2ROA
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![BU of 2roa by Molmil](/molmil-images/mine/2roa) | Solution structure of calcium bound soybean calmodulin isoform 4 N-terminal domain | Descriptor: | CALCIUM ION, Calmodulin | Authors: | Ishida, H, Huang, H, Yamniuk, A.P, Takaya, Y, Vogel, H.J. | Deposit date: | 2008-03-14 | Release date: | 2008-04-08 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | The solution structures of two soybean calmodulin isoforms provide a structural basis for their selective target activation properties J.Biol.Chem., 283, 2008
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2RO9
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![BU of 2ro9 by Molmil](/molmil-images/mine/2ro9) | Solution structure of calcium bound soybean calmodulin isoform 1 C-terminal domain | Descriptor: | CALCIUM ION, Calmodulin-2 | Authors: | Ishida, H, Huang, H, Yamniuk, A.P, Takaya, Y, Vogel, H.J. | Deposit date: | 2008-03-14 | Release date: | 2008-04-08 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | The solution structures of two soybean calmodulin isoforms provide a structural basis for their selective target activation properties J.Biol.Chem., 283, 2008
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2ROB
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![BU of 2rob by Molmil](/molmil-images/mine/2rob) | Solution structure of calcium bound soybean calmodulin isoform 4 C-terminal domain | Descriptor: | CALCIUM ION, Calmodulin | Authors: | Ishida, H, Huang, H, Yamniuk, A.P, Takaya, Y, Vogel, H.J. | Deposit date: | 2008-03-14 | Release date: | 2008-04-08 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | The solution structures of two soybean calmodulin isoforms provide a structural basis for their selective target activation properties J.Biol.Chem., 283, 2008
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2RO8
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![BU of 2ro8 by Molmil](/molmil-images/mine/2ro8) | Solution structure of calcium bound soybean calmodulin isoform 1 N-terminal domain | Descriptor: | CALCIUM ION, Calmodulin | Authors: | Ishida, H, Huang, H, Yamniuk, A.P, Takaya, Y, Vogel, H.J. | Deposit date: | 2008-03-14 | Release date: | 2008-04-08 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | The solution structures of two soybean calmodulin isoforms provide a structural basis for their selective target activation properties J.Biol.Chem., 283, 2008
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6CPI
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![BU of 6cpi by Molmil](/molmil-images/mine/6cpi) | Solution structure of SH3 domain from Shank1 | Descriptor: | SH3 and multiple ankyrin repeat domains protein 1 | Authors: | Ishida, H, Vogel, H.J. | Deposit date: | 2018-03-13 | Release date: | 2018-08-15 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Solution structures of the SH3 domains from Shank scaffold proteins and their interactions with Cav1.3 calcium channels. FEBS Lett., 592, 2018
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6CPK
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![BU of 6cpk by Molmil](/molmil-images/mine/6cpk) | Solution structure of SH3 domain from Shank3 | Descriptor: | SH3 and multiple ankyrin repeat domains protein 3 | Authors: | Ishida, H, Vogel, H.J. | Deposit date: | 2018-03-13 | Release date: | 2018-08-15 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Solution structures of the SH3 domains from Shank scaffold proteins and their interactions with Cav1.3 calcium channels. FEBS Lett., 592, 2018
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6CPJ
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![BU of 6cpj by Molmil](/molmil-images/mine/6cpj) | Solution structure of SH3 domain from Shank2 | Descriptor: | SH3 and multiple ankyrin repeat domains protein 2 | Authors: | Ishida, H, Vogel, H.J. | Deposit date: | 2018-03-13 | Release date: | 2018-08-15 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Solution structures of the SH3 domains from Shank scaffold proteins and their interactions with Cav1.3 calcium channels. FEBS Lett., 592, 2018
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2MQE
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![BU of 2mqe by Molmil](/molmil-images/mine/2mqe) | |
5JOL
