTPase and GDI-like domains in prokaryotic FeoB iron transporter
Structure, 17, 2009
2ZY9
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Improved crystal structure of magnesium transporter MgtE
分子名称: MAGNESIUM ION, Mg2+ transporter MgtE
著者Nureki, O, Ishitani, R, Hattori, M.
登録日2009-01-19
公開日2009-12-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Mg(2+)-dependent gating of bacterial MgtE channel underlies Mg(2+) homeostasis
Embo J., 28, 2009
3AII
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BU of 3aii by Molmil
Archaeal non-discriminating glutamyl-tRNA synthetase from Methanothermobacter thermautotrophicus
分子名称: 1,2-ETHANEDIOL, ACETIC ACID, CALCIUM ION, ...
著者Nureki, O, Ishitani, R.
登録日2010-05-14
公開日2010-08-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure of an archaeal non-discriminating glutamyl-tRNA synthetase: a missing link in the evolution of Gln-tRNAGln formation
Nucleic Acids Res., 2010
3AL5
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BU of 3al5 by Molmil
Crystal structure of Human TYW5
分子名称: JmjC domain-containing protein C2orf60, MAGNESIUM ION
著者Kato, M, Araiso, Y, Ishitani, R, Nureki, O.
登録日2010-07-26
公開日2010-11-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.503 Å)
主引用文献Crystal structure of a novel JmjC-domain-containing protein, TYW5, involved in tRNA modification.
Nucleic Acids Res., 39, 2011

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