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![BU of 5jol by Molmil](/molmil-images/mine/5jol) | Calcium-free EF-hand domain of L-plastin | Descriptor: | Plastin-2 | Authors: | Ishida, H, Jensen, K.V, Woodman, A.G, Hyndman, M.E, Vogel, H.J. | Deposit date: | 2016-05-02 | Release date: | 2017-04-19 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | The Calcium-Dependent Switch Helix of L-Plastin Regulates Actin Bundling. Sci Rep, 7, 2017
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5JOJ
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![BU of 5joj by Molmil](/molmil-images/mine/5joj) | Calcium-loaded EF-hand domain of L-plastin | Descriptor: | CALCIUM ION, Plastin-2 | Authors: | Ishida, H, Jensen, K.V, Woodman, G.W, Hyndman, M.E, Vogel, H.J. | Deposit date: | 2016-05-02 | Release date: | 2017-04-19 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | The Calcium-Dependent Switch Helix of L-Plastin Regulates Actin Bundling. Sci Rep, 7, 2017
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1LKJ
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![BU of 1lkj by Molmil](/molmil-images/mine/1lkj) | NMR Structure of Apo Calmodulin from Yeast Saccharomyces cerevisiae | Descriptor: | Calmodulin | Authors: | Ishida, H, Nakashima, K, Kumaki, Y, Nakata, M, Hikichi, K, Yazawa, M. | Deposit date: | 2002-04-25 | Release date: | 2003-04-29 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | The solution structure of apocalmodulin from Saccharomyces cerevisiae implies a mechanism for its unique Ca2+ binding property. Biochemistry, 41, 2002
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1F54
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![BU of 1f54 by Molmil](/molmil-images/mine/1f54) | SOLUTION STRUCTURE OF THE APO N-TERMINAL DOMAIN OF YEAST CALMODULIN | Descriptor: | CALMODULIN | Authors: | Ishida, H, Takahashi, K, Nakashima, K, Kumaki, Y, Nakata, M, Hikichi, K, Yazawa, M. | Deposit date: | 2000-06-13 | Release date: | 2003-07-15 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Solution Structures of the N-terminal Domain of Yeast Calmodulin:
Ca2+-Dependent Conformational Change and Its Functional Implication Biochemistry, 39, 2000
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1F55
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![BU of 1f55 by Molmil](/molmil-images/mine/1f55) | SOLUTION STRUCTURE OF THE CALCIUM BOUND N-TERMINAL DOMAIN OF YEAST CALMODULIN | Descriptor: | CALCIUM ION, CALMODULIN | Authors: | Ishida, H, Takahashi, K, Nakashima, K, Kumaki, Y, Nakata, M, Hikichi, K, Yazawa, M. | Deposit date: | 2000-06-13 | Release date: | 2003-07-15 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Solution Structures of the N-terminal Domain of Yeast Calmodulin:
Ca2+-Dependent Conformational Change and Its Functional Implication Biochemistry, 39, 2000
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2JV9
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![BU of 2jv9 by Molmil](/molmil-images/mine/2jv9) | |
2KN2
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![BU of 2kn2 by Molmil](/molmil-images/mine/2kn2) | |
2L1W
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![BU of 2l1w by Molmil](/molmil-images/mine/2l1w) | |
2K3S
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![BU of 2k3s by Molmil](/molmil-images/mine/2k3s) | HADDOCK-derived structure of the CH-domain of the smoothelin-like 1 complexed with the C-domain of apocalmodulin | Descriptor: | Calmodulin, Smoothelin-like protein 1 | Authors: | Ishida, H, Borman, M.A, Ostrander, J, Vogel, H.J, MacDonald, J.A. | Deposit date: | 2008-05-15 | Release date: | 2008-05-27 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | Solution structure of the calponin homology (CH) domain from the smoothelin-like 1 protein: a unique apocalmodulin-binding mode and the possible role of the C-terminal type-2 CH-domain in smooth muscle relaxation. J.Biol.Chem., 283, 2008
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5ZLN
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![BU of 5zln by Molmil](/molmil-images/mine/5zln) | Crystal structure of mouse TLR9 in complex with two DNAs (CpG DNA and TCGCCA DNA) | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DNA (5'-D(*AP*GP*GP*CP*GP*TP*TP*TP*TP*T)-3'), ... | Authors: | Ishida, H, Ohto, U, Shimizu, T. | Deposit date: | 2018-03-28 | Release date: | 2018-04-25 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Structural basis for species-specific activation of mouse Toll-like receptor 9 FEBS Lett., 592, 2018
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1NDH
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![BU of 1ndh by Molmil](/molmil-images/mine/1ndh) | |
1IV4
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![BU of 1iv4 by Molmil](/molmil-images/mine/1iv4) | Structure of 2C-Methyl-D-erythritol-2,4-cyclodiphosphate Synthase (bound form Substrate) | Descriptor: | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, CYTIDINE-5'-MONOPHOSPHATE, MAGNESIUM ION | Authors: | Kishida, H, Wada, T, Unzai, S, Kuzuyama, T, Terada, T, Sirouzu, M, Yokoyama, S, Tame, J.R.H, Park, S.-Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2002-03-11 | Release date: | 2002-09-11 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | Structure and catalytic mechanism of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MECDP) synthase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis. Acta Crystallogr.,Sect.D, 59, 2003
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1IV1
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![BU of 1iv1 by Molmil](/molmil-images/mine/1iv1) | Structure of 2C-Methyl-D-erythritol-2,4-cyclodiphosphate Synthase | Descriptor: | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | Authors: | Kishida, H, Wada, T, Unzai, S, Kuzuyama, T, Terada, T, Sirouzu, M, Yokoyama, S, Tame, J.R.H, Park, S.-Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2002-03-11 | Release date: | 2002-09-11 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Structure and catalytic mechanism of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MECDP) synthase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis. Acta Crystallogr.,Sect.D, 59, 2003
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1IV2
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![BU of 1iv2 by Molmil](/molmil-images/mine/1iv2) | Structure of 2C-Methyl-D-erythritol-2,4-cyclodiphosphate Synthase (bound form CDP) | Descriptor: | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION | Authors: | Kishida, H, Wada, T, Unzai, S, Kuzuyama, T, Terada, T, Sirouzu, M, Yokoyama, S, Tame, J.R.H, Park, S.-Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2002-03-11 | Release date: | 2002-09-11 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | Structure and catalytic mechanism of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MECDP) synthase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis. Acta Crystallogr.,Sect.D, 59, 2003
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1IV3
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![BU of 1iv3 by Molmil](/molmil-images/mine/1iv3) | Structure of 2C-Methyl-D-erythritol-2,4-cyclodiphosphate Synthase (bound form MG atoms) | Descriptor: | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, MAGNESIUM ION | Authors: | Kishida, H, Wada, T, Unzai, S, Kuzuyama, T, Terada, T, Sirouzu, M, Yokoyama, S, Tame, J.R.H, Park, S.-Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2002-03-11 | Release date: | 2002-09-11 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.52 Å) | Cite: | Structure and catalytic mechanism of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MECDP) synthase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis. Acta Crystallogr.,Sect.D, 59, 2003
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2EX2
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![BU of 2ex2 by Molmil](/molmil-images/mine/2ex2) | Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli | Descriptor: | GLYCEROL, Penicillin-binding protein 4 | Authors: | Kishida, H, Unzai, S, Roper, D.I, Lloyd, A, Park, S.-Y, Tame, J.R.H. | Deposit date: | 2005-11-07 | Release date: | 2006-06-13 | Last modified: | 2016-10-19 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, both in the native form and covalently linked to various antibiotics Biochemistry, 45, 2006
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2EXA
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![BU of 2exa by Molmil](/molmil-images/mine/2exa) | Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, complexed with FAROM | Descriptor: | (2R,5R)-2-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-5-[(2R)-tetrahydrofuran-2-yl]-2,5-dihydro-1,3-thiazole-4-carboxylic acid, GLYCEROL, Penicillin-binding protein 4 | Authors: | Kishida, H, Unzai, S, Roper, D.I, Lloyd, A, Park, S.-Y, Tame, J.R.H. | Deposit date: | 2005-11-08 | Release date: | 2006-06-13 | Last modified: | 2016-10-19 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, both in the native form and covalently linked to various antibiotics Biochemistry, 45, 2006
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